RNA–Protein interactions for RNA: ENST00000265077.7

VCAN-201, Transcript of versican, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VCAN, Length 12,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-201ENST00000265077 MARSP56192 900 aaKnown RBP5.84□□□□□ -1.47
VCAN-201ENST00000265077 EPS8Q12929 822 aa5.84□□□□□ -1.47
VCAN-201ENST00000265077 PDK2Q15119 407 aa5.84□□□□□ -1.47
VCAN-201ENST00000265077 NAPEPLDQ6IQ20 393 aa5.84□□□□□ -1.47
VCAN-201ENST00000265077 AGR3Q8TD06 166 aa5.84□□□□□ -1.47
VCAN-201ENST00000265077 CGREF1Q99674 301 aa5.84□□□□□ -1.47
VCAN-201ENST00000265077 SHCBP1LQ9BZQ2 653 aa5.84□□□□□ -1.47
VCAN-201ENST00000265077 ANKEF1Q9NU02 776 aa5.84□□□□□ -1.47
VCAN-201ENST00000265077 KBTBD4Q9NVX7 518 aa5.84□□□□□ -1.47
VCAN-201ENST00000265077 RAB26Q9ULW5 256 aa5.84□□□□□ -1.47
VCAN-201ENST00000265077 CENPBD1B2RD01 187 aa5.84□□□□□ -1.47
VCAN-201ENST00000265077 TRIM49D1C9J1S8 452 aa5.84□□□□□ -1.47
VCAN-201ENST00000265077 FOXN3O00409 490 aaPredicted RBP5.84□□□□□ -1.47
VCAN-201ENST00000265077 RAD17O75943 681 aa5.84□□□□□ -1.47
VCAN-201ENST00000265077 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.84□□□□□ -1.47
VCAN-201ENST00000265077 ZNF544Q6NX49 715 aa5.84□□□□□ -1.47
VCAN-201ENST00000265077 CCDC81Q6ZN84 652 aa5.84□□□□□ -1.47
VCAN-201ENST00000265077 C19orf60Q96EN9 201 aa5.84□□□□□ -1.47
VCAN-201ENST00000265077 SIPA1Q96FS4 1042 aa5.84□□□□□ -1.47
VCAN-201ENST00000265077 TBATAQ96M53 351 aa5.84□□□□□ -1.47
VCAN-201ENST00000265077 NIF3L1Q9GZT8 377 aa5.84□□□□□ -1.47
VCAN-201ENST00000265077 CLK4Q9HAZ1 481 aaKnown RBP5.84□□□□□ -1.47
VCAN-201ENST00000265077 ZNF510Q9Y2H8 683 aa5.84□□□□□ -1.47
VCAN-201ENST00000265077 CAPN6Q9Y6Q1 641 aa5.84□□□□□ -1.47
VCAN-201ENST00000265077 PTPRMP28827 1452 aa5.84□□□□□ -1.47
VCAN-201ENST00000265077 FAM95CA0A1B0GW59 222 aa5.84□□□□□ -1.47
VCAN-201ENST00000265077 C5orf60A6NFR6 353 aa5.84□□□□□ -1.47
VCAN-201ENST00000265077 MYBP10242 640 aa5.84□□□□□ -1.47
VCAN-201ENST00000265077 NME3Q13232 169 aa5.84□□□□□ -1.47
VCAN-201ENST00000265077 DIP2AQ14689 1571 aa5.84□□□□□ -1.47
VCAN-201ENST00000265077 PKN2Q16513 984 aaKnown RBP5.84□□□□□ -1.47
VCAN-201ENST00000265077 EXD1Q8NHP7 514 aa5.84□□□□□ -1.47
VCAN-201ENST00000265077 PTPRUQ92729 1446 aa5.84□□□□□ -1.47
VCAN-201ENST00000265077 ASIC4Q96FT7 647 aa5.84□□□□□ -1.47
VCAN-201ENST00000265077 DCUN1D1Q96GG9 259 aa5.84□□□□□ -1.47
VCAN-201ENST00000265077 OXNAD1Q96HP4 312 aaPredicted RBP5.84□□□□□ -1.47
VCAN-201ENST00000265077 RIT2Q99578 217 aa5.84□□□□□ -1.47
VCAN-201ENST00000265077 DBNDD1Q9H9R9 158 aa5.84□□□□□ -1.47
VCAN-201ENST00000265077 EFCAB1Q9HAE3 211 aa5.84□□□□□ -1.47
VCAN-201ENST00000265077 AP4B1Q9Y6B7 739 aa5.84□□□□□ -1.47
VCAN-201ENST00000265077 ALPK2Q86TB3 2170 aa5.84□□□□□ -1.48
VCAN-201ENST00000265077 ZBTB39O15060 712 aa5.84□□□□□ -1.48
VCAN-201ENST00000265077 ZNF862O60290 1169 aa5.84□□□□□ -1.48
VCAN-201ENST00000265077 USP12O75317 370 aa5.84□□□□□ -1.48
VCAN-201ENST00000265077 PABPC4LP0CB38 370 aaKnown RBP5.84□□□□□ -1.48
VCAN-201ENST00000265077 PTGER2P43116 358 aa5.84□□□□□ -1.48
VCAN-201ENST00000265077 KCNJ1P48048 391 aa5.84□□□□□ -1.48
VCAN-201ENST00000265077 GPAT2Q6NUI2 795 aa5.84□□□□□ -1.48
VCAN-201ENST00000265077 RTL3Q8N8U3 475 aaKnown RBP5.84□□□□□ -1.48
VCAN-201ENST00000265077 TPK1Q9H3S4 243 aa5.84□□□□□ -1.48
VCAN-201ENST00000265077 SMARCAD1Q9H4L7 1026 aa5.84□□□□□ -1.48
VCAN-201ENST00000265077 PRMT7Q9NVM4 692 aaPredicted RBP5.84□□□□□ -1.48
VCAN-201ENST00000265077 FARP1Q9Y4F1 1045 aaPredicted RBP5.84□□□□□ -1.48
VCAN-201ENST00000265077 NNMTP40261 264 aa5.84□□□□□ -1.48
VCAN-201ENST00000265077 HERVK_113P62684 666 aa5.84□□□□□ -1.48
VCAN-201ENST00000265077 RHAGQ02094 409 aa5.84□□□□□ -1.48
VCAN-201ENST00000265077 CHRNB3Q05901 458 aa5.84□□□□□ -1.48
VCAN-201ENST00000265077 TP53BP2Q13625 1128 aa5.84□□□□□ -1.48
VCAN-201ENST00000265077 PPP2R2DQ66LE6 453 aa5.84□□□□□ -1.48
VCAN-201ENST00000265077 SYTL1Q8IYJ3 562 aa5.84□□□□□ -1.48
VCAN-201ENST00000265077 SPERTQ8NA61 448 aa5.84□□□□□ -1.48
VCAN-201ENST00000265077 OR7A2PQ8NGA2 310 aa5.84□□□□□ -1.48
VCAN-201ENST00000265077 DIS3LQ8TF46 1054 aaKnown RBP5.84□□□□□ -1.48
VCAN-201ENST00000265077 DLG3Q92796 817 aa5.84□□□□□ -1.48
VCAN-201ENST00000265077 SNX13Q9Y5W8 968 aa5.84□□□□□ -1.48
VCAN-201ENST00000265077 KRT87PA6NCN2 255 aa5.83□□□□□ -1.48
VCAN-201ENST00000265077 DFFAO00273 331 aa5.83□□□□□ -1.48
VCAN-201ENST00000265077 CD4P01730 458 aa5.83□□□□□ -1.48
VCAN-201ENST00000265077 TRIM23P36406 574 aa5.83□□□□□ -1.48
VCAN-201ENST00000265077 STAT5BP51692 787 aa5.83□□□□□ -1.48
VCAN-201ENST00000265077 P3H2Q8IVL5 708 aa5.83□□□□□ -1.48
VCAN-201ENST00000265077 C8orf48Q96LL4 319 aa5.83□□□□□ -1.48
VCAN-201ENST00000265077 DRG1Q9Y295 367 aaKnown RBP5.83□□□□□ -1.48
VCAN-201ENST00000265077 FER1L4A9Z1Z3 1794 aa5.83□□□□□ -1.48
VCAN-201ENST00000265077 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.83□□□□□ -1.48
VCAN-201ENST00000265077 ATP9BO43861 1147 aa5.83□□□□□ -1.48
VCAN-201ENST00000265077 CAMTA2O94983 1202 aa5.83□□□□□ -1.48
VCAN-201ENST00000265077 SLC9A1P19634 815 aa5.83□□□□□ -1.48
VCAN-201ENST00000265077 SNAP25P60880 206 aa5.83□□□□□ -1.48
VCAN-201ENST00000265077 NFX1Q12986 1120 aaKnown RBP5.83□□□□□ -1.48
VCAN-201ENST00000265077 CYP4X1Q8N118 509 aa5.83□□□□□ -1.48
VCAN-201ENST00000265077 SHCBP1Q8NEM2 672 aa5.83□□□□□ -1.48
VCAN-201ENST00000265077 SPATA33Q96N06 139 aa5.83□□□□□ -1.48
VCAN-201ENST00000265077 AGAP3Q96P47 875 aa5.83□□□□□ -1.48
VCAN-201ENST00000265077 THAP2Q9H0W7 228 aa5.83□□□□□ -1.48
VCAN-201ENST00000265077 EPB41L1Q9H4G0 881 aa5.83□□□□□ -1.48
VCAN-201ENST00000265077 NDFIP2Q9NV92 336 aa5.83□□□□□ -1.48
VCAN-201ENST00000265077 ING4Q9UNL4 249 aa5.83□□□□□ -1.48
VCAN-201ENST00000265077 SULT1B1O43704 296 aa5.83□□□□□ -1.48
VCAN-201ENST00000265077 LSM8O95777 96 aaKnown RBP5.83□□□□□ -1.48
VCAN-201ENST00000265077 PDGFRAP16234 1089 aa5.83□□□□□ -1.48
VCAN-201ENST00000265077 ADORA2BP29275 332 aa5.83□□□□□ -1.48
VCAN-201ENST00000265077 TCF7P36402 384 aaPredicted RBP5.83□□□□□ -1.48
VCAN-201ENST00000265077 RXRGP48443 463 aa5.83□□□□□ -1.48
VCAN-201ENST00000265077 MSLNQ13421 630 aaPredicted RBP5.83□□□□□ -1.48
VCAN-201ENST00000265077 DCAF4L1Q3SXM0 396 aa5.83□□□□□ -1.48
VCAN-201ENST00000265077 UGT3A1Q6NUS8 523 aa5.83□□□□□ -1.48
VCAN-201ENST00000265077 TAF2Q6P1X5 1199 aa5.83□□□□□ -1.48
VCAN-201ENST00000265077 C16orf86Q6ZW13 317 aa5.83□□□□□ -1.48
VCAN-201ENST00000265077 ANKS3Q6ZW76 656 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms