RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 MATKP42679 507 aa12.75□□□□□ -0.37
TRAF4-202ENST00000262396 PMS1P54277 932 aaKnown RBP12.75□□□□□ -0.37
TRAF4-202ENST00000262396 DAOAP59103 153 aa12.75□□□□□ -0.37
TRAF4-202ENST00000262396 GRIK2Q13002 908 aa12.75□□□□□ -0.37
TRAF4-202ENST00000262396 TRIP6Q15654 476 aaKnown RBP12.75□□□□□ -0.37
TRAF4-202ENST00000262396 CNGA2Q16280 664 aa12.75□□□□□ -0.37
TRAF4-202ENST00000262396 ZNF423Q2M1K9 1284 aa12.75□□□□□ -0.37
TRAF4-202ENST00000262396 COBLL1Q53SF7 1204 aa12.75□□□□□ -0.37
TRAF4-202ENST00000262396 RNF219Q5W0B1 726 aaPredicted RBP12.75□□□□□ -0.37
TRAF4-202ENST00000262396 LCLAT1Q6UWP7 414 aa12.75□□□□□ -0.37
TRAF4-202ENST00000262396 RRAGAQ7L523 313 aa12.75□□□□□ -0.37
TRAF4-202ENST00000262396 MFN1Q8IWA4 741 aa12.75□□□□□ -0.37
TRAF4-202ENST00000262396 CARNMT1Q8N4J0 409 aa12.75□□□□□ -0.37
TRAF4-202ENST00000262396 RBBP8NLQ8NC74 664 aaPredicted RBP12.75□□□□□ -0.37
TRAF4-202ENST00000262396 NELFBQ8WX92 580 aa12.75□□□□□ -0.37
TRAF4-202ENST00000262396 IRGQQ8WZA9 623 aa12.75□□□□□ -0.37
TRAF4-202ENST00000262396 SLC35C1Q96A29 364 aa12.75□□□□□ -0.37
TRAF4-202ENST00000262396 TIGD1Q96MW7 591 aa12.75□□□□□ -0.37
TRAF4-202ENST00000262396 TRIM62Q9BVG3 475 aa12.75□□□□□ -0.37
TRAF4-202ENST00000262396 USP36Q9P275 1121 aaKnown RBP12.75□□□□□ -0.37
TRAF4-202ENST00000262396 EIF2B4Q9UI10 523 aaKnown RBP12.75□□□□□ -0.37
TRAF4-202ENST00000262396 ZMIZ1Q9ULJ6 1067 aa12.75□□□□□ -0.37
TRAF4-202ENST00000262396 CLEC4EQ9ULY5 219 aa12.75□□□□□ -0.37
TRAF4-202ENST00000262396 CTNND2Q9UQB3 1225 aa12.75□□□□□ -0.37
TRAF4-202ENST00000262396 GTF3C3Q9Y5Q9 886 aa12.75□□□□□ -0.37
TRAF4-202ENST00000262396 FAM47DPA6NHR8 397 aa12.74□□□□□ -0.37
TRAF4-202ENST00000262396 METTL12A8MUP2 240 aa12.74□□□□□ -0.37
TRAF4-202ENST00000262396 BIN1O00499 593 aa12.74□□□□□ -0.37
TRAF4-202ENST00000262396 IRAK2O43187 625 aa12.74□□□□□ -0.37
TRAF4-202ENST00000262396 SART1O43290 800 aaKnown RBP12.74□□□□□ -0.37
TRAF4-202ENST00000262396 MED7O43513 233 aa12.74□□□□□ -0.37
TRAF4-202ENST00000262396 GNA14O95837 355 aa12.74□□□□□ -0.37
TRAF4-202ENST00000262396 MOCS2O96007 188 aaPredicted RBP12.74□□□□□ -0.37
TRAF4-202ENST00000262396 APOEP02649 317 aa12.74□□□□□ -0.37
TRAF4-202ENST00000262396 HOXD9P28356 352 aaPredicted RBP12.74□□□□□ -0.37
TRAF4-202ENST00000262396 CDH18Q13634 790 aa12.74□□□□□ -0.37
TRAF4-202ENST00000262396 SUZ12Q15022 739 aaKnown RBP12.74□□□□□ -0.37
TRAF4-202ENST00000262396 MBLAC2Q68D91 279 aa12.74□□□□□ -0.37
TRAF4-202ENST00000262396 RFWD3Q6PCD5 774 aa12.74□□□□□ -0.37
TRAF4-202ENST00000262396 PIP4P1Q86T03 277 aa12.74□□□□□ -0.37
TRAF4-202ENST00000262396 NAXDQ8IW45 347 aa12.74□□□□□ -0.37
TRAF4-202ENST00000262396 CHCHD4Q8N4Q1 142 aa12.74□□□□□ -0.37
TRAF4-202ENST00000262396 ZNF366Q8N895 744 aa12.74□□□□□ -0.37
TRAF4-202ENST00000262396 HJURPQ8NCD3 748 aaPredicted RBP12.74□□□□□ -0.37
TRAF4-202ENST00000262396 ENGASEQ8NFI3 743 aa12.74□□□□□ -0.37
TRAF4-202ENST00000262396 ZCCHC14Q8WYQ9 949 aaKnown RBP12.74□□□□□ -0.37
TRAF4-202ENST00000262396 RNF34Q969K3 372 aa12.74□□□□□ -0.37
TRAF4-202ENST00000262396 HSFY1Q96LI6 401 aa12.74□□□□□ -0.37
TRAF4-202ENST00000262396 SERPINB11Q96P15 392 aa12.74□□□□□ -0.37
TRAF4-202ENST00000262396 BTBD1Q9H0C5 482 aa12.74□□□□□ -0.37
TRAF4-202ENST00000262396 GAREM1Q9H706 876 aa12.74□□□□□ -0.37
TRAF4-202ENST00000262396 FBRSQ9HAH7 460 aa12.74□□□□□ -0.37
TRAF4-202ENST00000262396 DNAAF2Q9NVR5 837 aaKnown RBP12.74□□□□□ -0.37
TRAF4-202ENST00000262396 TJP2Q9UDY2 1190 aa12.74□□□□□ -0.37
TRAF4-202ENST00000262396 SLC12A6Q9UHW9 1150 aa12.74□□□□□ -0.37
TRAF4-202ENST00000262396 APOBEC2Q9Y235 224 aaKnown RBP12.74□□□□□ -0.37
TRAF4-202ENST00000262396 NEUROG3Q9Y4Z2 214 aa12.74□□□□□ -0.37
TRAF4-202ENST00000262396 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.74□□□□□ -0.37
TRAF4-202ENST00000262396 MYO18AQ92614 2054 aaKnown RBP12.74□□□□□ -0.37
TRAF4-202ENST00000262396 GON4LQ3T8J9 2241 aa12.73□□□□□ -0.37
TRAF4-202ENST00000262396 P4HA2O15460 535 aa12.73□□□□□ -0.37
TRAF4-202ENST00000262396 ACSL4O60488 711 aa12.73□□□□□ -0.37
TRAF4-202ENST00000262396 FSBPO95073 299 aa12.73□□□□□ -0.37
TRAF4-202ENST00000262396 AFPP02771 609 aaKnown RBP12.73□□□□□ -0.37
TRAF4-202ENST00000262396 DLDP09622 509 aaKnown RBP12.73□□□□□ -0.37
TRAF4-202ENST00000262396 HLA-FP30511 346 aa12.73□□□□□ -0.37
TRAF4-202ENST00000262396 NNMTP40261 264 aa12.73□□□□□ -0.37
TRAF4-202ENST00000262396 USP8P40818 1118 aa12.73□□□□□ -0.37
TRAF4-202ENST00000262396 ACADSBP45954 432 aa12.73□□□□□ -0.37
TRAF4-202ENST00000262396 STX17P56962 302 aa12.73□□□□□ -0.37
TRAF4-202ENST00000262396 ZNF776Q68DI1 518 aaPredicted RBP12.73□□□□□ -0.37
TRAF4-202ENST00000262396 PMF1Q6P1K2 205 aa12.73□□□□□ -0.37
TRAF4-202ENST00000262396 FAM217AQ8IXS0 508 aa12.73□□□□□ -0.37
TRAF4-202ENST00000262396 CAMK1GQ96NX5 476 aa12.73□□□□□ -0.37
TRAF4-202ENST00000262396 CD248Q9HCU0 757 aa12.73□□□□□ -0.37
TRAF4-202ENST00000262396 MAN1B1Q9UKM7 699 aa12.73□□□□□ -0.37
TRAF4-202ENST00000262396 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.73□□□□□ -0.37
TRAF4-202ENST00000262396 NFE2L3Q9Y4A8 694 aa12.73□□□□□ -0.37
TRAF4-202ENST00000262396 CHD8Q9HCK8 2581 aa12.73□□□□□ -0.37
TRAF4-202ENST00000262396 GOLGA6L7A0A1B0GV03 622 aa12.72□□□□□ -0.37
TRAF4-202ENST00000262396 GOLGA8CPA6NN73 597 aa12.72□□□□□ -0.37
TRAF4-202ENST00000262396 KCNJ18B7U540 433 aa12.72□□□□□ -0.37
TRAF4-202ENST00000262396 THAP12O43422 761 aa12.72□□□□□ -0.37
TRAF4-202ENST00000262396 LETM1O95202 739 aaPredicted RBP12.72□□□□□ -0.37
TRAF4-202ENST00000262396 SEMA4FO95754 770 aa12.72□□□□□ -0.37
TRAF4-202ENST00000262396 CD59P13987 128 aa12.72□□□□□ -0.37
TRAF4-202ENST00000262396 AFF3P51826 1226 aaKnown RBP12.72□□□□□ -0.37
TRAF4-202ENST00000262396 COPAP53621 1224 aa12.72□□□□□ -0.37
TRAF4-202ENST00000262396 C21orf59P57076 290 aa12.72□□□□□ -0.37
TRAF4-202ENST00000262396 ZBTB16Q05516 673 aa12.72□□□□□ -0.37
TRAF4-202ENST00000262396 KCNH2Q12809 1159 aa12.72□□□□□ -0.37
TRAF4-202ENST00000262396 PAK1Q13153 545 aa12.72□□□□□ -0.37
TRAF4-202ENST00000262396 TPD52L1Q16890 204 aaPredicted RBP12.72□□□□□ -0.37
TRAF4-202ENST00000262396 CCDC157Q569K6 752 aa12.72□□□□□ -0.37
TRAF4-202ENST00000262396 ZC3H3Q8IXZ2 948 aaKnown RBP12.72□□□□□ -0.37
TRAF4-202ENST00000262396 SCML4Q8N228 414 aa12.72□□□□□ -0.37
TRAF4-202ENST00000262396 EHBP1Q8NDI1 1231 aa12.72□□□□□ -0.37
TRAF4-202ENST00000262396 SLC35F5Q8WV83 523 aa12.72□□□□□ -0.37
TRAF4-202ENST00000262396 DNASE2BQ8WZ79 361 aa12.72□□□□□ -0.37
TRAF4-202ENST00000262396 TFAP2BQ92481 460 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms