RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 ERI2A8K979 691 aaKnown RBP17.15■□□□□ 0.34
PHRF1-201ENST00000264555 LRG1P02750 347 aa17.15■□□□□ 0.34
PHRF1-201ENST00000264555 HSPA1AP0DMV8 641 aaKnown RBP17.15■□□□□ 0.34
PHRF1-201ENST00000264555 HSPA1BP0DMV9 641 aaKnown RBP17.15■□□□□ 0.34
PHRF1-201ENST00000264555 ILF2Q12905 390 aaKnown RBP17.15■□□□□ 0.34
PHRF1-201ENST00000264555 POLD3Q15054 466 aaPredicted RBP17.15■□□□□ 0.34
PHRF1-201ENST00000264555 IFNEQ86WN2 208 aa17.15■□□□□ 0.34
PHRF1-201ENST00000264555 SYTL2Q9HCH5 934 aa17.15■□□□□ 0.34
PHRF1-201ENST00000264555 SYCE1LA8MT33 242 aa17.15■□□□□ 0.34
PHRF1-201ENST00000264555 MBL2P11226 248 aaPredicted RBP17.15■□□□□ 0.34
PHRF1-201ENST00000264555 ACADSP16219 412 aa17.15■□□□□ 0.34
PHRF1-201ENST00000264555 KCNA3P22001 575 aa17.15■□□□□ 0.34
PHRF1-201ENST00000264555 BDNFP23560 247 aa17.15■□□□□ 0.34
PHRF1-201ENST00000264555 SPIRE1Q08AE8 756 aa17.15■□□□□ 0.34
PHRF1-201ENST00000264555 GJC2Q5T442 439 aaPredicted RBP17.15■□□□□ 0.34
PHRF1-201ENST00000264555 KYAT3Q6YP21 454 aaKnown RBP17.15■□□□□ 0.34
PHRF1-201ENST00000264555 NTPCRQ9BSD7 190 aaKnown RBP17.15■□□□□ 0.34
PHRF1-201ENST00000264555 SIX2Q9NPC8 291 aa17.15■□□□□ 0.34
PHRF1-201ENST00000264555 RNF19AQ9NV58 838 aa17.15■□□□□ 0.34
PHRF1-201ENST00000264555 PIH1D1Q9NWS0 290 aaKnown RBP17.15■□□□□ 0.34
PHRF1-201ENST00000264555 SETD1AO15047 1707 aaKnown RBP17.15■□□□□ 0.34
PHRF1-201ENST00000264555 DCDC2CA8MYV0 355 aa17.15■□□□□ 0.34
PHRF1-201ENST00000264555 USP2O75604 605 aaPredicted RBP17.15■□□□□ 0.34
PHRF1-201ENST00000264555 RHOCP08134 193 aa17.15■□□□□ 0.34
PHRF1-201ENST00000264555 TTLL9Q3SXZ7 439 aa17.15■□□□□ 0.34
PHRF1-201ENST00000264555 PIGZQ86VD9 579 aa17.15■□□□□ 0.34
PHRF1-201ENST00000264555 KIF17Q9P2E2 1029 aa17.15■□□□□ 0.34
PHRF1-201ENST00000264555 LOC102724159A0A0B4J2E5 919 aa17.15■□□□□ 0.34
PHRF1-201ENST00000264555 ZNF862O60290 1169 aa17.15■□□□□ 0.34
PHRF1-201ENST00000264555 RAMP2O60895 175 aa17.15■□□□□ 0.34
PHRF1-201ENST00000264555 MLH1P40692 756 aa17.15■□□□□ 0.34
PHRF1-201ENST00000264555 ATXN3P54252 364 aaPredicted RBP17.15■□□□□ 0.34
PHRF1-201ENST00000264555 MRPS35P82673 323 aaKnown RBP17.15■□□□□ 0.34
PHRF1-201ENST00000264555 MAP2K5Q13163 448 aa17.15■□□□□ 0.34
PHRF1-201ENST00000264555 GTF2H3Q13889 308 aa17.15■□□□□ 0.34
PHRF1-201ENST00000264555 PWP2Q15269 919 aaKnown RBP17.15■□□□□ 0.34
PHRF1-201ENST00000264555 SCARA3Q6AZY7 606 aa17.15■□□□□ 0.34
PHRF1-201ENST00000264555 APOL5Q9BWW9 433 aa17.15■□□□□ 0.34
PHRF1-201ENST00000264555 CYP2C18P33260 490 aa17.14■□□□□ 0.33
PHRF1-201ENST00000264555 CDK7P50613 346 aa17.14■□□□□ 0.33
PHRF1-201ENST00000264555 PRKAA2P54646 552 aa17.14■□□□□ 0.33
PHRF1-201ENST00000264555 CYLC2Q14093 348 aaPredicted RBP17.14■□□□□ 0.33
PHRF1-201ENST00000264555 MON1BQ7L1V2 547 aa17.14■□□□□ 0.33
PHRF1-201ENST00000264555 SZRD1Q7Z422 152 aa17.14■□□□□ 0.33
PHRF1-201ENST00000264555 PALB2Q86YC2 1186 aa17.14■□□□□ 0.33
PHRF1-201ENST00000264555 SHISA4Q96DD7 197 aa17.14■□□□□ 0.33
PHRF1-201ENST00000264555 MTIF3Q9H2K0 278 aaKnown RBP17.14■□□□□ 0.33
PHRF1-201ENST00000264555 ABCC13Q9NSE7 274 aa17.14■□□□□ 0.33
PHRF1-201ENST00000264555 SNX3O60493 162 aa17.14■□□□□ 0.33
PHRF1-201ENST00000264555 ATP6V1G2O95670 118 aa17.14■□□□□ 0.33
PHRF1-201ENST00000264555 DDX5P17844 614 aaKnown RBP17.14■□□□□ 0.33
PHRF1-201ENST00000264555 CSHL1Q14406 222 aa17.14■□□□□ 0.33
PHRF1-201ENST00000264555 LAYNQ6UX15 382 aa17.14■□□□□ 0.33
PHRF1-201ENST00000264555 ILDR2Q71H61 639 aa17.14■□□□□ 0.33
PHRF1-201ENST00000264555 STARD13Q9Y3M8 1113 aa17.14■□□□□ 0.33
PHRF1-201ENST00000264555 FSBPO95073 299 aa17.14■□□□□ 0.33
PHRF1-201ENST00000264555 ITGA9Q13797 1035 aa17.14■□□□□ 0.33
PHRF1-201ENST00000264555 ASTE1Q2TB18 679 aaPredicted RBP17.14■□□□□ 0.33
PHRF1-201ENST00000264555 AMIGO3Q86WK7 504 aa17.14■□□□□ 0.33
PHRF1-201ENST00000264555 OXNAD1Q96HP4 312 aaPredicted RBP17.14■□□□□ 0.33
PHRF1-201ENST00000264555 CDH9Q9ULB4 789 aa17.14■□□□□ 0.33
PHRF1-201ENST00000264555 A0A096LPK6 155 aa17.14■□□□□ 0.33
PHRF1-201ENST00000264555 TRIM13O60858 407 aa17.14■□□□□ 0.33
PHRF1-201ENST00000264555 ERBB2P04626 1255 aa17.14■□□□□ 0.33
PHRF1-201ENST00000264555 ATP5BP06576 529 aaKnown RBP17.14■□□□□ 0.33
PHRF1-201ENST00000264555 YWHAQP27348 245 aa17.14■□□□□ 0.33
PHRF1-201ENST00000264555 CRYBB1P53674 252 aaPredicted RBP17.14■□□□□ 0.33
PHRF1-201ENST00000264555 INHBEP58166 350 aa17.14■□□□□ 0.33
PHRF1-201ENST00000264555 MRPS6P82932 125 aaKnown RBP17.14■□□□□ 0.33
PHRF1-201ENST00000264555 PRAMEF19Q5SWL8 479 aa17.14■□□□□ 0.33
PHRF1-201ENST00000264555 TMEM154Q6P9G4 183 aa17.14■□□□□ 0.33
PHRF1-201ENST00000264555 SLC22A9Q8IVM8 553 aa17.14■□□□□ 0.33
PHRF1-201ENST00000264555 TUBGCP3Q96CW5 907 aa17.14■□□□□ 0.33
PHRF1-201ENST00000264555 ADGRE3Q9BY15 652 aa17.14■□□□□ 0.33
PHRF1-201ENST00000264555 EFR3BQ9Y2G0 817 aa17.14■□□□□ 0.33
PHRF1-201ENST00000264555 SERPINF2P08697 491 aa17.13■□□□□ 0.33
PHRF1-201ENST00000264555 CRABP2P29373 138 aa17.13■□□□□ 0.33
PHRF1-201ENST00000264555 HADHBP55084 474 aaKnown RBP17.13■□□□□ 0.33
PHRF1-201ENST00000264555 MRPS31Q92665 395 aaKnown RBP17.13■□□□□ 0.33
PHRF1-201ENST00000264555 ADAM2Q99965 735 aa17.13■□□□□ 0.33
PHRF1-201ENST00000264555 CYP4F12Q9HCS2 524 aa17.13■□□□□ 0.33
PHRF1-201ENST00000264555 OR12D3Q9UGF7 316 aa17.13■□□□□ 0.33
PHRF1-201ENST00000264555 ANKRD6Q9Y2G4 727 aa17.13■□□□□ 0.33
PHRF1-201ENST00000264555 FCHO1O14526 889 aa17.13■□□□□ 0.33
PHRF1-201ENST00000264555 ALOX15BO15296 676 aa17.13■□□□□ 0.33
PHRF1-201ENST00000264555 SCNN1GP51170 649 aa17.13■□□□□ 0.33
PHRF1-201ENST00000264555 MMRN1Q13201 1228 aa17.13■□□□□ 0.33
PHRF1-201ENST00000264555 SLC51AQ86UW1 340 aa17.13■□□□□ 0.33
PHRF1-201ENST00000264555 SNX31Q8N9S9 440 aa17.13■□□□□ 0.33
PHRF1-201ENST00000264555 ZNF333Q96JL9 665 aa17.13■□□□□ 0.33
PHRF1-201ENST00000264555 C12orf42Q96LP6 360 aa17.13■□□□□ 0.33
PHRF1-201ENST00000264555 TBL1YQ9BQ87 522 aa17.13■□□□□ 0.33
PHRF1-201ENST00000264555 HEATR9A2RTY3 570 aa17.13■□□□□ 0.33
PHRF1-201ENST00000264555 DDHD2O94830 711 aa17.13■□□□□ 0.33
PHRF1-201ENST00000264555 RTN3O95197 1032 aaPredicted RBP17.13■□□□□ 0.33
PHRF1-201ENST00000264555 FLT3P36888 993 aa17.13■□□□□ 0.33
PHRF1-201ENST00000264555 PRKAA1Q13131 559 aa17.13■□□□□ 0.33
PHRF1-201ENST00000264555 CYTH1Q15438 398 aa17.13■□□□□ 0.33
PHRF1-201ENST00000264555 DUSP28Q4G0W2 176 aa17.13■□□□□ 0.33
PHRF1-201ENST00000264555 PTAR1Q7Z6K3 402 aaPredicted RBP17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms