RNA–Protein interactions for RNA: ENST00000267484.9

RTN1-201, Transcript of reticulon 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RTN1, Length 3,435 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-201ENST00000267484 IFT122Q9HBG6 1241 aa17.4■□□□□ 0.38
RTN1-201ENST00000267484 MKS1Q9NXB0 559 aa17.4■□□□□ 0.38
RTN1-201ENST00000267484 COX16Q9P0S2 106 aa17.4■□□□□ 0.38
RTN1-201ENST00000267484 PDP2Q9P2J9 529 aa17.4■□□□□ 0.38
RTN1-201ENST00000267484 TXNDC9O14530 226 aa17.4■□□□□ 0.38
RTN1-201ENST00000267484 DCXO43602 365 aa17.4■□□□□ 0.38
RTN1-201ENST00000267484 OPHN1O60890 802 aa17.4■□□□□ 0.38
RTN1-201ENST00000267484 VTNP04004 478 aa17.4■□□□□ 0.38
RTN1-201ENST00000267484 PGGT1BP53609 377 aa17.4■□□□□ 0.38
RTN1-201ENST00000267484 DLG1Q12959 904 aa17.4■□□□□ 0.38
RTN1-201ENST00000267484 MSLNQ13421 630 aaPredicted RBP17.4■□□□□ 0.38
RTN1-201ENST00000267484 CUL3Q13618 768 aa17.4■□□□□ 0.38
RTN1-201ENST00000267484 TMCO4Q5TGY1 634 aa17.4■□□□□ 0.38
RTN1-201ENST00000267484 HEATR6Q6AI08 1181 aaKnown RBP17.4■□□□□ 0.38
RTN1-201ENST00000267484 FRMD7Q6ZUT3 714 aa17.4■□□□□ 0.38
RTN1-201ENST00000267484 TRAPPC9Q96Q05 1148 aa17.4■□□□□ 0.38
RTN1-201ENST00000267484 ZNF112Q9UJU3 913 aa17.4■□□□□ 0.38
RTN1-201ENST00000267484 E9PBE3 544 aa17.4■□□□□ 0.38
RTN1-201ENST00000267484 KLHL41O60662 606 aa17.4■□□□□ 0.38
RTN1-201ENST00000267484 GOT1P17174 413 aa17.4■□□□□ 0.38
RTN1-201ENST00000267484 MAGEA6P43360 314 aa17.4■□□□□ 0.38
RTN1-201ENST00000267484 TMEM132DQ14C87 1099 aa17.4■□□□□ 0.38
RTN1-201ENST00000267484 STILQ15468 1287 aa17.4■□□□□ 0.38
RTN1-201ENST00000267484 CNPY1Q3B7I2 92 aa17.4■□□□□ 0.38
RTN1-201ENST00000267484 CDKL3Q8IVW4 592 aaPredicted RBP17.4■□□□□ 0.38
RTN1-201ENST00000267484 TP53INP2Q8IXH6 220 aa17.4■□□□□ 0.38
RTN1-201ENST00000267484 NR1H4Q96RI1 486 aaPredicted RBP17.4■□□□□ 0.38
RTN1-201ENST00000267484 FRMD8Q9BZ67 464 aaPredicted RBP17.4■□□□□ 0.38
RTN1-201ENST00000267484 DTLQ9NZJ0 730 aa17.4■□□□□ 0.38
RTN1-201ENST00000267484 MSX2P35548 267 aaPredicted RBP17.39■□□□□ 0.37
RTN1-201ENST00000267484 SLC6A3Q01959 620 aa17.39■□□□□ 0.37
RTN1-201ENST00000267484 GSTA3Q16772 222 aa17.39■□□□□ 0.37
RTN1-201ENST00000267484 PDPK2PQ6A1A2 396 aa17.39■□□□□ 0.37
RTN1-201ENST00000267484 ARCQ7LC44 396 aa17.39■□□□□ 0.37
RTN1-201ENST00000267484 CHST13Q8NET6 341 aa17.39■□□□□ 0.37
RTN1-201ENST00000267484 GDPD5Q8WTR4 605 aa17.39■□□□□ 0.37
RTN1-201ENST00000267484 LRRC39Q96DD0 335 aa17.39■□□□□ 0.37
RTN1-201ENST00000267484 FAM167AQ96KS9 214 aa17.39■□□□□ 0.37
RTN1-201ENST00000267484 KCTD15Q96SI1 283 aaPredicted RBP17.39■□□□□ 0.37
RTN1-201ENST00000267484 CPSF2Q9P2I0 782 aaKnown RBP17.39■□□□□ 0.37
RTN1-201ENST00000267484 SNX9Q9Y5X1 595 aa17.39■□□□□ 0.37
RTN1-201ENST00000267484 A6NJR5 290 aa17.39■□□□□ 0.37
RTN1-201ENST00000267484 LCP1P13796 627 aa17.39■□□□□ 0.37
RTN1-201ENST00000267484 KYAT3Q6YP21 454 aaKnown RBP17.39■□□□□ 0.37
RTN1-201ENST00000267484 TFB1MQ8WVM0 346 aaKnown RBP17.39■□□□□ 0.37
RTN1-201ENST00000267484 MTMR10Q9NXD2 777 aa17.39■□□□□ 0.37
RTN1-201ENST00000267484 HESX1Q9UBX0 185 aa17.39■□□□□ 0.37
RTN1-201ENST00000267484 CDH22Q9UJ99 828 aa17.39■□□□□ 0.37
RTN1-201ENST00000267484 AP4E1Q9UPM8 1137 aa17.39■□□□□ 0.37
RTN1-201ENST00000267484 USP12O75317 370 aa17.38■□□□□ 0.37
RTN1-201ENST00000267484 GCATO75600 419 aa17.38■□□□□ 0.37
RTN1-201ENST00000267484 GRIA2P42262 883 aa17.38■□□□□ 0.37
RTN1-201ENST00000267484 SERPINB9P50453 376 aa17.38■□□□□ 0.37
RTN1-201ENST00000267484 TRIP10Q15642 601 aa17.38■□□□□ 0.37
RTN1-201ENST00000267484 PDSS2Q86YH6 399 aa17.38■□□□□ 0.37
RTN1-201ENST00000267484 APLFQ8IW19 511 aaPredicted RBP17.38■□□□□ 0.37
RTN1-201ENST00000267484 KLRG1Q96E93 195 aa17.38■□□□□ 0.37
RTN1-201ENST00000267484 ZNF670Q9BS34 389 aa17.38■□□□□ 0.37
RTN1-201ENST00000267484 C1orf21Q9H246 121 aa17.38■□□□□ 0.37
RTN1-201ENST00000267484 DPEP3Q9H4B8 488 aa17.38■□□□□ 0.37
RTN1-201ENST00000267484 PDZD7Q9H5P4 517 aa17.38■□□□□ 0.37
RTN1-201ENST00000267484 DPP3Q9NY33 737 aa17.38■□□□□ 0.37
RTN1-201ENST00000267484 DOCK1Q14185 1865 aa17.38■□□□□ 0.37
RTN1-201ENST00000267484 ITGA2BP08514 1039 aa17.38■□□□□ 0.37
RTN1-201ENST00000267484 RAG1P15918 1043 aa17.38■□□□□ 0.37
RTN1-201ENST00000267484 SOWAHAQ2M3V2 549 aa17.38■□□□□ 0.37
RTN1-201ENST00000267484 FAM131BQ86XD5 332 aa17.38■□□□□ 0.37
RTN1-201ENST00000267484 PLD6Q8N2A8 252 aaKnown RBP17.38■□□□□ 0.37
RTN1-201ENST00000267484 COLGALT1Q8NBJ5 622 aa17.38■□□□□ 0.37
RTN1-201ENST00000267484 PPP2R3CQ969Q6 453 aa17.38■□□□□ 0.37
RTN1-201ENST00000267484 CSPG4P5Q96PW8 444 aa17.38■□□□□ 0.37
RTN1-201ENST00000267484 GPAMQ9HCL2 828 aa17.38■□□□□ 0.37
RTN1-201ENST00000267484 PDGFCQ9NRA1 345 aa17.38■□□□□ 0.37
RTN1-201ENST00000267484 SYBUQ9NX95 663 aa17.38■□□□□ 0.37
RTN1-201ENST00000267484 ZBTB14O43829 449 aa17.38■□□□□ 0.37
RTN1-201ENST00000267484 ARF4P18085 180 aaPredicted RBP17.38■□□□□ 0.37
RTN1-201ENST00000267484 ITGAXP20702 1163 aa17.38■□□□□ 0.37
RTN1-201ENST00000267484 DLG2Q15700 870 aa17.38■□□□□ 0.37
RTN1-201ENST00000267484 ARNTL2Q8WYA1 636 aa17.38■□□□□ 0.37
RTN1-201ENST00000267484 CYP3A43Q9HB55 503 aa17.38■□□□□ 0.37
RTN1-201ENST00000267484 STK32BQ9NY57 414 aa17.38■□□□□ 0.37
RTN1-201ENST00000267484 PPP1R1BQ9UD71 204 aaPredicted RBP17.38■□□□□ 0.37
RTN1-201ENST00000267484 POMPQ9Y244 141 aa17.38■□□□□ 0.37
RTN1-201ENST00000267484 GOLGA8QA0A0J9YX86 632 aa17.37■□□□□ 0.37
RTN1-201ENST00000267484 GOLGA8OA6NCC3 632 aa17.37■□□□□ 0.37
RTN1-201ENST00000267484 GOLGA8NF8WBI6 632 aa17.37■□□□□ 0.37
RTN1-201ENST00000267484 P4HA1P13674 534 aa17.37■□□□□ 0.37
RTN1-201ENST00000267484 EDNRBP24530 442 aa17.37■□□□□ 0.37
RTN1-201ENST00000267484 ADORA2BP29275 332 aa17.37■□□□□ 0.37
RTN1-201ENST00000267484 TYK2P29597 1187 aa17.37■□□□□ 0.37
RTN1-201ENST00000267484 ATXN3P54252 364 aaPredicted RBP17.37■□□□□ 0.37
RTN1-201ENST00000267484 NCBP2-AS2Q69YL0 99 aa17.37■□□□□ 0.37
RTN1-201ENST00000267484 MTHFD1LQ6UB35 978 aa17.37■□□□□ 0.37
RTN1-201ENST00000267484 KIF12Q96FN5 646 aa17.37■□□□□ 0.37
RTN1-201ENST00000267484 CAB39LQ9H9S4 337 aa17.37■□□□□ 0.37
RTN1-201ENST00000267484 FKBP6O75344 327 aa17.37■□□□□ 0.37
RTN1-201ENST00000267484 TPSB2P20231 275 aa17.37■□□□□ 0.37
RTN1-201ENST00000267484 NIPAL4Q0D2K0 466 aa17.37■□□□□ 0.37
RTN1-201ENST00000267484 TPSAB1Q15661 275 aa17.37■□□□□ 0.37
RTN1-201ENST00000267484 TBCCQ15814 346 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms