RNA–Protein interactions for RNA: ENST00000250495.9

NEDD8-201, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD8, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-201ENST00000250495 MORC3Q14149 939 aa21.93■■□□□ 1.1
NEDD8-201ENST00000250495 MPP7Q5T2T1 576 aa21.93■■□□□ 1.1
NEDD8-201ENST00000250495 CHST9Q7L1S5 443 aa21.93■■□□□ 1.1
NEDD8-201ENST00000250495 ZNF557Q8N988 423 aaPredicted RBP21.93■■□□□ 1.1
NEDD8-201ENST00000250495 AZIN2Q96A70 460 aa21.93■■□□□ 1.1
NEDD8-201ENST00000250495 ZSWIM1Q9BR11 485 aa21.93■■□□□ 1.1
NEDD8-201ENST00000250495 DNAAF2Q9NVR5 837 aaKnown RBP21.93■■□□□ 1.1
NEDD8-201ENST00000250495 WASF3Q9UPY6 502 aa21.93■■□□□ 1.1
NEDD8-201ENST00000250495 CKAP5Q14008 2032 aa21.92■■□□□ 1.1
NEDD8-201ENST00000250495 PCDH15Q96QU1 1955 aa21.92■■□□□ 1.1
NEDD8-201ENST00000250495 A0A1B0GTW7 788 aa21.92■■□□□ 1.1
NEDD8-201ENST00000250495 KCNJ18B7U540 433 aa21.92■■□□□ 1.1
NEDD8-201ENST00000250495 PIK3R2O00459 728 aa21.92■■□□□ 1.1
NEDD8-201ENST00000250495 IRAK2O43187 625 aa21.92■■□□□ 1.1
NEDD8-201ENST00000250495 IGLV3-19P01714 112 aa21.92■■□□□ 1.1
NEDD8-201ENST00000250495 PROS1P07225 676 aa21.92■■□□□ 1.1
NEDD8-201ENST00000250495 BMP6P22004 513 aa21.92■■□□□ 1.1
NEDD8-201ENST00000250495 RDXP35241 583 aaKnown RBP21.92■■□□□ 1.1
NEDD8-201ENST00000250495 TBX4P57082 545 aa21.92■■□□□ 1.1
NEDD8-201ENST00000250495 RING1Q06587 406 aa21.92■■□□□ 1.1
NEDD8-201ENST00000250495 SLC14A1Q13336 389 aa21.92■■□□□ 1.1
NEDD8-201ENST00000250495 KIAA0907Q7Z7F0 614 aaPredicted RBP21.92■■□□□ 1.1
NEDD8-201ENST00000250495 AHI1Q8N157 1196 aa21.92■■□□□ 1.1
NEDD8-201ENST00000250495 DDX51Q8N8A6 666 aaKnown RBP eCLIP21.92■■□□□ 1.1
NEDD8-201ENST00000250495 OR2T3Q8NH03 318 aa21.92■■□□□ 1.1
NEDD8-201ENST00000250495 DDX50Q9BQ39 737 aaKnown RBP21.92■■□□□ 1.1
NEDD8-201ENST00000250495 ZDHHC5Q9C0B5 715 aa21.92■■□□□ 1.1
NEDD8-201ENST00000250495 ABCB8Q9NUT2 735 aa21.92■■□□□ 1.1
NEDD8-201ENST00000250495 GGA2Q9UJY4 613 aa21.92■■□□□ 1.1
NEDD8-201ENST00000250495 CTNND2Q9UQB3 1225 aa21.92■■□□□ 1.1
NEDD8-201ENST00000250495 CACNA1EQ15878 2313 aa21.92■■□□□ 1.1
NEDD8-201ENST00000250495 METTL12A8MUP2 240 aa21.91■■□□□ 1.1
NEDD8-201ENST00000250495 ACSL4O60488 711 aa21.91■■□□□ 1.1
NEDD8-201ENST00000250495 IGLV3-27P01718 113 aa21.91■■□□□ 1.1
NEDD8-201ENST00000250495 ATP5BP06576 529 aaKnown RBP21.91■■□□□ 1.1
NEDD8-201ENST00000250495 PABPC1P11940 636 aaKnown RBP21.91■■□□□ 1.1
NEDD8-201ENST00000250495 SIM1P81133 766 aaPredicted RBP21.91■■□□□ 1.1
NEDD8-201ENST00000250495 CAMK2GQ13555 558 aaPredicted RBP21.91■■□□□ 1.1
NEDD8-201ENST00000250495 FNDC3BQ53EP0 1204 aaKnown RBP21.91■■□□□ 1.1
NEDD8-201ENST00000250495 PIK3R6Q5UE93 754 aa21.91■■□□□ 1.1
NEDD8-201ENST00000250495 DCAF12L1Q5VU92 463 aa21.91■■□□□ 1.1
NEDD8-201ENST00000250495 ADIPOR2Q86V24 386 aa21.91■■□□□ 1.1
NEDD8-201ENST00000250495 ARHGEF19Q8IW93 802 aa21.91■■□□□ 1.1
NEDD8-201ENST00000250495 TRIM59Q8IWR1 403 aa21.91■■□□□ 1.1
NEDD8-201ENST00000250495 SCNM1Q9BWG6 230 aa21.91■■□□□ 1.1
NEDD8-201ENST00000250495 TMEM245Q9H330 911 aa21.91■■□□□ 1.1
NEDD8-201ENST00000250495 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.91■■□□□ 1.1
NEDD8-201ENST00000250495 SART1O43290 800 aaKnown RBP21.9■■□□□ 1.1
NEDD8-201ENST00000250495 TBL1XO60907 577 aa21.9■■□□□ 1.1
NEDD8-201ENST00000250495 FGFR1OPO95684 399 aaKnown RBP21.9■■□□□ 1.1
NEDD8-201ENST00000250495 AFPP02771 609 aaKnown RBP21.9■■□□□ 1.1
NEDD8-201ENST00000250495 HLA-EP13747 358 aa21.9■■□□□ 1.1
NEDD8-201ENST00000250495 POLR2EP19388 210 aaKnown RBP21.9■■□□□ 1.1
NEDD8-201ENST00000250495 MARSP56192 900 aaKnown RBP21.9■■□□□ 1.1
NEDD8-201ENST00000250495 STX17P56962 302 aa21.9■■□□□ 1.1
NEDD8-201ENST00000250495 PAK1Q13153 545 aa21.9■■□□□ 1.1
NEDD8-201ENST00000250495 MBLAC2Q68D91 279 aa21.9■■□□□ 1.1
NEDD8-201ENST00000250495 UNQ6494/PRO21346Q6UXR6 183 aa21.9■■□□□ 1.1
NEDD8-201ENST00000250495 OR2I1PQ8NGU4 316 aa21.9■■□□□ 1.1
NEDD8-201ENST00000250495 CLEC4CQ8WTT0 213 aa21.9■■□□□ 1.1
NEDD8-201ENST00000250495 CYB5D2Q8WUJ1 264 aa21.9■■□□□ 1.1
NEDD8-201ENST00000250495 SRRTQ9BXP5 876 aaKnown RBP21.9■■□□□ 1.1
NEDD8-201ENST00000250495 ADAM33Q9BZ11 813 aa21.9■■□□□ 1.1
NEDD8-201ENST00000250495 MIS12Q9H081 205 aa21.9■■□□□ 1.1
NEDD8-201ENST00000250495 MIR1-1HGQ9H1L0 117 aa21.9■■□□□ 1.1
NEDD8-201ENST00000250495 PCED1AQ9H1Q7 454 aa21.9■■□□□ 1.1
NEDD8-201ENST00000250495 FBRSQ9HAH7 460 aa21.9■■□□□ 1.1
NEDD8-201ENST00000250495 SUN2Q9UH99 717 aa21.9■■□□□ 1.1
NEDD8-201ENST00000250495 GOLGA6L7A0A1B0GV03 622 aa21.89■■□□□ 1.09
NEDD8-201ENST00000250495 SPAARA0A1B0GVQ0 90 aa21.89■■□□□ 1.09
NEDD8-201ENST00000250495 H0Y626 953 aa21.89■■□□□ 1.09
NEDD8-201ENST00000250495 BIN1O00499 593 aa21.89■■□□□ 1.09
NEDD8-201ENST00000250495 TRIM16O95361 564 aa21.89■■□□□ 1.09
NEDD8-201ENST00000250495 CALCAP01258 141 aa21.89■■□□□ 1.09
NEDD8-201ENST00000250495 DLDP09622 509 aaKnown RBP21.89■■□□□ 1.09
NEDD8-201ENST00000250495 CD59P13987 128 aa21.89■■□□□ 1.09
NEDD8-201ENST00000250495 SPINK2P20155 84 aa21.89■■□□□ 1.09
NEDD8-201ENST00000250495 ACADSBP45954 432 aa21.89■■□□□ 1.09
NEDD8-201ENST00000250495 RFWD3Q6PCD5 774 aa21.89■■□□□ 1.09
NEDD8-201ENST00000250495 SCUBE3Q8IX30 993 aa21.89■■□□□ 1.09
NEDD8-201ENST00000250495 SERPINB11Q96P15 392 aa21.89■■□□□ 1.09
NEDD8-201ENST00000250495 LHX5Q9H2C1 402 aa21.89■■□□□ 1.09
NEDD8-201ENST00000250495 ST7Q9NRC1 585 aa21.89■■□□□ 1.09
NEDD8-201ENST00000250495 CNTN6Q9UQ52 1028 aa21.89■■□□□ 1.09
NEDD8-201ENST00000250495 CEP295Q9C0D2 2601 aa21.88■■□□□ 1.09
NEDD8-201ENST00000250495 TYW5A2RUC4 315 aaKnown RBP21.88■■□□□ 1.09
NEDD8-201ENST00000250495 C1QTNF9BB2RNN3 333 aa21.88■■□□□ 1.09
NEDD8-201ENST00000250495 GJB3O75712 270 aa21.88■■□□□ 1.09
NEDD8-201ENST00000250495 TOP3BO95985 862 aaKnown RBP21.88■■□□□ 1.09
NEDD8-201ENST00000250495 C1QTNF9P0C862 333 aa21.88■■□□□ 1.09
NEDD8-201ENST00000250495 C7P10643 843 aa21.88■■□□□ 1.09
NEDD8-201ENST00000250495 KRT5P13647 590 aa21.88■■□□□ 1.09
NEDD8-201ENST00000250495 GPD2P43304 727 aa21.88■■□□□ 1.09
NEDD8-201ENST00000250495 RPL34P49207 117 aaKnown RBP21.88■■□□□ 1.09
NEDD8-201ENST00000250495 SGSHP51688 502 aa21.88■■□□□ 1.09
NEDD8-201ENST00000250495 ZBTB16Q05516 673 aa21.88■■□□□ 1.09
NEDD8-201ENST00000250495 NNTQ13423 1086 aa21.88■■□□□ 1.09
NEDD8-201ENST00000250495 PTPRNQ16849 979 aa21.88■■□□□ 1.09
NEDD8-201ENST00000250495 FAM133BQ5BKY9 247 aaKnown RBP21.88■■□□□ 1.09
NEDD8-201ENST00000250495 CACUL1Q86Y37 369 aa21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms