RNA–Protein interactions for RNA: ENST00000254231.4

LIN28A-201, Transcript of lin-28 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28A, Length 3,458 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28A-201ENST00000254231 HSD17B3P37058 310 aa12.03□□□□□ -0.48
LIN28A-201ENST00000254231 TMED2Q15363 201 aa12.03□□□□□ -0.48
LIN28A-201ENST00000254231 MRPL10Q7Z7H8 261 aaKnown RBP12.03□□□□□ -0.48
LIN28A-201ENST00000254231 HS6ST3Q8IZP7 471 aa12.03□□□□□ -0.48
LIN28A-201ENST00000254231 TTC39CQ8N584 583 aa12.03□□□□□ -0.48
LIN28A-201ENST00000254231 IPMKQ8NFU5 416 aa12.03□□□□□ -0.48
LIN28A-201ENST00000254231 CSPG4P5Q96PW8 444 aa12.03□□□□□ -0.48
LIN28A-201ENST00000254231 SLC22A12Q96S37 553 aa12.03□□□□□ -0.48
LIN28A-201ENST00000254231 RNF14Q9UBS8 474 aa12.03□□□□□ -0.48
LIN28A-201ENST00000254231 LCMT1Q9UIC8 334 aa12.03□□□□□ -0.48
LIN28A-201ENST00000254231 ASCC3Q8N3C0 2202 aaKnown RBP12.03□□□□□ -0.48
LIN28A-201ENST00000254231 SPAG7O75391 227 aa12.03□□□□□ -0.48
LIN28A-201ENST00000254231 ADRA1BP35368 520 aa12.03□□□□□ -0.48
LIN28A-201ENST00000254231 TBX4P57082 545 aa12.03□□□□□ -0.48
LIN28A-201ENST00000254231 FPGSQ05932 587 aa12.03□□□□□ -0.48
LIN28A-201ENST00000254231 SLC10A2Q12908 348 aaPredicted RBP12.03□□□□□ -0.48
LIN28A-201ENST00000254231 CD300LGQ6UXG3 332 aa12.03□□□□□ -0.48
LIN28A-201ENST00000254231 PLD5Q8N7P1 536 aa12.03□□□□□ -0.48
LIN28A-201ENST00000254231 HSFY1Q96LI6 401 aa12.03□□□□□ -0.48
LIN28A-201ENST00000254231 RNF157Q96PX1 679 aa12.03□□□□□ -0.48
LIN28A-201ENST00000254231 C12orf65Q9H3J6 166 aaKnown RBP12.03□□□□□ -0.48
LIN28A-201ENST00000254231 CBX4O00257 560 aa12.02□□□□□ -0.48
LIN28A-201ENST00000254231 PITPNM1O00562 1244 aa12.02□□□□□ -0.48
LIN28A-201ENST00000254231 GABRDO14764 452 aa12.02□□□□□ -0.48
LIN28A-201ENST00000254231 TIMP1P01033 207 aa12.02□□□□□ -0.48
LIN28A-201ENST00000254231 FYNP06241 537 aa12.02□□□□□ -0.48
LIN28A-201ENST00000254231 MCM3P25205 808 aa12.02□□□□□ -0.48
LIN28A-201ENST00000254231 RDXP35241 583 aaKnown RBP12.02□□□□□ -0.48
LIN28A-201ENST00000254231 TFDP2Q14188 446 aa12.02□□□□□ -0.48
LIN28A-201ENST00000254231 SLC25A52Q3SY17 297 aa12.02□□□□□ -0.48
LIN28A-201ENST00000254231 KATNAL2Q8IYT4 538 aa12.02□□□□□ -0.48
LIN28A-201ENST00000254231 SPATA22Q8NHS9 363 aa12.02□□□□□ -0.48
LIN28A-201ENST00000254231 GDAP1Q8TB36 358 aa12.02□□□□□ -0.48
LIN28A-201ENST00000254231 RPL10LQ96L21 214 aaKnown RBP12.02□□□□□ -0.48
LIN28A-201ENST00000254231 ABCF3Q9NUQ8 709 aa12.02□□□□□ -0.48
LIN28A-201ENST00000254231 SAGE1Q9NXZ1 904 aa12.02□□□□□ -0.48
LIN28A-201ENST00000254231 SPG21Q9NZD8 308 aa12.02□□□□□ -0.48
LIN28A-201ENST00000254231 SLC17A6Q9P2U8 582 aa12.02□□□□□ -0.48
LIN28A-201ENST00000254231 I6L893 689 aaPredicted RBP12.02□□□□□ -0.49
LIN28A-201ENST00000254231 LRG1P02750 347 aa12.02□□□□□ -0.49
LIN28A-201ENST00000254231 HDCP19113 662 aa12.02□□□□□ -0.49
LIN28A-201ENST00000254231 MNX1P50219 401 aaPredicted RBP12.02□□□□□ -0.49
LIN28A-201ENST00000254231 PMS2P54278 862 aa12.02□□□□□ -0.49
LIN28A-201ENST00000254231 ERVFC1P60507 584 aa12.02□□□□□ -0.49
LIN28A-201ENST00000254231 NNTQ13423 1086 aa12.02□□□□□ -0.49
LIN28A-201ENST00000254231 VEPH1Q14D04 833 aa12.02□□□□□ -0.49
LIN28A-201ENST00000254231 SLC26A9Q7LBE3 791 aa12.02□□□□□ -0.49
LIN28A-201ENST00000254231 OTOP3Q7RTS5 596 aa12.02□□□□□ -0.49
LIN28A-201ENST00000254231 UNC5BQ8IZJ1 945 aa12.02□□□□□ -0.49
LIN28A-201ENST00000254231 LGI2Q8N0V4 545 aa12.02□□□□□ -0.49
LIN28A-201ENST00000254231 PYROXD1Q8WU10 500 aa12.02□□□□□ -0.49
LIN28A-201ENST00000254231 TM6SF2Q9BZW4 377 aa12.02□□□□□ -0.49
LIN28A-201ENST00000254231 VRTNQ9H8Y1 702 aa12.02□□□□□ -0.49
LIN28A-201ENST00000254231 TPRP12270 2363 aaKnown RBP12.02□□□□□ -0.49
LIN28A-201ENST00000254231 ANKRD12Q6UB98 2062 aa12.02□□□□□ -0.49
LIN28A-201ENST00000254231 LIASO43766 372 aa12.02□□□□□ -0.49
LIN28A-201ENST00000254231 APOEP02649 317 aa12.02□□□□□ -0.49
LIN28A-201ENST00000254231 CNPP09543 421 aaKnown RBP12.02□□□□□ -0.49
LIN28A-201ENST00000254231 RPL22P35268 128 aaKnown RBP12.02□□□□□ -0.49
LIN28A-201ENST00000254231 GLUD2P49448 558 aa12.02□□□□□ -0.49
LIN28A-201ENST00000254231 TAP1Q03518 808 aa12.02□□□□□ -0.49
LIN28A-201ENST00000254231 NOMO1Q15155 1222 aa12.02□□□□□ -0.49
LIN28A-201ENST00000254231 ANO4Q32M45 955 aa12.02□□□□□ -0.49
LIN28A-201ENST00000254231 ZNF662Q6ZS27 426 aa12.02□□□□□ -0.49
LIN28A-201ENST00000254231 SRRM1Q8IYB3 904 aaKnown RBP12.02□□□□□ -0.49
LIN28A-201ENST00000254231 CARNMT1Q8N4J0 409 aa12.02□□□□□ -0.49
LIN28A-201ENST00000254231 TOP1MTQ969P6 601 aa12.02□□□□□ -0.49
LIN28A-201ENST00000254231 DDX56Q9NY93 547 aaKnown RBP12.02□□□□□ -0.49
LIN28A-201ENST00000254231 DSEQ9UL01 958 aa12.02□□□□□ -0.49
LIN28A-201ENST00000254231 TBX21Q9UL17 535 aa12.02□□□□□ -0.49
LIN28A-201ENST00000254231 ATP8B3O60423 1300 aa12.01□□□□□ -0.49
LIN28A-201ENST00000254231 CACNA1EQ15878 2313 aa12.01□□□□□ -0.49
LIN28A-201ENST00000254231 ANK1P16157 1881 aa12.01□□□□□ -0.49
LIN28A-201ENST00000254231 MT-CYBP00156 380 aaPredicted RBP12.01□□□□□ -0.49
LIN28A-201ENST00000254231 CNKSR3Q6P9H4 555 aa12.01□□□□□ -0.49
LIN28A-201ENST00000254231 C4orf33Q8N1A6 199 aa12.01□□□□□ -0.49
LIN28A-201ENST00000254231 DCLK2Q8N568 766 aa12.01□□□□□ -0.49
LIN28A-201ENST00000254231 POF1BQ8WVV4 589 aa12.01□□□□□ -0.49
LIN28A-201ENST00000254231 SMYD2Q9NRG4 433 aa12.01□□□□□ -0.49
LIN28A-201ENST00000254231 HPCAL4Q9UM19 191 aa12.01□□□□□ -0.49
LIN28A-201ENST00000254231 PCDHB8Q9UN66 801 aa12.01□□□□□ -0.49
LIN28A-201ENST00000254231 FSCN2O14926 492 aa12.01□□□□□ -0.49
LIN28A-201ENST00000254231 GJB3O75712 270 aa12.01□□□□□ -0.49
LIN28A-201ENST00000254231 CAPN2P17655 700 aa12.01□□□□□ -0.49
LIN28A-201ENST00000254231 OR1E1P30953 314 aa12.01□□□□□ -0.49
LIN28A-201ENST00000254231 SMAD3P84022 425 aaKnown RBP12.01□□□□□ -0.49
LIN28A-201ENST00000254231 MAPRE1Q15691 268 aaKnown RBP12.01□□□□□ -0.49
LIN28A-201ENST00000254231 ZKSCAN8Q15776 578 aaPredicted RBP12.01□□□□□ -0.49
LIN28A-201ENST00000254231 ARHGAP17Q68EM7 881 aa12.01□□□□□ -0.49
LIN28A-201ENST00000254231 ANKS3Q6ZW76 656 aa12.01□□□□□ -0.49
LIN28A-201ENST00000254231 PPM1NQ8N819 430 aa12.01□□□□□ -0.49
LIN28A-201ENST00000254231 EPAS1Q99814 870 aa12.01□□□□□ -0.49
LIN28A-201ENST00000254231 MRPL9Q9BYD2 267 aaKnown RBP12.01□□□□□ -0.49
LIN28A-201ENST00000254231 IKBKGQ9Y6K9 419 aa12.01□□□□□ -0.49
LIN28A-201ENST00000254231 MYOFQ9NZM1 2061 aa12.01□□□□□ -0.49
LIN28A-201ENST00000254231 KNTC1P50748 2209 aa12.01□□□□□ -0.49
LIN28A-201ENST00000254231 BTNL10A8MVZ5 291 aa12.01□□□□□ -0.49
LIN28A-201ENST00000254231 DGKIO75912 1065 aa12.01□□□□□ -0.49
LIN28A-201ENST00000254231 MYZAPP0CAP1 466 aa12.01□□□□□ -0.49
LIN28A-201ENST00000254231 L1CAMP32004 1257 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms