RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 ADAM23O75077 832 aa13.25□□□□□ -0.29
VPREB3-201ENST00000248948 GRAP2O75791 330 aa13.25□□□□□ -0.29
VPREB3-201ENST00000248948 ALDH1A2O94788 518 aa13.25□□□□□ -0.29
VPREB3-201ENST00000248948 UNGP13051 313 aaPredicted RBP13.25□□□□□ -0.29
VPREB3-201ENST00000248948 HNRNPLP14866 589 aaKnown RBP eCLIP13.25□□□□□ -0.29
VPREB3-201ENST00000248948 CHRNB2P17787 502 aa13.25□□□□□ -0.29
VPREB3-201ENST00000248948 NTSR1P30989 418 aa13.25□□□□□ -0.29
VPREB3-201ENST00000248948 SLC6A4P31645 630 aa13.25□□□□□ -0.29
VPREB3-201ENST00000248948 PITX1P78337 314 aaPredicted RBP13.25□□□□□ -0.29
VPREB3-201ENST00000248948 GEN1Q17RS7 908 aa13.25□□□□□ -0.29
VPREB3-201ENST00000248948 FIGNQ5HY92 759 aa13.25□□□□□ -0.29
VPREB3-201ENST00000248948 MS4A13Q5J8X5 152 aa13.25□□□□□ -0.29
VPREB3-201ENST00000248948 TTC39BQ5VTQ0 682 aaPredicted RBP13.25□□□□□ -0.29
VPREB3-201ENST00000248948 OTUD1Q5VV17 481 aaPredicted RBP13.25□□□□□ -0.29
VPREB3-201ENST00000248948 EGFLAMQ63HQ2 1017 aa13.25□□□□□ -0.29
VPREB3-201ENST00000248948 HEATR6Q6AI08 1181 aaKnown RBP13.25□□□□□ -0.29
VPREB3-201ENST00000248948 NADSYN1Q6IA69 706 aa13.25□□□□□ -0.29
VPREB3-201ENST00000248948 AHI1Q8N157 1196 aa13.25□□□□□ -0.29
VPREB3-201ENST00000248948 ATP6V0D2Q8N8Y2 350 aa13.25□□□□□ -0.29
VPREB3-201ENST00000248948 UCMAQ8WVF2 138 aa13.25□□□□□ -0.29
VPREB3-201ENST00000248948 GAB3Q8WWW8 586 aa13.25□□□□□ -0.29
VPREB3-201ENST00000248948 BAP1Q92560 729 aa13.25□□□□□ -0.29
VPREB3-201ENST00000248948 TMA16Q96EY4 203 aaKnown RBP13.25□□□□□ -0.29
VPREB3-201ENST00000248948 NPY6RQ99463 290 aa13.25□□□□□ -0.29
VPREB3-201ENST00000248948 GABRG3Q99928 467 aa13.25□□□□□ -0.29
VPREB3-201ENST00000248948 EDEM3Q9BZQ6 932 aa13.25□□□□□ -0.29
VPREB3-201ENST00000248948 TTYH3Q9C0H2 523 aa13.25□□□□□ -0.29
VPREB3-201ENST00000248948 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.25□□□□□ -0.29
VPREB3-201ENST00000248948 SLC12A6Q9UHW9 1150 aa13.25□□□□□ -0.29
VPREB3-201ENST00000248948 RAB23Q9ULC3 237 aa13.25□□□□□ -0.29
VPREB3-201ENST00000248948 GPR179Q6PRD1 2367 aa13.24□□□□□ -0.29
VPREB3-201ENST00000248948 NUP205Q92621 2012 aa13.24□□□□□ -0.29
VPREB3-201ENST00000248948 KCNU1A8MYU2 1149 aa13.24□□□□□ -0.29
VPREB3-201ENST00000248948 RPP40O75818 363 aaKnown RBP13.24□□□□□ -0.29
VPREB3-201ENST00000248948 MOCS2O96007 188 aaPredicted RBP13.24□□□□□ -0.29
VPREB3-201ENST00000248948 HOXB2P14652 356 aa13.24□□□□□ -0.29
VPREB3-201ENST00000248948 ABCB4P21439 1286 aa13.24□□□□□ -0.29
VPREB3-201ENST00000248948 HLA-FP30511 346 aa13.24□□□□□ -0.29
VPREB3-201ENST00000248948 NSFP46459 744 aaKnown RBP13.24□□□□□ -0.29
VPREB3-201ENST00000248948 SGSHP51688 502 aa13.24□□□□□ -0.29
VPREB3-201ENST00000248948 ENPP2Q13822 863 aa13.24□□□□□ -0.29
VPREB3-201ENST00000248948 NR1I3Q14994 352 aa13.24□□□□□ -0.29
VPREB3-201ENST00000248948 BRMS1LQ5PSV4 323 aa13.24□□□□□ -0.29
VPREB3-201ENST00000248948 LAIR1Q6GTX8 287 aa13.24□□□□□ -0.29
VPREB3-201ENST00000248948 SDE2Q6IQ49 451 aa13.24□□□□□ -0.29
VPREB3-201ENST00000248948 PPP1R2P3Q6NXS1 205 aa13.24□□□□□ -0.29
VPREB3-201ENST00000248948 MMS22LQ6ZRQ5 1243 aa13.24□□□□□ -0.29
VPREB3-201ENST00000248948 C11orf74Q86VG3 221 aa13.24□□□□□ -0.29
VPREB3-201ENST00000248948 CHSY1Q86X52 802 aa13.24□□□□□ -0.29
VPREB3-201ENST00000248948 CHPFQ8IZ52 775 aa13.24□□□□□ -0.29
VPREB3-201ENST00000248948 CCDC33Q8N5R6 958 aa13.24□□□□□ -0.29
VPREB3-201ENST00000248948 MDGA1Q8NFP4 955 aa13.24□□□□□ -0.29
VPREB3-201ENST00000248948 CPA5Q8WXQ8 436 aa13.24□□□□□ -0.29
VPREB3-201ENST00000248948 RUBCNQ92622 972 aa13.24□□□□□ -0.29
VPREB3-201ENST00000248948 NT5C3BQ969T7 300 aa13.24□□□□□ -0.29
VPREB3-201ENST00000248948 IQCDQ96DY2 449 aa13.24□□□□□ -0.29
VPREB3-201ENST00000248948 NUCKS1Q9H1E3 243 aaKnown RBP13.24□□□□□ -0.29
VPREB3-201ENST00000248948 HCN2Q9UL51 889 aa13.24□□□□□ -0.29
VPREB3-201ENST00000248948 WDR87Q6ZQQ6 2873 aa13.24□□□□□ -0.29
VPREB3-201ENST00000248948 EP300Q09472 2414 aaPredicted RBP13.23□□□□□ -0.29
VPREB3-201ENST00000248948 ANTXRLA6NF34 631 aa13.23□□□□□ -0.29
VPREB3-201ENST00000248948 LRRC53A6NM62 1247 aa13.23□□□□□ -0.29
VPREB3-201ENST00000248948 F5H5T6 163 aa13.23□□□□□ -0.29
VPREB3-201ENST00000248948 M0QYT0 321 aa13.23□□□□□ -0.29
VPREB3-201ENST00000248948 TSPAN3O60637 253 aa13.23□□□□□ -0.29
VPREB3-201ENST00000248948 TBL1XO60907 577 aa13.23□□□□□ -0.29
VPREB3-201ENST00000248948 F9P00740 461 aa13.23□□□□□ -0.29
VPREB3-201ENST00000248948 CALB1P05937 261 aa13.23□□□□□ -0.29
VPREB3-201ENST00000248948 PABPC1P11940 636 aaKnown RBP13.23□□□□□ -0.29
VPREB3-201ENST00000248948 FLT3P36888 993 aa13.23□□□□□ -0.29
VPREB3-201ENST00000248948 SULT1E1P49888 294 aa13.23□□□□□ -0.29
VPREB3-201ENST00000248948 FANCCQ00597 558 aa13.23□□□□□ -0.29
VPREB3-201ENST00000248948 ARID5AQ03989 594 aa13.23□□□□□ -0.29
VPREB3-201ENST00000248948 CDH18Q13634 790 aa13.23□□□□□ -0.29
VPREB3-201ENST00000248948 SIM2Q14190 667 aaPredicted RBP13.23□□□□□ -0.29
VPREB3-201ENST00000248948 CLEC16AQ2KHT3 1053 aa13.23□□□□□ -0.29
VPREB3-201ENST00000248948 SLC25A52Q3SY17 297 aa13.23□□□□□ -0.29
VPREB3-201ENST00000248948 ZC3H12AQ5D1E8 599 aaKnown RBP13.23□□□□□ -0.29
VPREB3-201ENST00000248948 ACBD5Q5T8D3 534 aaPredicted RBP13.23□□□□□ -0.29
VPREB3-201ENST00000248948 EMC10Q5UCC4 262 aa13.23□□□□□ -0.29
VPREB3-201ENST00000248948 ANO7Q6IWH7 933 aa13.23□□□□□ -0.29
VPREB3-201ENST00000248948 RFWD3Q6PCD5 774 aa13.23□□□□□ -0.29
VPREB3-201ENST00000248948 TMEM92Q6UXU6 159 aa13.23□□□□□ -0.29
VPREB3-201ENST00000248948 SND1Q7KZF4 910 aaKnown RBP eCLIP13.23□□□□□ -0.29
VPREB3-201ENST00000248948 BNIPLQ7Z465 357 aa13.23□□□□□ -0.29
VPREB3-201ENST00000248948 KIAA0907Q7Z7F0 614 aaPredicted RBP13.23□□□□□ -0.29
VPREB3-201ENST00000248948 PHF13Q86YI8 300 aaPredicted RBP13.23□□□□□ -0.29
VPREB3-201ENST00000248948 MFN1Q8IWA4 741 aa13.23□□□□□ -0.29
VPREB3-201ENST00000248948 NAP1L5Q96NT1 182 aaPredicted RBP13.23□□□□□ -0.29
VPREB3-201ENST00000248948 AGPAT1Q99943 283 aa13.23□□□□□ -0.29
VPREB3-201ENST00000248948 C11orf70Q9BRQ4 267 aa13.23□□□□□ -0.29
VPREB3-201ENST00000248948 CD248Q9HCU0 757 aa13.23□□□□□ -0.29
VPREB3-201ENST00000248948 METTL5Q9NRN9 209 aaKnown RBP13.23□□□□□ -0.29
VPREB3-201ENST00000248948 POLR3BQ9NW08 1133 aaPredicted RBP13.23□□□□□ -0.29
VPREB3-201ENST00000248948 GGA2Q9UJY4 613 aa13.23□□□□□ -0.29
VPREB3-201ENST00000248948 TMEM59LQ9UK28 342 aa13.23□□□□□ -0.29
VPREB3-201ENST00000248948 GMEB2Q9UKD1 530 aa13.23□□□□□ -0.29
VPREB3-201ENST00000248948 CLEC4EQ9ULY5 219 aa13.23□□□□□ -0.29
VPREB3-201ENST00000248948 THADAQ6YHU6 1953 aa13.23□□□□□ -0.29
VPREB3-201ENST00000248948 CHD5Q8TDI0 1954 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms