RNA–Protein interactions for RNA: ENST00000273317.4

LIMD1-201, Transcript of LIM domains containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD1, Length 11,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-201ENST00000273317 NFICP08651 508 aa8.16□□□□□ -1.1
LIMD1-201ENST00000273317 SLC26A2P50443 739 aa8.16□□□□□ -1.1
LIMD1-201ENST00000273317 ADAM33Q9BZ11 813 aa8.16□□□□□ -1.1
LIMD1-201ENST00000273317 MEI4A8MW99 385 aa8.16□□□□□ -1.1
LIMD1-201ENST00000273317 MSH4O15457 936 aa8.16□□□□□ -1.1
LIMD1-201ENST00000273317 HMBSP08397 361 aa8.16□□□□□ -1.1
LIMD1-201ENST00000273317 IRF1P10914 325 aa8.16□□□□□ -1.1
LIMD1-201ENST00000273317 ACAP1Q15027 740 aa8.16□□□□□ -1.1
LIMD1-201ENST00000273317 SNX30Q5VWJ9 437 aa8.16□□□□□ -1.1
LIMD1-201ENST00000273317 PEG10Q86TG7 708 aaKnown RBP8.16□□□□□ -1.1
LIMD1-201ENST00000273317 ADHFE1Q8IWW8 467 aa8.16□□□□□ -1.1
LIMD1-201ENST00000273317 FIG4Q92562 907 aa8.16□□□□□ -1.1
LIMD1-201ENST00000273317 NSMCE2Q96MF7 247 aa8.16□□□□□ -1.1
LIMD1-201ENST00000273317 Q96MT0 163 aa8.16□□□□□ -1.1
LIMD1-201ENST00000273317 KIFC1Q9BW19 673 aa8.16□□□□□ -1.1
LIMD1-201ENST00000273317 ARHGAP28Q9P2N2 729 aa8.16□□□□□ -1.1
LIMD1-201ENST00000273317 CROTQ9UKG9 612 aa8.16□□□□□ -1.1
LIMD1-201ENST00000273317 A0A087X0T9 212 aa8.16□□□□□ -1.1
LIMD1-201ENST00000273317 FAM228BP0C875 321 aa8.16□□□□□ -1.1
LIMD1-201ENST00000273317 NEK3P51956 506 aa8.16□□□□□ -1.1
LIMD1-201ENST00000273317 STX4Q12846 297 aa8.16□□□□□ -1.1
LIMD1-201ENST00000273317 STYK1Q6J9G0 422 aa8.16□□□□□ -1.1
LIMD1-201ENST00000273317 ZNF605Q86T29 641 aa8.16□□□□□ -1.1
LIMD1-201ENST00000273317 STK32AQ8WU08 396 aa8.16□□□□□ -1.1
LIMD1-201ENST00000273317 CCDC3Q9BQI4 270 aa8.16□□□□□ -1.1
LIMD1-201ENST00000273317 JMJD4Q9H9V9 463 aa8.16□□□□□ -1.1
LIMD1-201ENST00000273317 GPAMQ9HCL2 828 aa8.16□□□□□ -1.1
LIMD1-201ENST00000273317 ABI2Q9NYB9 513 aaPredicted RBP8.16□□□□□ -1.1
LIMD1-201ENST00000273317 SPATA2Q9UM82 520 aa8.16□□□□□ -1.1
LIMD1-201ENST00000273317 TEX28O15482 410 aa8.16□□□□□ -1.1
LIMD1-201ENST00000273317 CETPP11597 493 aa8.16□□□□□ -1.1
LIMD1-201ENST00000273317 NDUFAF6Q330K2 333 aa8.16□□□□□ -1.1
LIMD1-201ENST00000273317 ERMARDQ5T6L9 678 aa8.16□□□□□ -1.1
LIMD1-201ENST00000273317 LLGL2Q6P1M3 1020 aa8.16□□□□□ -1.1
LIMD1-201ENST00000273317 STK40Q8N2I9 435 aa8.16□□□□□ -1.1
LIMD1-201ENST00000273317 TBC1D16Q8TBP0 767 aa8.16□□□□□ -1.1
LIMD1-201ENST00000273317 PROX1Q92786 737 aa8.16□□□□□ -1.1
LIMD1-201ENST00000273317 SGF29Q96ES7 293 aa8.16□□□□□ -1.1
LIMD1-201ENST00000273317 RAB21Q9UL25 225 aa8.16□□□□□ -1.1
LIMD1-201ENST00000273317 FCHO1O14526 889 aa8.16□□□□□ -1.1
LIMD1-201ENST00000273317 MYL4P12829 197 aa8.16□□□□□ -1.1
LIMD1-201ENST00000273317 EPB42P16452 691 aa8.16□□□□□ -1.1
LIMD1-201ENST00000273317 CHN2P52757 468 aa8.16□□□□□ -1.1
LIMD1-201ENST00000273317 SQLEQ14534 574 aa8.16□□□□□ -1.1
LIMD1-201ENST00000273317 NR6A1Q15406 480 aa8.16□□□□□ -1.1
LIMD1-201ENST00000273317 TRPC4APQ8TEL6 797 aa8.16□□□□□ -1.1
LIMD1-201ENST00000273317 AP3S1Q92572 193 aa8.16□□□□□ -1.1
LIMD1-201ENST00000273317 FAM210AQ96ND0 272 aa8.16□□□□□ -1.1
LIMD1-201ENST00000273317 KBTBD4Q9NVX7 518 aa8.16□□□□□ -1.1
LIMD1-201ENST00000273317 RPS6KA6Q9UK32 745 aa8.16□□□□□ -1.1
LIMD1-201ENST00000273317 ASS1P00966 412 aaKnown RBP8.15□□□□□ -1.1
LIMD1-201ENST00000273317 TSHRP16473 764 aa8.15□□□□□ -1.1
LIMD1-201ENST00000273317 NOS3P29474 1203 aa8.15□□□□□ -1.1
LIMD1-201ENST00000273317 SREBF1P36956 1147 aa8.15□□□□□ -1.1
LIMD1-201ENST00000273317 GRIK3Q13003 919 aa8.15□□□□□ -1.1
LIMD1-201ENST00000273317 ITIH5Q86UX2 942 aa8.15□□□□□ -1.1
LIMD1-201ENST00000273317 CACTIN-AS1Q8N1I8 211 aa8.15□□□□□ -1.1
LIMD1-201ENST00000273317 MTMR12Q9C0I1 747 aa8.15□□□□□ -1.1
LIMD1-201ENST00000273317 LIN7AO14910 233 aaPredicted RBP8.15□□□□□ -1.1
LIMD1-201ENST00000273317 RIPK2O43353 540 aa8.15□□□□□ -1.1
LIMD1-201ENST00000273317 PAEPP09466 180 aa8.15□□□□□ -1.1
LIMD1-201ENST00000273317 ME2P23368 584 aa8.15□□□□□ -1.1
LIMD1-201ENST00000273317 CYP2F1P24903 491 aa8.15□□□□□ -1.1
LIMD1-201ENST00000273317 GTF2E2P29084 291 aaKnown RBP8.15□□□□□ -1.1
LIMD1-201ENST00000273317 FLT3P36888 993 aa8.15□□□□□ -1.1
LIMD1-201ENST00000273317 NPY2RP49146 381 aa8.15□□□□□ -1.1
LIMD1-201ENST00000273317 PREPLQ4J6C6 727 aaPredicted RBP8.15□□□□□ -1.1
LIMD1-201ENST00000273317 DGKKQ5KSL6 1271 aa8.15□□□□□ -1.1
LIMD1-201ENST00000273317 TTI2Q6NXR4 508 aa8.15□□□□□ -1.1
LIMD1-201ENST00000273317 S100ZQ8WXG8 99 aa8.15□□□□□ -1.1
LIMD1-201ENST00000273317 SERAC1Q96JX3 654 aa8.15□□□□□ -1.1
LIMD1-201ENST00000273317 TBL1YQ9BQ87 522 aa8.15□□□□□ -1.1
LIMD1-201ENST00000273317 OSBPL6Q9BZF3 934 aa8.15□□□□□ -1.1
LIMD1-201ENST00000273317 ACTR8Q9H981 624 aa8.15□□□□□ -1.1
LIMD1-201ENST00000273317 GPRC5DQ9NZD1 345 aa8.15□□□□□ -1.1
LIMD1-201ENST00000273317 TNPO3Q9Y5L0 923 aaKnown RBP8.15□□□□□ -1.1
LIMD1-201ENST00000273317 CLUHO75153 1309 aa8.15□□□□□ -1.1
LIMD1-201ENST00000273317 RECQL5O94762 991 aaPredicted RBP8.15□□□□□ -1.1
LIMD1-201ENST00000273317 ABCB1P08183 1280 aaPredicted RBP8.15□□□□□ -1.1
LIMD1-201ENST00000273317 RAB27AP51159 221 aa8.15□□□□□ -1.1
LIMD1-201ENST00000273317 SLC45A4Q5BKX6 768 aa8.15□□□□□ -1.1
LIMD1-201ENST00000273317 NT5DC4Q86YG4 428 aa8.15□□□□□ -1.1
LIMD1-201ENST00000273317 NDUFAF1Q9Y375 327 aa8.15□□□□□ -1.1
LIMD1-201ENST00000273317 A0A088AWK7 358 aa8.15□□□□□ -1.1
LIMD1-201ENST00000273317 ERI2A8K979 691 aaKnown RBP8.15□□□□□ -1.1
LIMD1-201ENST00000273317 TSPAN19P0C672 248 aa8.15□□□□□ -1.1
LIMD1-201ENST00000273317 ZNF10P21506 573 aaPredicted RBP8.15□□□□□ -1.1
LIMD1-201ENST00000273317 HERVK_113P62684 666 aa8.15□□□□□ -1.1
LIMD1-201ENST00000273317 CDK16Q00536 496 aa8.15□□□□□ -1.1
LIMD1-201ENST00000273317 MGAT5BQ3V5L5 792 aa8.15□□□□□ -1.1
LIMD1-201ENST00000273317 ALFQ53S48 1182 aa8.15□□□□□ -1.1
LIMD1-201ENST00000273317 UBE2E3Q969T4 207 aa8.15□□□□□ -1.1
LIMD1-201ENST00000273317 CHORDC1Q9UHD1 332 aaPredicted RBP8.15□□□□□ -1.1
LIMD1-201ENST00000273317 GTF2A1LQ9UNN4 478 aa8.15□□□□□ -1.1
LIMD1-201ENST00000273317 RPL26L1Q9UNX3 145 aaKnown RBP8.15□□□□□ -1.1
LIMD1-201ENST00000273317 CYP1A1P04798 512 aaPredicted RBP8.15□□□□□ -1.1
LIMD1-201ENST00000273317 HNMTP50135 292 aa8.15□□□□□ -1.1
LIMD1-201ENST00000273317 LRRC71Q8N4P6 559 aa8.15□□□□□ -1.1
LIMD1-201ENST00000273317 UBA3Q8TBC4 463 aa8.15□□□□□ -1.1
LIMD1-201ENST00000273317 CHST12Q9NRB3 414 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms