RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 ALDH1A3P47895 512 aa6.91□□□□□ -1.3
PDGFRA-201ENST00000257290 CPA2P48052 419 aa6.91□□□□□ -1.3
PDGFRA-201ENST00000257290 TKTL1P51854 596 aa6.91□□□□□ -1.3
PDGFRA-201ENST00000257290 CAMK2BQ13554 666 aa6.91□□□□□ -1.3
PDGFRA-201ENST00000257290 QPCTQ16769 361 aa6.91□□□□□ -1.3
PDGFRA-201ENST00000257290 PGS1Q32NB8 556 aa6.91□□□□□ -1.3
PDGFRA-201ENST00000257290 RNASEH2BQ5TBB1 312 aaKnown RBP6.91□□□□□ -1.3
PDGFRA-201ENST00000257290 PAPD7Q5XG87 772 aaKnown RBP6.91□□□□□ -1.3
PDGFRA-201ENST00000257290 PDZD4Q76G19 769 aaPredicted RBP6.91□□□□□ -1.3
PDGFRA-201ENST00000257290 C3orf58Q8NDZ4 430 aa6.91□□□□□ -1.3
PDGFRA-201ENST00000257290 C19orf18Q8NEA5 215 aa6.91□□□□□ -1.3
PDGFRA-201ENST00000257290 OR7A2PQ8NGA2 310 aa6.91□□□□□ -1.3
PDGFRA-201ENST00000257290 OR5J2Q8NH18 312 aa6.91□□□□□ -1.3
PDGFRA-201ENST00000257290 THRSPQ92748 146 aa6.91□□□□□ -1.3
PDGFRA-201ENST00000257290 UPF1Q92900 1129 aaKnown RBP eCLIP6.91□□□□□ -1.3
PDGFRA-201ENST00000257290 ZYG11BQ9C0D3 744 aa6.91□□□□□ -1.3
PDGFRA-201ENST00000257290 SENP6Q9GZR1 1112 aaPredicted RBP6.91□□□□□ -1.3
PDGFRA-201ENST00000257290 CAPN10Q9HC96 672 aa6.91□□□□□ -1.3
PDGFRA-201ENST00000257290 IGSF9Q9P2J2 1179 aa6.91□□□□□ -1.3
PDGFRA-201ENST00000257290 MTRRQ9UBK8 725 aa6.91□□□□□ -1.3
PDGFRA-201ENST00000257290 CA5BQ9Y2D0 317 aa6.91□□□□□ -1.3
PDGFRA-201ENST00000257290 CDY2AQ9Y6F7 541 aa6.91□□□□□ -1.3
PDGFRA-201ENST00000257290 PRPF3O43395 683 aaKnown RBP6.91□□□□□ -1.3
PDGFRA-201ENST00000257290 DYRK3O43781 588 aa6.91□□□□□ -1.3
PDGFRA-201ENST00000257290 PPM1BO75688 479 aa6.91□□□□□ -1.3
PDGFRA-201ENST00000257290 RPS17P08708 135 aaKnown RBP6.91□□□□□ -1.3
PDGFRA-201ENST00000257290 LCP1P13796 627 aa6.91□□□□□ -1.3
PDGFRA-201ENST00000257290 OGNP20774 298 aaKnown RBP6.91□□□□□ -1.3
PDGFRA-201ENST00000257290 DNAJB1P25685 340 aa6.91□□□□□ -1.3
PDGFRA-201ENST00000257290 NT5C2P49902 561 aa6.91□□□□□ -1.3
PDGFRA-201ENST00000257290 STX4Q12846 297 aa6.91□□□□□ -1.3
PDGFRA-201ENST00000257290 HERC4Q5GLZ8 1057 aaPredicted RBP6.91□□□□□ -1.3
PDGFRA-201ENST00000257290 ANKRD26P1Q6NSI1 321 aa6.91□□□□□ -1.3
PDGFRA-201ENST00000257290 CYP4F22Q6NT55 531 aa6.91□□□□□ -1.3
PDGFRA-201ENST00000257290 SMIM15Q7Z3B0 74 aa6.91□□□□□ -1.3
PDGFRA-201ENST00000257290 LRRC17Q8N6Y2 441 aa6.91□□□□□ -1.3
PDGFRA-201ENST00000257290 ANKFN1Q8N957 763 aa6.91□□□□□ -1.3
PDGFRA-201ENST00000257290 URGCPQ8TCY9 931 aa6.91□□□□□ -1.3
PDGFRA-201ENST00000257290 STAMQ92783 540 aa6.91□□□□□ -1.3
PDGFRA-201ENST00000257290 TP53INP1Q96A56 240 aa6.91□□□□□ -1.3
PDGFRA-201ENST00000257290 BTBD6Q96KE9 485 aa6.91□□□□□ -1.3
PDGFRA-201ENST00000257290 DMRTB1Q96MA1 342 aa6.91□□□□□ -1.3
PDGFRA-201ENST00000257290 CDK5RAP1Q96SZ6 601 aaKnown RBP6.91□□□□□ -1.3
PDGFRA-201ENST00000257290 GPAMQ9HCL2 828 aa6.91□□□□□ -1.3
PDGFRA-201ENST00000257290 SCN3BQ9NY72 215 aa6.91□□□□□ -1.3
PDGFRA-201ENST00000257290 PRKAG3Q9UGI9 489 aa6.91□□□□□ -1.3
PDGFRA-201ENST00000257290 RAB26Q9ULW5 256 aa6.91□□□□□ -1.3
PDGFRA-201ENST00000257290 GTF2A1LQ9UNN4 478 aa6.91□□□□□ -1.3
PDGFRA-201ENST00000257290 ADCY9O60503 1353 aa6.91□□□□□ -1.3
PDGFRA-201ENST00000257290 ASTN2O75129 1339 aaPredicted RBP6.91□□□□□ -1.3
PDGFRA-201ENST00000257290 C5orf60A6NFR6 353 aa6.91□□□□□ -1.3
PDGFRA-201ENST00000257290 F8W8V4 182 aa6.91□□□□□ -1.3
PDGFRA-201ENST00000257290 LRRN2O75325 713 aa6.91□□□□□ -1.3
PDGFRA-201ENST00000257290 RAB3DO95716 219 aa6.91□□□□□ -1.3
PDGFRA-201ENST00000257290 CASP4P49662 377 aa6.91□□□□□ -1.3
PDGFRA-201ENST00000257290 GMFBP60983 142 aa6.91□□□□□ -1.3
PDGFRA-201ENST00000257290 RAB5BP61020 215 aa6.91□□□□□ -1.3
PDGFRA-201ENST00000257290 IFRD2Q12894 506 aaPredicted RBP6.91□□□□□ -1.3
PDGFRA-201ENST00000257290 ILF2Q12905 390 aaKnown RBP6.91□□□□□ -1.3
PDGFRA-201ENST00000257290 ELOAQ14241 798 aaKnown RBP6.91□□□□□ -1.3
PDGFRA-201ENST00000257290 STAT4Q14765 748 aa6.91□□□□□ -1.3
PDGFRA-201ENST00000257290 MAJINQ3KP22 176 aa6.91□□□□□ -1.3
PDGFRA-201ENST00000257290 CYP20A1Q6UW02 462 aa6.91□□□□□ -1.3
PDGFRA-201ENST00000257290 CHST3Q7LGC8 479 aa6.91□□□□□ -1.3
PDGFRA-201ENST00000257290 TAF8Q7Z7C8 310 aa6.91□□□□□ -1.3
PDGFRA-201ENST00000257290 MTDHQ86UE4 582 aaKnown RBP6.91□□□□□ -1.3
PDGFRA-201ENST00000257290 RASAL3Q86YV0 1011 aa6.91□□□□□ -1.3
PDGFRA-201ENST00000257290 C12orf56Q8IXR9 622 aa6.91□□□□□ -1.3
PDGFRA-201ENST00000257290 VAT1LQ9HCJ6 419 aa6.91□□□□□ -1.3
PDGFRA-201ENST00000257290 RBM12Q9NTZ6 932 aaKnown RBP6.91□□□□□ -1.3
PDGFRA-201ENST00000257290 RDH8Q9NYR8 311 aa6.91□□□□□ -1.3
PDGFRA-201ENST00000257290 AP4B1Q9Y6B7 739 aa6.91□□□□□ -1.3
PDGFRA-201ENST00000257290 XDHP47989 1333 aa6.9□□□□□ -1.3
PDGFRA-201ENST00000257290 TTLL8A6PVC2 850 aa6.9□□□□□ -1.3
PDGFRA-201ENST00000257290 ZNF862O60290 1169 aa6.9□□□□□ -1.3
PDGFRA-201ENST00000257290 PNPP00491 289 aa6.9□□□□□ -1.3
PDGFRA-201ENST00000257290 DGKQP52824 942 aa6.9□□□□□ -1.3
PDGFRA-201ENST00000257290 NAPAP54920 295 aa6.9□□□□□ -1.3
PDGFRA-201ENST00000257290 EEF1A1P68104 462 aaKnown RBP6.9□□□□□ -1.3
PDGFRA-201ENST00000257290 EEF1A2Q05639 463 aaKnown RBP6.9□□□□□ -1.3
PDGFRA-201ENST00000257290 GALEQ14376 348 aa6.9□□□□□ -1.3
PDGFRA-201ENST00000257290 EEF1A1P5Q5VTE0 462 aa6.9□□□□□ -1.3
PDGFRA-201ENST00000257290 PDPK2PQ6A1A2 396 aa6.9□□□□□ -1.3
PDGFRA-201ENST00000257290 C6orf89Q6UWU4 347 aa6.9□□□□□ -1.3
PDGFRA-201ENST00000257290 P3H2Q8IVL5 708 aa6.9□□□□□ -1.3
PDGFRA-201ENST00000257290 MAPKAPK5Q8IW41 473 aa6.9□□□□□ -1.3
PDGFRA-201ENST00000257290 LZTR1Q8N653 840 aa6.9□□□□□ -1.3
PDGFRA-201ENST00000257290 TBCDQ9BTW9 1192 aa6.9□□□□□ -1.3
PDGFRA-201ENST00000257290 STN1Q9H668 368 aaKnown RBP6.9□□□□□ -1.3
PDGFRA-201ENST00000257290 ACAD9Q9H845 621 aa6.9□□□□□ -1.3
PDGFRA-201ENST00000257290 ZFYVE1Q9HBF4 777 aa6.9□□□□□ -1.3
PDGFRA-201ENST00000257290 ADA2Q9NZK5 511 aa6.9□□□□□ -1.3
PDGFRA-201ENST00000257290 CNOT11Q9UKZ1 510 aaKnown RBP6.9□□□□□ -1.3
PDGFRA-201ENST00000257290 PNMA3Q9UL41 463 aa6.9□□□□□ -1.3
PDGFRA-201ENST00000257290 RAB23Q9ULC3 237 aa6.9□□□□□ -1.3
PDGFRA-201ENST00000257290 UBXN8O00124 270 aa6.9□□□□□ -1.3
PDGFRA-201ENST00000257290 CCNE2O96020 404 aa6.9□□□□□ -1.3
PDGFRA-201ENST00000257290 ALBP02768 609 aa6.9□□□□□ -1.3
PDGFRA-201ENST00000257290 H2AFZP0C0S5 128 aa6.9□□□□□ -1.3
PDGFRA-201ENST00000257290 PAMP19021 973 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms