RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 C20orf96Q9NUD7 363 aaPredicted RBP12.31□□□□□ -0.44
USHBP1-201ENST00000252597 POMPQ9Y244 141 aa12.31□□□□□ -0.44
USHBP1-201ENST00000252597 A0A087WZ62 844 aa12.31□□□□□ -0.44
USHBP1-201ENST00000252597 STBD1O95210 358 aa12.31□□□□□ -0.44
USHBP1-201ENST00000252597 BACE1P56817 501 aa12.31□□□□□ -0.44
USHBP1-201ENST00000252597 ANGEL2Q5VTE6 544 aaKnown RBP12.31□□□□□ -0.44
USHBP1-201ENST00000252597 FAM160B1Q5W0V3 765 aa12.31□□□□□ -0.44
USHBP1-201ENST00000252597 TRNP1Q6NT89 227 aa12.31□□□□□ -0.44
USHBP1-201ENST00000252597 CYP2R1Q6VVX0 501 aa12.31□□□□□ -0.44
USHBP1-201ENST00000252597 CHSY1Q86X52 802 aa12.31□□□□□ -0.44
USHBP1-201ENST00000252597 PCDH20Q8N6Y1 951 aaKnown RBP12.31□□□□□ -0.44
USHBP1-201ENST00000252597 EXT2Q93063 718 aa12.31□□□□□ -0.44
USHBP1-201ENST00000252597 SPATA33Q96N06 139 aa12.31□□□□□ -0.44
USHBP1-201ENST00000252597 TSNARE1Q96NA8 513 aa12.31□□□□□ -0.44
USHBP1-201ENST00000252597 LENG8Q96PV6 779 aaPredicted RBP12.31□□□□□ -0.44
USHBP1-201ENST00000252597 ACO2Q99798 780 aaKnown RBP12.31□□□□□ -0.44
USHBP1-201ENST00000252597 OMDQ99983 421 aa12.31□□□□□ -0.44
USHBP1-201ENST00000252597 FDXACB1Q9BRP7 624 aaPredicted RBP12.31□□□□□ -0.44
USHBP1-201ENST00000252597 SPATA16Q9BXB7 569 aa12.31□□□□□ -0.44
USHBP1-201ENST00000252597 DHX33Q9H6R0 707 aaKnown RBP12.31□□□□□ -0.44
USHBP1-201ENST00000252597 PCDH18Q9HCL0 1135 aa12.31□□□□□ -0.44
USHBP1-201ENST00000252597 CDH22Q9UJ99 828 aa12.31□□□□□ -0.44
USHBP1-201ENST00000252597 PCDHGB4Q9UN71 923 aa12.31□□□□□ -0.44
USHBP1-201ENST00000252597 SSX2IPQ9Y2D8 614 aa12.31□□□□□ -0.44
USHBP1-201ENST00000252597 PCDHGB5Q9Y5G0 923 aa12.31□□□□□ -0.44
USHBP1-201ENST00000252597 GPR25O00155 361 aa12.31□□□□□ -0.44
USHBP1-201ENST00000252597 CLPTM1O96005 669 aa12.31□□□□□ -0.44
USHBP1-201ENST00000252597 CHRNGP07510 517 aa12.31□□□□□ -0.44
USHBP1-201ENST00000252597 SERPINA6P08185 405 aa12.31□□□□□ -0.44
USHBP1-201ENST00000252597 CPA3P15088 417 aa12.31□□□□□ -0.44
USHBP1-201ENST00000252597 PSMB4P28070 264 aa12.31□□□□□ -0.44
USHBP1-201ENST00000252597 SLC18A2Q05940 514 aa12.31□□□□□ -0.44
USHBP1-201ENST00000252597 POU5F1BQ06416 359 aa12.31□□□□□ -0.44
USHBP1-201ENST00000252597 PDE1CQ14123 709 aaPredicted RBP12.31□□□□□ -0.44
USHBP1-201ENST00000252597 TTLL12Q14166 644 aaPredicted RBP12.31□□□□□ -0.44
USHBP1-201ENST00000252597 KCNJ11Q14654 390 aa12.31□□□□□ -0.44
USHBP1-201ENST00000252597 SLC5A9Q2M3M2 681 aa12.31□□□□□ -0.44
USHBP1-201ENST00000252597 FAM219BQ5XKK7 198 aa12.31□□□□□ -0.44
USHBP1-201ENST00000252597 STRA8Q7Z7C7 330 aa12.31□□□□□ -0.44
USHBP1-201ENST00000252597 NLGN2Q8NFZ4 835 aa12.31□□□□□ -0.44
USHBP1-201ENST00000252597 DIS3LQ8TF46 1054 aaKnown RBP12.31□□□□□ -0.44
USHBP1-201ENST00000252597 GMLQ99445 158 aa12.31□□□□□ -0.44
USHBP1-201ENST00000252597 EBNA1BP2Q99848 306 aaKnown RBP12.31□□□□□ -0.44
USHBP1-201ENST00000252597 ZNF518BQ9C0D4 1074 aa12.31□□□□□ -0.44
USHBP1-201ENST00000252597 TASP1Q9H6P5 420 aa12.31□□□□□ -0.44
USHBP1-201ENST00000252597 SPON1Q9HCB6 807 aa12.31□□□□□ -0.44
USHBP1-201ENST00000252597 CYP4F12Q9HCS2 524 aa12.31□□□□□ -0.44
USHBP1-201ENST00000252597 KLK14Q9P0G3 267 aa12.31□□□□□ -0.44
USHBP1-201ENST00000252597 HACL1Q9UJ83 578 aa12.31□□□□□ -0.44
USHBP1-201ENST00000252597 ARL4AP40617 200 aa12.3□□□□□ -0.44
USHBP1-201ENST00000252597 MAPK10P53779 464 aa12.3□□□□□ -0.44
USHBP1-201ENST00000252597 SLC18A1P54219 525 aa12.3□□□□□ -0.44
USHBP1-201ENST00000252597 CCDC142Q17RM4 750 aa12.3□□□□□ -0.44
USHBP1-201ENST00000252597 GEN1Q17RS7 908 aa12.3□□□□□ -0.44
USHBP1-201ENST00000252597 DCAF6Q58WW2 860 aa12.3□□□□□ -0.44
USHBP1-201ENST00000252597 SH2D4BQ5SQS7 431 aa12.3□□□□□ -0.44
USHBP1-201ENST00000252597 PPP1R26Q5T8A7 1209 aaPredicted RBP12.3□□□□□ -0.44
USHBP1-201ENST00000252597 TMCO4Q5TGY1 634 aa12.3□□□□□ -0.44
USHBP1-201ENST00000252597 FBXO16Q8IX29 292 aaPredicted RBP12.3□□□□□ -0.44
USHBP1-201ENST00000252597 PQLC3Q8N755 202 aa12.3□□□□□ -0.44
USHBP1-201ENST00000252597 OPTNQ96CV9 577 aa12.3□□□□□ -0.44
USHBP1-201ENST00000252597 OR52B2Q96RD2 323 aa12.3□□□□□ -0.44
USHBP1-201ENST00000252597 AGAP2Q99490 1192 aa12.3□□□□□ -0.44
USHBP1-201ENST00000252597 CAAP1Q9H8G2 361 aa12.3□□□□□ -0.44
USHBP1-201ENST00000252597 COG4Q9H9E3 785 aa12.3□□□□□ -0.44
USHBP1-201ENST00000252597 GTSE1Q9NYZ3 720 aa12.3□□□□□ -0.44
USHBP1-201ENST00000252597 ASB3Q9Y575 518 aa12.3□□□□□ -0.44
USHBP1-201ENST00000252597 C15orf38-AP3S2A0A0A6YYH1 394 aa12.3□□□□□ -0.44
USHBP1-201ENST00000252597 MAGEC1O60732 1142 aa12.3□□□□□ -0.44
USHBP1-201ENST00000252597 TGDSO95455 350 aa12.3□□□□□ -0.44
USHBP1-201ENST00000252597 HOXC6P09630 235 aa12.3□□□□□ -0.44
USHBP1-201ENST00000252597 CCDC130P13994 396 aa12.3□□□□□ -0.44
USHBP1-201ENST00000252597 IDH3AP50213 366 aa12.3□□□□□ -0.44
USHBP1-201ENST00000252597 CDK7P50613 346 aa12.3□□□□□ -0.44
USHBP1-201ENST00000252597 ZNF143P52747 638 aaPredicted RBP12.3□□□□□ -0.44
USHBP1-201ENST00000252597 IRF9Q00978 393 aa12.3□□□□□ -0.44
USHBP1-201ENST00000252597 SLC9B1Q4ZJI4 515 aa12.3□□□□□ -0.44
USHBP1-201ENST00000252597 ARPINQ7Z6K5 226 aa12.3□□□□□ -0.44
USHBP1-201ENST00000252597 MICALL2Q8IY33 904 aa12.3□□□□□ -0.44
USHBP1-201ENST00000252597 TRIML2Q8N7C3 387 aa12.3□□□□□ -0.44
USHBP1-201ENST00000252597 CMASQ8NFW8 434 aaPredicted RBP12.3□□□□□ -0.44
USHBP1-201ENST00000252597 OR52K1Q8NGK4 314 aa12.3□□□□□ -0.44
USHBP1-201ENST00000252597 TRPV6Q9H1D0 765 aa12.3□□□□□ -0.44
USHBP1-201ENST00000252597 CDT1Q9H211 546 aa12.3□□□□□ -0.44
USHBP1-201ENST00000252597 USP29Q9HBJ7 922 aa12.3□□□□□ -0.44
USHBP1-201ENST00000252597 SIPA1L1O43166 1804 aa12.3□□□□□ -0.44
USHBP1-201ENST00000252597 MSCO60682 206 aa12.29□□□□□ -0.44
USHBP1-201ENST00000252597 KLHL2O95198 593 aa12.29□□□□□ -0.44
USHBP1-201ENST00000252597 SRGAP2BP0DMP2 458 aa12.29□□□□□ -0.44
USHBP1-201ENST00000252597 TSPAN8P19075 237 aa12.29□□□□□ -0.44
USHBP1-201ENST00000252597 MPSTP25325 297 aa12.29□□□□□ -0.44
USHBP1-201ENST00000252597 ARL2P36404 184 aa12.29□□□□□ -0.44
USHBP1-201ENST00000252597 GNL1P36915 607 aaPredicted RBP12.29□□□□□ -0.44
USHBP1-201ENST00000252597 ETFBP38117 255 aa12.29□□□□□ -0.44
USHBP1-201ENST00000252597 ALDH1A3P47895 512 aa12.29□□□□□ -0.44
USHBP1-201ENST00000252597 PLK1P53350 603 aa12.29□□□□□ -0.44
USHBP1-201ENST00000252597 USP46P62068 366 aa12.29□□□□□ -0.44
USHBP1-201ENST00000252597 CCDC14Q49A88 953 aa12.29□□□□□ -0.44
USHBP1-201ENST00000252597 FAM47CQ5HY64 1035 aa12.29□□□□□ -0.44
USHBP1-201ENST00000252597 PPP1R2P3Q6NXS1 205 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms