RNA–Protein interactions for RNA: ENST00000263102.6

CCDC6-201, Transcript of coiled-coil domain containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC6, Length 5,811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-201ENST00000263102 CELF4Q9BZC1 486 aaKnown RBP15.23■□□□□ 0.03
CCDC6-201ENST00000263102 ELOVL2Q9NXB9 296 aa15.23■□□□□ 0.03
CCDC6-201ENST00000263102 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.23■□□□□ 0.03
CCDC6-201ENST00000263102 DRG1Q9Y295 367 aaKnown RBP15.23■□□□□ 0.03
CCDC6-201ENST00000263102 PNPLA7Q6ZV29 1317 aa15.23■□□□□ 0.03
CCDC6-201ENST00000263102 TBC1D3DA0A087WVF3 549 aa15.23■□□□□ 0.03
CCDC6-201ENST00000263102 TBC1D3IA0A087WXS9 549 aa15.23■□□□□ 0.03
CCDC6-201ENST00000263102 TBC1D3EA0A087X179 549 aa15.23■□□□□ 0.03
CCDC6-201ENST00000263102 TBC1D3KA0A087X1G2 549 aa15.23■□□□□ 0.03
CCDC6-201ENST00000263102 TBC1D3FA6NER0 549 aaPredicted RBP15.23■□□□□ 0.03
CCDC6-201ENST00000263102 TBC1D3LB9A6J9 549 aa15.23■□□□□ 0.03
CCDC6-201ENST00000263102 TBC1D3HP0C7X1 549 aa15.23■□□□□ 0.03
CCDC6-201ENST00000263102 C4BPBP20851 252 aa15.23■□□□□ 0.03
CCDC6-201ENST00000263102 MUTP22033 750 aa15.23■□□□□ 0.03
CCDC6-201ENST00000263102 HOXC12P31275 282 aa15.23■□□□□ 0.03
CCDC6-201ENST00000263102 TBC1D3GQ6DHY5 549 aa15.23■□□□□ 0.03
CCDC6-201ENST00000263102 TBC1D3CQ6IPX1 549 aa15.23■□□□□ 0.03
CCDC6-201ENST00000263102 IQCF2Q8IXL9 164 aa15.23■□□□□ 0.03
CCDC6-201ENST00000263102 TBC1D3Q8IZP1 549 aaPredicted RBP15.23■□□□□ 0.03
CCDC6-201ENST00000263102 ZSWIM2Q8NEG5 633 aa15.23■□□□□ 0.03
CCDC6-201ENST00000263102 CTTNBP2Q8WZ74 1663 aa15.23■□□□□ 0.03
CCDC6-201ENST00000263102 MCIDASD6RGH6 385 aa15.23■□□□□ 0.03
CCDC6-201ENST00000263102 TPD52L2O43399 206 aaKnown RBP15.23■□□□□ 0.03
CCDC6-201ENST00000263102 FAM20BO75063 409 aa15.23■□□□□ 0.03
CCDC6-201ENST00000263102 ADCYAP1R1P41586 468 aa15.23■□□□□ 0.03
CCDC6-201ENST00000263102 SARSP49591 514 aaKnown RBP15.23■□□□□ 0.03
CCDC6-201ENST00000263102 SEC13P55735 322 aa15.23■□□□□ 0.03
CCDC6-201ENST00000263102 ESRP1Q6NXG1 681 aaKnown RBP15.23■□□□□ 0.03
CCDC6-201ENST00000263102 C4orf22Q6V702 233 aa15.23■□□□□ 0.03
CCDC6-201ENST00000263102 ARL2BPQ9Y2Y0 163 aa15.23■□□□□ 0.03
CCDC6-201ENST00000263102 PRODHO43272 600 aa15.22■□□□□ 0.03
CCDC6-201ENST00000263102 KIF1CO43896 1103 aaKnown RBP15.22■□□□□ 0.03
CCDC6-201ENST00000263102 ZNF7P17097 686 aaPredicted RBP15.22■□□□□ 0.03
CCDC6-201ENST00000263102 BDNFP23560 247 aa15.22■□□□□ 0.03
CCDC6-201ENST00000263102 USP41Q3LFD5 358 aa15.22■□□□□ 0.03
CCDC6-201ENST00000263102 SHC4Q6S5L8 630 aa15.22■□□□□ 0.03
CCDC6-201ENST00000263102 ZNF677Q86XU0 584 aa15.22■□□□□ 0.03
CCDC6-201ENST00000263102 ARHGAP9Q9BRR9 750 aa15.22■□□□□ 0.03
CCDC6-201ENST00000263102 SLC4A5Q9BY07 1137 aa15.22■□□□□ 0.03
CCDC6-201ENST00000263102 SHOC2Q9UQ13 582 aa15.22■□□□□ 0.03
CCDC6-201ENST00000263102 ZNF500O60304 480 aaPredicted RBP15.22■□□□□ 0.03
CCDC6-201ENST00000263102 SPAG6O75602 509 aa15.22■□□□□ 0.03
CCDC6-201ENST00000263102 DNTTP04053 509 aa15.22■□□□□ 0.03
CCDC6-201ENST00000263102 MPOP05164 745 aa15.22■□□□□ 0.03
CCDC6-201ENST00000263102 ACVR2BQ13705 512 aa15.22■□□□□ 0.03
CCDC6-201ENST00000263102 ATP13A4Q4VNC1 1196 aa15.22■□□□□ 0.03
CCDC6-201ENST00000263102 ARMC12Q5T9G4 340 aa15.22■□□□□ 0.03
CCDC6-201ENST00000263102 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.22■□□□□ 0.03
CCDC6-201ENST00000263102 ARP10275 920 aa15.22■□□□□ 0.03
CCDC6-201ENST00000263102 ALX1Q15699 326 aa15.22■□□□□ 0.03
CCDC6-201ENST00000263102 SLC18A3Q16572 532 aa15.22■□□□□ 0.03
CCDC6-201ENST00000263102 SMU1Q2TAY7 513 aa15.22■□□□□ 0.03
CCDC6-201ENST00000263102 CCDC185Q8N715 623 aa15.22■□□□□ 0.03
CCDC6-201ENST00000263102 ATP6V1C2Q8NEY4 427 aa15.22■□□□□ 0.03
CCDC6-201ENST00000263102 ELMO3Q96BJ8 720 aa15.22■□□□□ 0.03
CCDC6-201ENST00000263102 SMARCD1Q96GM5 515 aa15.22■□□□□ 0.03
CCDC6-201ENST00000263102 TMEM176AQ96HP8 235 aa15.22■□□□□ 0.03
CCDC6-201ENST00000263102 DEFB118Q96PH6 123 aa15.22■□□□□ 0.03
CCDC6-201ENST00000263102 RAD21L1Q9H4I0 556 aa15.22■□□□□ 0.03
CCDC6-201ENST00000263102 SDR42E2A6NKP2 422 aa15.22■□□□□ 0.03
CCDC6-201ENST00000263102 TMEM114B3SHH9 223 aa15.22■□□□□ 0.03
CCDC6-201ENST00000263102 ZBTB14O43829 449 aa15.22■□□□□ 0.03
CCDC6-201ENST00000263102 RPL4P36578 427 aaKnown RBP15.22■□□□□ 0.03
CCDC6-201ENST00000263102 TUFMP49411 452 aaKnown RBP15.22■□□□□ 0.03
CCDC6-201ENST00000263102 PTSQ03393 145 aa15.22■□□□□ 0.03
CCDC6-201ENST00000263102 ZNF57Q68EA5 555 aaPredicted RBP15.22■□□□□ 0.03
CCDC6-201ENST00000263102 PROSER1Q86XN7 944 aa15.22■□□□□ 0.03
CCDC6-201ENST00000263102 TRIM66O15016 1216 aa15.21■□□□□ 0.03
CCDC6-201ENST00000263102 KRT6AP02538 564 aa15.21■□□□□ 0.03
CCDC6-201ENST00000263102 KRT6BP04259 564 aa15.21■□□□□ 0.03
CCDC6-201ENST00000263102 KRT6CP48668 564 aa15.21■□□□□ 0.03
CCDC6-201ENST00000263102 RCAN1P53805 252 aa15.21■□□□□ 0.03
CCDC6-201ENST00000263102 SP3Q02447 781 aa15.21■□□□□ 0.03
CCDC6-201ENST00000263102 C1DQ13901 141 aaKnown RBP15.21■□□□□ 0.03
CCDC6-201ENST00000263102 CCDC144BQ3MJ40 725 aa15.21■□□□□ 0.03
CCDC6-201ENST00000263102 ACAD10Q6JQN1 1059 aa15.21■□□□□ 0.03
CCDC6-201ENST00000263102 EMC1Q8N766 993 aa15.21■□□□□ 0.03
CCDC6-201ENST00000263102 ERP27Q96DN0 273 aa15.21■□□□□ 0.03
CCDC6-201ENST00000263102 A0A0B4J269 797 aa15.21■□□□□ 0.03
CCDC6-201ENST00000263102 CNOT3O75175 753 aaKnown RBP15.21■□□□□ 0.03
CCDC6-201ENST00000263102 PGK1P00558 417 aa15.21■□□□□ 0.03
CCDC6-201ENST00000263102 AGTP01019 485 aa15.21■□□□□ 0.03
CCDC6-201ENST00000263102 MYBL2P10244 700 aa15.21■□□□□ 0.03
CCDC6-201ENST00000263102 WASP42768 502 aa15.21■□□□□ 0.03
CCDC6-201ENST00000263102 POLR2LP62875 67 aaKnown RBP15.21■□□□□ 0.03
CCDC6-201ENST00000263102 GPAT3Q53EU6 434 aa15.21■□□□□ 0.03
CCDC6-201ENST00000263102 MFSD7Q6UXD7 560 aa15.21■□□□□ 0.03
CCDC6-201ENST00000263102 FBXO36Q8NEA4 188 aa15.21■□□□□ 0.03
CCDC6-201ENST00000263102 TBL1XO60907 577 aa15.21■□□□□ 0.03
CCDC6-201ENST00000263102 TFPIP10646 304 aa15.21■□□□□ 0.03
CCDC6-201ENST00000263102 ALAS2P22557 587 aa15.21■□□□□ 0.03
CCDC6-201ENST00000263102 RPA3P35244 121 aaPredicted RBP15.21■□□□□ 0.03
CCDC6-201ENST00000263102 DNAJC14Q6Y2X3 702 aaPredicted RBP15.21■□□□□ 0.03
CCDC6-201ENST00000263102 PEG10Q86TG7 708 aaKnown RBP15.21■□□□□ 0.03
CCDC6-201ENST00000263102 VANGL2Q9ULK5 521 aa15.21■□□□□ 0.03
CCDC6-201ENST00000263102 SLC9A3R1O14745 358 aaPredicted RBP15.21■□□□□ 0.03
CCDC6-201ENST00000263102 BIRC5O15392 142 aa15.21■□□□□ 0.03
CCDC6-201ENST00000263102 AVILO75366 819 aa15.21■□□□□ 0.03
CCDC6-201ENST00000263102 ATP6V1B1P15313 513 aa15.21■□□□□ 0.03
CCDC6-201ENST00000263102 HPCAL1P37235 193 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms