RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 ERVH48-1M5A8F1 160 aa9.47□□□□□ -0.89
PDGFC-201ENST00000274071 HDAC3O15379 428 aa9.47□□□□□ -0.89
PDGFC-201ENST00000274071 ALDH1A2O94788 518 aa9.47□□□□□ -0.89
PDGFC-201ENST00000274071 TTKP33981 857 aa9.47□□□□□ -0.89
PDGFC-201ENST00000274071 NAMPTP43490 491 aa9.47□□□□□ -0.89
PDGFC-201ENST00000274071 CLCQ05315 142 aa9.47□□□□□ -0.89
PDGFC-201ENST00000274071 GRB10Q13322 594 aa9.47□□□□□ -0.89
PDGFC-201ENST00000274071 ZNF846Q147U1 533 aa9.47□□□□□ -0.89
PDGFC-201ENST00000274071 PFKFB3Q16875 520 aaPredicted RBP9.47□□□□□ -0.89
PDGFC-201ENST00000274071 ABCB5Q2M3G0 1257 aa9.47□□□□□ -0.89
PDGFC-201ENST00000274071 EFHC2Q5JST6 749 aa9.47□□□□□ -0.89
PDGFC-201ENST00000274071 ZNF354CQ86Y25 554 aa9.47□□□□□ -0.89
PDGFC-201ENST00000274071 HERC6Q8IVU3 1022 aa9.47□□□□□ -0.89
PDGFC-201ENST00000274071 TMEM151BQ8IW70 566 aa9.47□□□□□ -0.89
PDGFC-201ENST00000274071 FAM47BQ8NA70 645 aa9.47□□□□□ -0.89
PDGFC-201ENST00000274071 BBOF1Q8ND07 529 aa9.47□□□□□ -0.89
PDGFC-201ENST00000274071 PSD4Q8NDX1 1056 aa9.47□□□□□ -0.89
PDGFC-201ENST00000274071 RASSF5Q8WWW0 418 aa9.47□□□□□ -0.89
PDGFC-201ENST00000274071 HERVK_113Q902F9 699 aa9.47□□□□□ -0.89
PDGFC-201ENST00000274071 LARP4BQ92615 738 aaKnown RBP9.47□□□□□ -0.89
PDGFC-201ENST00000274071 CALML4Q96GE6 196 aa9.47□□□□□ -0.89
PDGFC-201ENST00000274071 POLE4Q9NR33 117 aa9.47□□□□□ -0.89
PDGFC-201ENST00000274071 VANGL2Q9ULK5 521 aa9.47□□□□□ -0.89
PDGFC-201ENST00000274071 ATAD5Q96QE3 1844 aa9.46□□□□□ -0.89
PDGFC-201ENST00000274071 FADS2P1A8MWK0 482 aa9.46□□□□□ -0.89
PDGFC-201ENST00000274071 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.46□□□□□ -0.89
PDGFC-201ENST00000274071 DYRK3O43781 588 aa9.46□□□□□ -0.89
PDGFC-201ENST00000274071 ACAT1P24752 427 aaKnown RBP9.46□□□□□ -0.89
PDGFC-201ENST00000274071 PKLRP30613 574 aa9.46□□□□□ -0.89
PDGFC-201ENST00000274071 BCAMP50895 628 aa9.46□□□□□ -0.89
PDGFC-201ENST00000274071 POU6F2P78424 691 aaPredicted RBP9.46□□□□□ -0.89
PDGFC-201ENST00000274071 CHRNDQ07001 517 aa9.46□□□□□ -0.89
PDGFC-201ENST00000274071 ZFP1Q6P2D0 407 aa9.46□□□□□ -0.89
PDGFC-201ENST00000274071 FAM122CQ6P4D5 195 aa9.46□□□□□ -0.89
PDGFC-201ENST00000274071 ADGRD1Q6QNK2 874 aa9.46□□□□□ -0.89
PDGFC-201ENST00000274071 CYP20A1Q6UW02 462 aa9.46□□□□□ -0.89
PDGFC-201ENST00000274071 FRMD7Q6ZUT3 714 aa9.46□□□□□ -0.89
PDGFC-201ENST00000274071 KCTD20Q7Z5Y7 419 aa9.46□□□□□ -0.89
PDGFC-201ENST00000274071 ABHD11Q8NFV4 315 aa9.46□□□□□ -0.89
PDGFC-201ENST00000274071 TFB1MQ8WVM0 346 aaKnown RBP9.46□□□□□ -0.89
PDGFC-201ENST00000274071 KCNK16Q96T55 309 aa9.46□□□□□ -0.89
PDGFC-201ENST00000274071 C20orf27Q9GZN8 174 aa9.46□□□□□ -0.89
PDGFC-201ENST00000274071 NARFLQ9H6Q4 476 aa9.46□□□□□ -0.89
PDGFC-201ENST00000274071 SYTL2Q9HCH5 934 aa9.46□□□□□ -0.89
PDGFC-201ENST00000274071 TRIM39Q9HCM9 518 aa9.46□□□□□ -0.89
PDGFC-201ENST00000274071 POLMQ9NP87 494 aaPredicted RBP9.46□□□□□ -0.89
PDGFC-201ENST00000274071 ZHX2Q9Y6X8 837 aa9.46□□□□□ -0.89
PDGFC-201ENST00000274071 CNTNAP4Q9C0A0 1308 aa9.46□□□□□ -0.89
PDGFC-201ENST00000274071 LRP5O75197 1615 aa9.46□□□□□ -0.9
PDGFC-201ENST00000274071 PRSS51A0A1B0GVH4 220 aa9.46□□□□□ -0.9
PDGFC-201ENST00000274071 M0R2N6 131 aa9.46□□□□□ -0.9
PDGFC-201ENST00000274071 ACSL4O60488 711 aa9.46□□□□□ -0.9
PDGFC-201ENST00000274071 ZNF254O75437 659 aa9.46□□□□□ -0.9
PDGFC-201ENST00000274071 TNFAIP3P21580 790 aa9.46□□□□□ -0.9
PDGFC-201ENST00000274071 CALML3P27482 149 aa9.46□□□□□ -0.9
PDGFC-201ENST00000274071 SSTR3P32745 418 aaPredicted RBP9.46□□□□□ -0.9
PDGFC-201ENST00000274071 MSX2P35548 267 aaPredicted RBP9.46□□□□□ -0.9
PDGFC-201ENST00000274071 SOX5P35711 763 aa9.46□□□□□ -0.9
PDGFC-201ENST00000274071 IKBKEQ14164 716 aa9.46□□□□□ -0.9
PDGFC-201ENST00000274071 CCDC142Q17RM4 750 aa9.46□□□□□ -0.9
PDGFC-201ENST00000274071 CLEC16AQ2KHT3 1053 aa9.46□□□□□ -0.9
PDGFC-201ENST00000274071 ANO4Q32M45 955 aa9.46□□□□□ -0.9
PDGFC-201ENST00000274071 IFIT1BQ5T764 474 aaKnown RBP9.46□□□□□ -0.9
PDGFC-201ENST00000274071 NDUFAF5Q5TEU4 345 aa9.46□□□□□ -0.9
PDGFC-201ENST00000274071 POTEAQ6S8J7 498 aa9.46□□□□□ -0.9
PDGFC-201ENST00000274071 UNC5AQ6ZN44 842 aa9.46□□□□□ -0.9
PDGFC-201ENST00000274071 ADAMTSL2Q86TH1 951 aa9.46□□□□□ -0.9
PDGFC-201ENST00000274071 SLC22A16Q86VW1 577 aa9.46□□□□□ -0.9
PDGFC-201ENST00000274071 EPS8L1Q8TE68 723 aa9.46□□□□□ -0.9
PDGFC-201ENST00000274071 BTBD6Q96KE9 485 aa9.46□□□□□ -0.9
PDGFC-201ENST00000274071 HERPUD2Q9BSE4 406 aa9.46□□□□□ -0.9
PDGFC-201ENST00000274071 MECRQ9BV79 373 aa9.46□□□□□ -0.9
PDGFC-201ENST00000274071 PPCSQ9HAB8 311 aa9.46□□□□□ -0.9
PDGFC-201ENST00000274071 MOCS1Q9NZB8 636 aa9.46□□□□□ -0.9
PDGFC-201ENST00000274071 NXF1Q9UBU9 619 aaKnown RBP9.46□□□□□ -0.9
PDGFC-201ENST00000274071 PTBP2Q9UKA9 531 aaKnown RBP9.46□□□□□ -0.9
PDGFC-201ENST00000274071 SPATA31A6Q5VVP1 1343 aa9.46□□□□□ -0.9
PDGFC-201ENST00000274071 A0A0B4J269 797 aa9.45□□□□□ -0.9
PDGFC-201ENST00000274071 I3L4J1 428 aa9.45□□□□□ -0.9
PDGFC-201ENST00000274071 EML1O00423 815 aa9.45□□□□□ -0.9
PDGFC-201ENST00000274071 GAS7O60861 476 aa9.45□□□□□ -0.9
PDGFC-201ENST00000274071 ZMPSTE24O75844 475 aa9.45□□□□□ -0.9
PDGFC-201ENST00000274071 ATP5BP06576 529 aaKnown RBP9.45□□□□□ -0.9
PDGFC-201ENST00000274071 OR52Z1P0C646 297 aa9.45□□□□□ -0.9
PDGFC-201ENST00000274071 ICAM2P13598 275 aa9.45□□□□□ -0.9
PDGFC-201ENST00000274071 MAN1A1P33908 653 aa9.45□□□□□ -0.9
PDGFC-201ENST00000274071 CENPCQ03188 943 aa9.45□□□□□ -0.9
PDGFC-201ENST00000274071 TUBB3Q13509 450 aa9.45□□□□□ -0.9
PDGFC-201ENST00000274071 PPP2R5DQ14738 602 aa9.45□□□□□ -0.9
PDGFC-201ENST00000274071 CAND1Q86VP6 1230 aaKnown RBP9.45□□□□□ -0.9
PDGFC-201ENST00000274071 FBXL6Q8N531 539 aa9.45□□□□□ -0.9
PDGFC-201ENST00000274071 PNMA5Q96PV4 448 aa9.45□□□□□ -0.9
PDGFC-201ENST00000274071 CITED4Q96RK1 184 aa9.45□□□□□ -0.9
PDGFC-201ENST00000274071 IL12RB2Q99665 862 aa9.45□□□□□ -0.9
PDGFC-201ENST00000274071 FAM118BQ9BPY3 351 aa9.45□□□□□ -0.9
PDGFC-201ENST00000274071 TMEM121Q9BTD3 319 aa9.45□□□□□ -0.9
PDGFC-201ENST00000274071 MXD3Q9BW11 206 aa9.45□□□□□ -0.9
PDGFC-201ENST00000274071 KCTD10Q9H3F6 313 aa9.45□□□□□ -0.9
PDGFC-201ENST00000274071 ARMT1Q9H993 441 aa9.45□□□□□ -0.9
PDGFC-201ENST00000274071 POLR1BQ9H9Y6 1135 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms