RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 GIPC2Q8TF65 315 aa23.09■■□□□ 1.29
SIX3-201ENST00000260653 TMEM169Q96HH4 297 aa23.09■■□□□ 1.29
SIX3-201ENST00000260653 SPATA17Q96L03 361 aa23.09■■□□□ 1.29
SIX3-201ENST00000260653 EPAS1Q99814 870 aa23.09■■□□□ 1.29
SIX3-201ENST00000260653 SAYSD1Q9NPB0 183 aa23.09■■□□□ 1.29
SIX3-201ENST00000260653 ADAM21Q9UKJ8 722 aa23.09■■□□□ 1.29
SIX3-201ENST00000260653 BACE2Q9Y5Z0 518 aa23.09■■□□□ 1.29
SIX3-201ENST00000260653 PTPRSQ13332 1948 aa23.09■■□□□ 1.29
SIX3-201ENST00000260653 NDC80O14777 642 aa23.09■■□□□ 1.29
SIX3-201ENST00000260653 RTN3O95197 1032 aaPredicted RBP23.09■■□□□ 1.29
SIX3-201ENST00000260653 VAV1P15498 845 aa23.09■■□□□ 1.29
SIX3-201ENST00000260653 TAF10Q12962 218 aa23.09■■□□□ 1.29
SIX3-201ENST00000260653 FASTKD3Q14CZ7 662 aaKnown RBP23.09■■□□□ 1.29
SIX3-201ENST00000260653 PAK5Q9P286 719 aa23.09■■□□□ 1.29
SIX3-201ENST00000260653 EFCAB14O75071 495 aa23.08■■□□□ 1.29
SIX3-201ENST00000260653 CCR1P32246 355 aa23.08■■□□□ 1.29
SIX3-201ENST00000260653 HCAR3P49019 387 aa23.08■■□□□ 1.29
SIX3-201ENST00000260653 BRMS1LQ5PSV4 323 aa23.08■■□□□ 1.29
SIX3-201ENST00000260653 HOOK3Q86VS8 718 aa23.08■■□□□ 1.29
SIX3-201ENST00000260653 RELL1Q8IUW5 271 aa23.08■■□□□ 1.29
SIX3-201ENST00000260653 ARHGAP18Q8N392 663 aa23.08■■□□□ 1.29
SIX3-201ENST00000260653 TFB1MQ8WVM0 346 aaKnown RBP23.08■■□□□ 1.29
SIX3-201ENST00000260653 ATP6V1G3Q96LB4 118 aa23.08■■□□□ 1.29
SIX3-201ENST00000260653 CLSTN3Q9BQT9 956 aa23.08■■□□□ 1.29
SIX3-201ENST00000260653 SIK2Q9H0K1 926 aa23.08■■□□□ 1.29
SIX3-201ENST00000260653 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP23.08■■□□□ 1.28
SIX3-201ENST00000260653 EPHB2P29323 1055 aa23.08■■□□□ 1.28
SIX3-201ENST00000260653 MAGEA4P43358 317 aa23.08■■□□□ 1.28
SIX3-201ENST00000260653 HP1BP3Q5SSJ5 553 aaPredicted RBP23.08■■□□□ 1.28
SIX3-201ENST00000260653 FAXCQ5TGI0 409 aa23.08■■□□□ 1.28
SIX3-201ENST00000260653 HEATR6Q6AI08 1181 aaKnown RBP23.08■■□□□ 1.28
SIX3-201ENST00000260653 BZW1Q7L1Q6 419 aaKnown RBP23.08■■□□□ 1.28
SIX3-201ENST00000260653 CMTR2Q8IYT2 770 aaKnown RBP23.08■■□□□ 1.28
SIX3-201ENST00000260653 NPWQ8N729 165 aa23.08■■□□□ 1.28
SIX3-201ENST00000260653 COLGALT1Q8NBJ5 622 aa23.08■■□□□ 1.28
SIX3-201ENST00000260653 SERPINB11Q96P15 392 aa23.08■■□□□ 1.28
SIX3-201ENST00000260653 RAB6BQ9NRW1 208 aa23.08■■□□□ 1.28
SIX3-201ENST00000260653 PAGE1O75459 146 aa23.07■■□□□ 1.28
SIX3-201ENST00000260653 BANF1O75531 89 aa23.07■■□□□ 1.28
SIX3-201ENST00000260653 RPL10AP62906 217 aaKnown RBP23.07■■□□□ 1.28
SIX3-201ENST00000260653 MSANTD2Q6P1R3 559 aa23.07■■□□□ 1.28
SIX3-201ENST00000260653 YME1L1Q96TA2 773 aa23.07■■□□□ 1.28
SIX3-201ENST00000260653 XPO7Q9UIA9 1087 aaKnown RBP23.07■■□□□ 1.28
SIX3-201ENST00000260653 NUP205Q92621 2012 aa23.07■■□□□ 1.28
SIX3-201ENST00000260653 MTM1Q13496 603 aa23.07■■□□□ 1.28
SIX3-201ENST00000260653 HIF1AQ16665 826 aa23.07■■□□□ 1.28
SIX3-201ENST00000260653 RASIP1Q5U651 963 aa23.07■■□□□ 1.28
SIX3-201ENST00000260653 OSBPL2Q9H1P3 480 aa23.07■■□□□ 1.28
SIX3-201ENST00000260653 PRDM12Q9H4Q4 367 aa23.07■■□□□ 1.28
SIX3-201ENST00000260653 MYO18AQ92614 2054 aaKnown RBP23.06■■□□□ 1.28
SIX3-201ENST00000260653 SMIM23A6NLE4 172 aa23.06■■□□□ 1.28
SIX3-201ENST00000260653 HACD1B0YJ81 288 aa23.06■■□□□ 1.28
SIX3-201ENST00000260653 TBX18O95935 607 aa23.06■■□□□ 1.28
SIX3-201ENST00000260653 MOCS2O96007 188 aaPredicted RBP23.06■■□□□ 1.28
SIX3-201ENST00000260653 SRGAP2BP0DMP2 458 aa23.06■■□□□ 1.28
SIX3-201ENST00000260653 LAG3P18627 525 aa23.06■■□□□ 1.28
SIX3-201ENST00000260653 KCNJ11Q14654 390 aa23.06■■□□□ 1.28
SIX3-201ENST00000260653 C16orf59Q7L2K0 433 aa23.06■■□□□ 1.28
SIX3-201ENST00000260653 FAM76AQ8TAV0 307 aa23.06■■□□□ 1.28
SIX3-201ENST00000260653 HTR3CQ8WXA8 447 aa23.06■■□□□ 1.28
SIX3-201ENST00000260653 IL23AQ9NPF7 189 aa23.06■■□□□ 1.28
SIX3-201ENST00000260653 MAGED2Q9UNF1 606 aaPredicted RBP23.06■■□□□ 1.28
SIX3-201ENST00000260653 NEU3Q9UQ49 428 aa23.06■■□□□ 1.28
SIX3-201ENST00000260653 BAIAP3O94812 1187 aa23.06■■□□□ 1.28
SIX3-201ENST00000260653 GLUD2P49448 558 aa23.06■■□□□ 1.28
SIX3-201ENST00000260653 DSG1Q02413 1049 aa23.06■■□□□ 1.28
SIX3-201ENST00000260653 GABPB1Q06547 395 aaPredicted RBP23.06■■□□□ 1.28
SIX3-201ENST00000260653 AP1B1Q10567 949 aa23.06■■□□□ 1.28
SIX3-201ENST00000260653 EFEMP1Q12805 493 aa23.06■■□□□ 1.28
SIX3-201ENST00000260653 PPP2R5DQ14738 602 aa23.06■■□□□ 1.28
SIX3-201ENST00000260653 PDK1Q15118 436 aa23.06■■□□□ 1.28
SIX3-201ENST00000260653 PRKD1Q15139 912 aaPredicted RBP23.06■■□□□ 1.28
SIX3-201ENST00000260653 FNBP1LQ5T0N5 605 aa23.06■■□□□ 1.28
SIX3-201ENST00000260653 CEP128Q6ZU80 1094 aa23.06■■□□□ 1.28
SIX3-201ENST00000260653 EPS8L3Q8TE67 593 aaKnown RBP23.06■■□□□ 1.28
SIX3-201ENST00000260653 HAPLN3Q96S86 360 aa23.06■■□□□ 1.28
SIX3-201ENST00000260653 TLR8Q9NR97 1041 aaKnown RBP23.06■■□□□ 1.28
SIX3-201ENST00000260653 MTPAPQ9NVV4 582 aaKnown RBP eCLIP23.06■■□□□ 1.28
SIX3-201ENST00000260653 SLC38A8A6NNN8 435 aa23.05■■□□□ 1.28
SIX3-201ENST00000260653 PDIA2Q13087 525 aaKnown RBP23.05■■□□□ 1.28
SIX3-201ENST00000260653 MSS51Q4VC12 460 aa23.05■■□□□ 1.28
SIX3-201ENST00000260653 DNAJC21Q5F1R6 531 aaKnown RBP23.05■■□□□ 1.28
SIX3-201ENST00000260653 CENPUQ71F23 418 aa23.05■■□□□ 1.28
SIX3-201ENST00000260653 ZBED8Q8IZ13 594 aa23.05■■□□□ 1.28
SIX3-201ENST00000260653 CCNYQ8ND76 341 aa23.05■■□□□ 1.28
SIX3-201ENST00000260653 CLIC5Q9NZA1 410 aa23.05■■□□□ 1.28
SIX3-201ENST00000260653 TLR6Q9Y2C9 796 aa23.05■■□□□ 1.28
SIX3-201ENST00000260653 ZBBXA8MT70 800 aa23.05■■□□□ 1.28
SIX3-201ENST00000260653 GCATO75600 419 aa23.05■■□□□ 1.28
SIX3-201ENST00000260653 SEC24AO95486 1093 aa23.05■■□□□ 1.28
SIX3-201ENST00000260653 ZNF135P52742 658 aaPredicted RBP23.05■■□□□ 1.28
SIX3-201ENST00000260653 SKIDA1Q1XH10 827 aa23.05■■□□□ 1.28
SIX3-201ENST00000260653 FCRL2Q96LA5 508 aaPredicted RBP23.05■■□□□ 1.28
SIX3-201ENST00000260653 SPG21Q9NZD8 308 aa23.05■■□□□ 1.28
SIX3-201ENST00000260653 DYNC1LI1Q9Y6G9 523 aaKnown RBP23.05■■□□□ 1.28
SIX3-201ENST00000260653 KIAA1671Q9BY89 1806 aa23.04■■□□□ 1.28
SIX3-201ENST00000260653 TLDC2A0PJX2 215 aa23.04■■□□□ 1.28
SIX3-201ENST00000260653 KCNU1A8MYU2 1149 aa23.04■■□□□ 1.28
SIX3-201ENST00000260653 HMGB1P1B2RPK0 211 aaPredicted RBP23.04■■□□□ 1.28
SIX3-201ENST00000260653 TERF2Q15554 542 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms