RNA–Protein interactions for RNA: ENST00000258349.8

RC3H1-201, Transcript of ring finger and CCCH-type domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RC3H1, Length 10,988 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-201ENST00000258349 NYAP2Q9P242 653 aa4.91□□□□□ -1.62
RC3H1-201ENST00000258349 PHLPP1O60346 1717 aa4.91□□□□□ -1.62
RC3H1-201ENST00000258349 SPATA31A3Q5VYP0 1347 aa4.91□□□□□ -1.62
RC3H1-201ENST00000258349 NCF1BA6NI72 391 aaPredicted RBP4.91□□□□□ -1.62
RC3H1-201ENST00000258349 NCF1CA8MVU1 366 aaPredicted RBP4.91□□□□□ -1.62
RC3H1-201ENST00000258349 NCF1P14598 390 aaPredicted RBP4.91□□□□□ -1.62
RC3H1-201ENST00000258349 ACAT1P24752 427 aaKnown RBP4.91□□□□□ -1.62
RC3H1-201ENST00000258349 RGS21Q2M5E4 152 aa4.91□□□□□ -1.62
RC3H1-201ENST00000258349 CDKAL1Q5VV42 579 aa4.91□□□□□ -1.62
RC3H1-201ENST00000258349 TTC27Q6P3X3 843 aa4.91□□□□□ -1.62
RC3H1-201ENST00000258349 MZT2AQ6P582 158 aa4.91□□□□□ -1.62
RC3H1-201ENST00000258349 DHX30Q7L2E3 1194 aaKnown RBP eCLIP4.91□□□□□ -1.62
RC3H1-201ENST00000258349 ZCCHC7Q8N3Z6 543 aaKnown RBP4.91□□□□□ -1.62
RC3H1-201ENST00000258349 LENG1Q96BZ8 264 aaPredicted RBP4.91□□□□□ -1.62
RC3H1-201ENST00000258349 DCLK3Q9C098 648 aa4.91□□□□□ -1.62
RC3H1-201ENST00000258349 ELOVL6Q9H5J4 265 aa4.91□□□□□ -1.62
RC3H1-201ENST00000258349 IARS2Q9NSE4 1012 aaKnown RBP4.91□□□□□ -1.62
RC3H1-201ENST00000258349 UBAP1Q9NZ09 502 aa4.91□□□□□ -1.62
RC3H1-201ENST00000258349 LNPEPQ9UIQ6 1025 aa4.91□□□□□ -1.62
RC3H1-201ENST00000258349 ARIH1Q9Y4X5 557 aaPredicted RBP4.91□□□□□ -1.62
RC3H1-201ENST00000258349 FAM205CA6NFA0 338 aa4.91□□□□□ -1.62
RC3H1-201ENST00000258349 CLTBP09497 229 aa4.91□□□□□ -1.62
RC3H1-201ENST00000258349 CYP2C9P11712 490 aa4.91□□□□□ -1.62
RC3H1-201ENST00000258349 CYP2F1P24903 491 aa4.91□□□□□ -1.62
RC3H1-201ENST00000258349 NOS3P29474 1203 aa4.91□□□□□ -1.62
RC3H1-201ENST00000258349 NEK3P51956 506 aa4.91□□□□□ -1.62
RC3H1-201ENST00000258349 NEDD8Q15843 81 aa4.91□□□□□ -1.62
RC3H1-201ENST00000258349 TTI2Q6NXR4 508 aa4.91□□□□□ -1.62
RC3H1-201ENST00000258349 KRT77Q7Z794 578 aa4.91□□□□□ -1.62
RC3H1-201ENST00000258349 GMCL1P1Q8NEA9 526 aa4.91□□□□□ -1.62
RC3H1-201ENST00000258349 NARS2Q96I59 477 aaKnown RBP4.91□□□□□ -1.62
RC3H1-201ENST00000258349 WDR12Q9GZL7 423 aaKnown RBP4.91□□□□□ -1.62
RC3H1-201ENST00000258349 KBTBD4Q9NVX7 518 aa4.91□□□□□ -1.62
RC3H1-201ENST00000258349 DOLKQ9UPQ8 538 aa4.91□□□□□ -1.62
RC3H1-201ENST00000258349 DUOX1Q9NRD9 1551 aa4.91□□□□□ -1.62
RC3H1-201ENST00000258349 C1orf232A0A0U1RR37 186 aa4.91□□□□□ -1.62
RC3H1-201ENST00000258349 TAF4O00268 1085 aa4.91□□□□□ -1.62
RC3H1-201ENST00000258349 RAD51BO15315 384 aa4.91□□□□□ -1.62
RC3H1-201ENST00000258349 CHADO15335 359 aa4.91□□□□□ -1.62
RC3H1-201ENST00000258349 TBC1D12O60347 775 aa4.91□□□□□ -1.62
RC3H1-201ENST00000258349 SNAP91O60641 907 aa4.91□□□□□ -1.62
RC3H1-201ENST00000258349 RXRBP28702 533 aa4.91□□□□□ -1.62
RC3H1-201ENST00000258349 PIK3CGP48736 1102 aa4.91□□□□□ -1.62
RC3H1-201ENST00000258349 ACLYP53396 1101 aa4.91□□□□□ -1.62
RC3H1-201ENST00000258349 HMGCS2P54868 508 aa4.91□□□□□ -1.62
RC3H1-201ENST00000258349 ST3GAL1Q11201 340 aa4.91□□□□□ -1.62
RC3H1-201ENST00000258349 MSLNQ13421 630 aaPredicted RBP4.91□□□□□ -1.62
RC3H1-201ENST00000258349 SQLEQ14534 574 aa4.91□□□□□ -1.62
RC3H1-201ENST00000258349 SF3B3Q15393 1217 aaKnown RBP4.91□□□□□ -1.62
RC3H1-201ENST00000258349 DGKKQ5KSL6 1271 aa4.91□□□□□ -1.62
RC3H1-201ENST00000258349 CRELD2Q6UXH1 353 aaPredicted RBP4.91□□□□□ -1.62
RC3H1-201ENST00000258349 KCNMB4Q86W47 210 aa4.91□□□□□ -1.62
RC3H1-201ENST00000258349 GPRASP2Q96D09 838 aa4.91□□□□□ -1.62
RC3H1-201ENST00000258349 TPD52L3Q96J77 140 aa4.91□□□□□ -1.62
RC3H1-201ENST00000258349 CRAMP1Q96RY5 1269 aa4.91□□□□□ -1.62
RC3H1-201ENST00000258349 KLF6Q99612 283 aaPredicted RBP4.91□□□□□ -1.62
RC3H1-201ENST00000258349 AAASQ9NRG9 546 aa4.91□□□□□ -1.62
RC3H1-201ENST00000258349 CYP39A1Q9NYL5 469 aa4.91□□□□□ -1.62
RC3H1-201ENST00000258349 RPS6KA6Q9UK32 745 aa4.91□□□□□ -1.62
RC3H1-201ENST00000258349 INPP4BO15327 924 aa4.91□□□□□ -1.62
RC3H1-201ENST00000258349 SMNDC1O75940 238 aaKnown RBP eCLIP4.91□□□□□ -1.62
RC3H1-201ENST00000258349 SLC25A27O95847 323 aa4.91□□□□□ -1.62
RC3H1-201ENST00000258349 RPN2P04844 631 aa4.91□□□□□ -1.62
RC3H1-201ENST00000258349 IRF1P10914 325 aa4.91□□□□□ -1.62
RC3H1-201ENST00000258349 PSMB9P28065 219 aa4.91□□□□□ -1.62
RC3H1-201ENST00000258349 LRPAP1P30533 357 aa4.91□□□□□ -1.62
RC3H1-201ENST00000258349 GSTT1P30711 240 aa4.91□□□□□ -1.62
RC3H1-201ENST00000258349 FLT3P36888 993 aa4.91□□□□□ -1.62
RC3H1-201ENST00000258349 NME5P56597 212 aa4.91□□□□□ -1.62
RC3H1-201ENST00000258349 SLC20A2Q08357 652 aa4.91□□□□□ -1.62
RC3H1-201ENST00000258349 PPIDQ08752 370 aaKnown RBP4.91□□□□□ -1.62
RC3H1-201ENST00000258349 SPP2Q13103 211 aa4.91□□□□□ -1.62
RC3H1-201ENST00000258349 GLB1LQ6UWU2 654 aa4.91□□□□□ -1.62
RC3H1-201ENST00000258349 TMEM121Q9BTD3 319 aa4.91□□□□□ -1.62
RC3H1-201ENST00000258349 DDIT4Q9NX09 232 aa4.91□□□□□ -1.62
RC3H1-201ENST00000258349 PRR12Q9ULL5 1215 aa4.91□□□□□ -1.62
RC3H1-201ENST00000258349 MYO16Q9Y6X6 1858 aa4.91□□□□□ -1.62
RC3H1-201ENST00000258349 CBFA2T3O75081 653 aa4.91□□□□□ -1.62
RC3H1-201ENST00000258349 AP1G2O75843 785 aa4.91□□□□□ -1.62
RC3H1-201ENST00000258349 SUPT7LO94864 414 aa4.91□□□□□ -1.62
RC3H1-201ENST00000258349 KCNH1O95259 989 aa4.91□□□□□ -1.62
RC3H1-201ENST00000258349 VDRP11473 427 aa4.91□□□□□ -1.62
RC3H1-201ENST00000258349 CCDC130P13994 396 aa4.91□□□□□ -1.62
RC3H1-201ENST00000258349 SKIV2L2P42285 1042 aaKnown RBP4.91□□□□□ -1.62
RC3H1-201ENST00000258349 ZNF135P52742 658 aaPredicted RBP4.91□□□□□ -1.62
RC3H1-201ENST00000258349 CDK16Q00536 496 aa4.91□□□□□ -1.62
RC3H1-201ENST00000258349 MPP3Q13368 585 aa4.91□□□□□ -1.62
RC3H1-201ENST00000258349 ATAD3BQ5T9A4 648 aa4.91□□□□□ -1.62
RC3H1-201ENST00000258349 TBL1YQ9BQ87 522 aa4.91□□□□□ -1.62
RC3H1-201ENST00000258349 NLNQ9BYT8 704 aa4.91□□□□□ -1.62
RC3H1-201ENST00000258349 CYLDQ9NQC7 956 aa4.91□□□□□ -1.62
RC3H1-201ENST00000258349 ADPRHL2Q9NX46 363 aa4.91□□□□□ -1.62
RC3H1-201ENST00000258349 STX11O75558 287 aa4.91□□□□□ -1.62
RC3H1-201ENST00000258349 SGPL1O95470 568 aa4.91□□□□□ -1.62
RC3H1-201ENST00000258349 FYNP06241 537 aa4.91□□□□□ -1.62
RC3H1-201ENST00000258349 ITGALP20701 1170 aa4.91□□□□□ -1.62
RC3H1-201ENST00000258349 LHX1P48742 406 aa4.91□□□□□ -1.62
RC3H1-201ENST00000258349 MAPKAPK2P49137 400 aa4.91□□□□□ -1.62
RC3H1-201ENST00000258349 PWP1Q13610 501 aa4.91□□□□□ -1.62
RC3H1-201ENST00000258349 PKN1Q16512 942 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms