RNA–Protein interactions for RNA: ENST00000257548.9

USP30-201, Transcript of ubiquitin specific peptidase 30, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP30, Length 3,742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-201ENST00000257548 OCA2Q04671 838 aa12.66□□□□□ -0.38
USP30-201ENST00000257548 BFSP2Q13515 415 aa12.66□□□□□ -0.38
USP30-201ENST00000257548 MYBPC2Q14324 1141 aa12.66□□□□□ -0.38
USP30-201ENST00000257548 AGKQ53H12 422 aa12.66□□□□□ -0.38
USP30-201ENST00000257548 SLFN12LQ6IEE8 588 aa12.66□□□□□ -0.38
USP30-201ENST00000257548 KLHL35Q6PF15 583 aa12.66□□□□□ -0.38
USP30-201ENST00000257548 STRA8Q7Z7C7 330 aa12.66□□□□□ -0.38
USP30-201ENST00000257548 OMDQ99983 421 aa12.66□□□□□ -0.38
USP30-201ENST00000257548 GPAMQ9HCL2 828 aa12.66□□□□□ -0.38
USP30-201ENST00000257548 RNF19AQ9NV58 838 aa12.66□□□□□ -0.38
USP30-201ENST00000257548 ZNF839A8K0R7 811 aa12.65□□□□□ -0.38
USP30-201ENST00000257548 APOC4-APOC2K7ER74 178 aa12.65□□□□□ -0.38
USP30-201ENST00000257548 APOC2P02655 101 aa12.65□□□□□ -0.38
USP30-201ENST00000257548 MMP8P22894 467 aa12.65□□□□□ -0.38
USP30-201ENST00000257548 IL1R2P27930 398 aa12.65□□□□□ -0.38
USP30-201ENST00000257548 GRIA2P42262 883 aa12.65□□□□□ -0.38
USP30-201ENST00000257548 JAK3P52333 1124 aa12.65□□□□□ -0.38
USP30-201ENST00000257548 NUP107P57740 925 aa12.65□□□□□ -0.38
USP30-201ENST00000257548 MAP3K10Q02779 954 aa12.65□□□□□ -0.38
USP30-201ENST00000257548 SFSWAPQ12872 951 aaKnown RBP12.65□□□□□ -0.38
USP30-201ENST00000257548 PITRM1Q5JRX3 1037 aa12.65□□□□□ -0.38
USP30-201ENST00000257548 APOBEC3HQ6NTF7 200 aaKnown RBP12.65□□□□□ -0.38
USP30-201ENST00000257548 DDX1Q92499 740 aaKnown RBP12.65□□□□□ -0.38
USP30-201ENST00000257548 NIF3L1Q9GZT8 377 aa12.65□□□□□ -0.38
USP30-201ENST00000257548 FAM96AQ9H5X1 160 aa12.65□□□□□ -0.38
USP30-201ENST00000257548 POLR1BQ9H9Y6 1135 aa12.65□□□□□ -0.38
USP30-201ENST00000257548 CDYLQ9Y232 598 aa12.65□□□□□ -0.38
USP30-201ENST00000257548 CHD4Q14839 1912 aa12.65□□□□□ -0.38
USP30-201ENST00000257548 CNTNAP4Q9C0A0 1308 aa12.65□□□□□ -0.38
USP30-201ENST00000257548 TIPRLO75663 272 aa12.65□□□□□ -0.38
USP30-201ENST00000257548 PIGNO95427 931 aa12.65□□□□□ -0.38
USP30-201ENST00000257548 WASHC5Q12768 1159 aa12.65□□□□□ -0.38
USP30-201ENST00000257548 NME3Q13232 169 aa12.65□□□□□ -0.38
USP30-201ENST00000257548 SLC9A4Q6AI14 798 aa12.65□□□□□ -0.38
USP30-201ENST00000257548 ZBTB8OSQ8IWT0 167 aa12.65□□□□□ -0.38
USP30-201ENST00000257548 MPP5Q8N3R9 675 aa12.65□□□□□ -0.38
USP30-201ENST00000257548 ZNF781Q8N8C0 355 aa12.65□□□□□ -0.38
USP30-201ENST00000257548 AZIN2Q96A70 460 aa12.65□□□□□ -0.38
USP30-201ENST00000257548 C7orf26Q96N11 449 aa12.65□□□□□ -0.38
USP30-201ENST00000257548 PGLYRP2Q96PD5 576 aa12.65□□□□□ -0.38
USP30-201ENST00000257548 MRPS26Q9BYN8 205 aaKnown RBP12.65□□□□□ -0.38
USP30-201ENST00000257548 GCOM2Q9BZD3 368 aaPredicted RBP12.65□□□□□ -0.38
USP30-201ENST00000257548 APOBEC3GQ9HC16 384 aaKnown RBP12.65□□□□□ -0.38
USP30-201ENST00000257548 GID8Q9NWU2 228 aa12.65□□□□□ -0.38
USP30-201ENST00000257548 TRIM17Q9Y577 477 aa12.65□□□□□ -0.38
USP30-201ENST00000257548 CEP350Q5VT06 3117 aa12.65□□□□□ -0.38
USP30-201ENST00000257548 MYH11P35749 1972 aa12.65□□□□□ -0.38
USP30-201ENST00000257548 BHMG1C9JSJ3 638 aaPredicted RBP12.65□□□□□ -0.38
USP30-201ENST00000257548 C9JVG2 144 aa12.65□□□□□ -0.38
USP30-201ENST00000257548 GNGT2O14610 69 aa12.65□□□□□ -0.38
USP30-201ENST00000257548 DGAT1O75907 488 aa12.65□□□□□ -0.38
USP30-201ENST00000257548 PARNO95453 639 aaKnown RBP12.65□□□□□ -0.38
USP30-201ENST00000257548 CLIC3O95833 236 aa12.65□□□□□ -0.38
USP30-201ENST00000257548 LDHAP00338 332 aaKnown RBP12.65□□□□□ -0.38
USP30-201ENST00000257548 CCDC166P0CW27 439 aa12.65□□□□□ -0.38
USP30-201ENST00000257548 LCP1P13796 627 aa12.65□□□□□ -0.38
USP30-201ENST00000257548 TSPAN8P19075 237 aa12.65□□□□□ -0.38
USP30-201ENST00000257548 PCSK6P29122 969 aa12.65□□□□□ -0.38
USP30-201ENST00000257548 ABCE1P61221 599 aaKnown RBP12.65□□□□□ -0.38
USP30-201ENST00000257548 DGKZQ13574 1117 aa12.65□□□□□ -0.38
USP30-201ENST00000257548 DLG2Q15700 870 aa12.65□□□□□ -0.38
USP30-201ENST00000257548 AMHR2Q16671 573 aa12.65□□□□□ -0.38
USP30-201ENST00000257548 FUT11Q495W5 492 aa12.65□□□□□ -0.38
USP30-201ENST00000257548 TATDN1Q6P1N9 297 aa12.65□□□□□ -0.38
USP30-201ENST00000257548 BBS12Q6ZW61 710 aa12.65□□□□□ -0.38
USP30-201ENST00000257548 CHST15Q7LFX5 561 aaPredicted RBP12.65□□□□□ -0.38
USP30-201ENST00000257548 MAP4K3Q8IVH8 894 aa12.65□□□□□ -0.38
USP30-201ENST00000257548 DSELQ8IZU8 1212 aa12.65□□□□□ -0.38
USP30-201ENST00000257548 SIX6OS1Q8N1H7 587 aa12.65□□□□□ -0.38
USP30-201ENST00000257548 NAT8LQ8N9F0 302 aa12.65□□□□□ -0.38
USP30-201ENST00000257548 NKD2Q969F2 451 aaPredicted RBP12.65□□□□□ -0.38
USP30-201ENST00000257548 GLIS2Q9BZE0 524 aaPredicted RBP12.65□□□□□ -0.38
USP30-201ENST00000257548 TLE6Q9H808 572 aa12.65□□□□□ -0.38
USP30-201ENST00000257548 BFARQ9NZS9 450 aa12.65□□□□□ -0.38
USP30-201ENST00000257548 DAPK2Q9UIK4 370 aa12.65□□□□□ -0.38
USP30-201ENST00000257548 AP4S1Q9Y587 144 aa12.65□□□□□ -0.38
USP30-201ENST00000257548 CACNA1SQ13698 1873 aa12.65□□□□□ -0.39
USP30-201ENST00000257548 H0YCG3 227 aa12.64□□□□□ -0.39
USP30-201ENST00000257548 CCDC130P13994 396 aa12.64□□□□□ -0.39
USP30-201ENST00000257548 CCNIQ14094 377 aa12.64□□□□□ -0.39
USP30-201ENST00000257548 PLCL1Q15111 1095 aa12.64□□□□□ -0.39
USP30-201ENST00000257548 CHSY1Q86X52 802 aa12.64□□□□□ -0.39
USP30-201ENST00000257548 OFCC1Q8IZS5 231 aa12.64□□□□□ -0.39
USP30-201ENST00000257548 AFAP1L2Q8N4X5 818 aa12.64□□□□□ -0.39
USP30-201ENST00000257548 USP33Q8TEY7 942 aa12.64□□□□□ -0.39
USP30-201ENST00000257548 ZNF516Q92618 1163 aa12.64□□□□□ -0.39
USP30-201ENST00000257548 FIZ1Q96SL8 496 aa12.64□□□□□ -0.39
USP30-201ENST00000257548 C20orf27Q9GZN8 174 aa12.64□□□□□ -0.39
USP30-201ENST00000257548 TMEM216Q9P0N5 145 aa12.64□□□□□ -0.39
USP30-201ENST00000257548 COL16A1Q07092 1604 aaPredicted RBP12.64□□□□□ -0.39
USP30-201ENST00000257548 MYO18AQ92614 2054 aaKnown RBP12.64□□□□□ -0.39
USP30-201ENST00000257548 A0A096LPK6 155 aa12.64□□□□□ -0.39
USP30-201ENST00000257548 SIGLEC16A6NMB1 481 aa12.64□□□□□ -0.39
USP30-201ENST00000257548 ZBTB11O95625 1053 aaPredicted RBP12.64□□□□□ -0.39
USP30-201ENST00000257548 MAGP20916 626 aa12.64□□□□□ -0.39
USP30-201ENST00000257548 TNFSF9P41273 254 aa12.64□□□□□ -0.39
USP30-201ENST00000257548 IDH3AP50213 366 aa12.64□□□□□ -0.39
USP30-201ENST00000257548 LSM3P62310 102 aaKnown RBP12.64□□□□□ -0.39
USP30-201ENST00000257548 YWHAZP63104 245 aaKnown RBP12.64□□□□□ -0.39
USP30-201ENST00000257548 ZBTB17Q13105 803 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms