RNA–Protein interactions for RNA: ENST00000239374.7

CCDC170-201, Transcript of coiled-coil domain containing 170, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC170, Length 5,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170-201ENST00000239374 SMARCAD1Q9H4L7 1026 aa11.3□□□□□ -0.6
CCDC170-201ENST00000239374 SPDYE16A6NNV3 312 aaPredicted RBP11.29□□□□□ -0.6
CCDC170-201ENST00000239374 PMPCBO75439 489 aa11.29□□□□□ -0.6
CCDC170-201ENST00000239374 LYPLA2O95372 231 aa11.29□□□□□ -0.6
CCDC170-201ENST00000239374 ASS1P00966 412 aaKnown RBP11.29□□□□□ -0.6
CCDC170-201ENST00000239374 KLRC2P26717 231 aa11.29□□□□□ -0.6
CCDC170-201ENST00000239374 ACADSBP45954 432 aa11.29□□□□□ -0.6
CCDC170-201ENST00000239374 FOXD4Q12950 439 aaPredicted RBP11.29□□□□□ -0.6
CCDC170-201ENST00000239374 PEX6Q13608 980 aa11.29□□□□□ -0.6
CCDC170-201ENST00000239374 ATP1A4Q13733 1029 aa11.29□□□□□ -0.6
CCDC170-201ENST00000239374 SPDYE2Q495Y8 402 aa11.29□□□□□ -0.6
CCDC170-201ENST00000239374 GRTP1Q5TC63 336 aa11.29□□□□□ -0.6
CCDC170-201ENST00000239374 TMC7Q7Z402 723 aa11.29□□□□□ -0.6
CCDC170-201ENST00000239374 PTAR1Q7Z6K3 402 aaPredicted RBP11.29□□□□□ -0.6
CCDC170-201ENST00000239374 APPL2Q8NEU8 664 aa11.29□□□□□ -0.6
CCDC170-201ENST00000239374 GJD4Q96KN9 370 aaPredicted RBP11.29□□□□□ -0.6
CCDC170-201ENST00000239374 ZNF560Q96MR9 790 aa11.29□□□□□ -0.6
CCDC170-201ENST00000239374 CCDC167Q9P0B6 97 aa11.29□□□□□ -0.6
CCDC170-201ENST00000239374 UBDO15205 165 aa11.29□□□□□ -0.6
CCDC170-201ENST00000239374 GABRB2P47870 512 aa11.29□□□□□ -0.6
CCDC170-201ENST00000239374 ZNF143P52747 638 aaPredicted RBP11.29□□□□□ -0.6
CCDC170-201ENST00000239374 TMEM62Q0P6H9 643 aa11.29□□□□□ -0.6
CCDC170-201ENST00000239374 C6orf10Q5SRN2 563 aa11.29□□□□□ -0.6
CCDC170-201ENST00000239374 VWA5B1Q5TIE3 1220 aa11.29□□□□□ -0.6
CCDC170-201ENST00000239374 TWF2Q6IBS0 349 aaKnown RBP11.29□□□□□ -0.6
CCDC170-201ENST00000239374 ASRGL1Q7L266 308 aa11.29□□□□□ -0.6
CCDC170-201ENST00000239374 ZDHHC14Q8IZN3 488 aa11.29□□□□□ -0.6
CCDC170-201ENST00000239374 CCDC28BQ9BUN5 200 aa11.29□□□□□ -0.6
CCDC170-201ENST00000239374 PORCNQ9H237 461 aa11.29□□□□□ -0.6
CCDC170-201ENST00000239374 CYP3A43Q9HB55 503 aa11.29□□□□□ -0.6
CCDC170-201ENST00000239374 SARS2Q9NP81 518 aaKnown RBP11.29□□□□□ -0.6
CCDC170-201ENST00000239374 CDH22Q9UJ99 828 aa11.29□□□□□ -0.6
CCDC170-201ENST00000239374 SCN11AQ9UI33 1791 aa11.29□□□□□ -0.6
CCDC170-201ENST00000239374 C4AP0C0L4 1744 aa11.29□□□□□ -0.6
CCDC170-201ENST00000239374 C4BP0C0L5 1744 aa11.29□□□□□ -0.6
CCDC170-201ENST00000239374 DDHD2O94830 711 aa11.29□□□□□ -0.6
CCDC170-201ENST00000239374 CCNE2O96020 404 aa11.29□□□□□ -0.6
CCDC170-201ENST00000239374 ZNF23P17027 643 aa11.29□□□□□ -0.6
CCDC170-201ENST00000239374 EPHA3P29320 983 aa11.29□□□□□ -0.6
CCDC170-201ENST00000239374 GNL1P36915 607 aaPredicted RBP11.29□□□□□ -0.6
CCDC170-201ENST00000239374 CCNFP41002 786 aa11.29□□□□□ -0.6
CCDC170-201ENST00000239374 RAB27AP51159 221 aa11.29□□□□□ -0.6
CCDC170-201ENST00000239374 NRLP54845 237 aa11.29□□□□□ -0.6
CCDC170-201ENST00000239374 AQP4P55087 323 aa11.29□□□□□ -0.6
CCDC170-201ENST00000239374 ACTR3P61158 418 aa11.29□□□□□ -0.6
CCDC170-201ENST00000239374 GAD2Q05329 585 aa11.29□□□□□ -0.6
CCDC170-201ENST00000239374 TBCELQ5QJ74 424 aa11.29□□□□□ -0.6
CCDC170-201ENST00000239374 DRICH1Q6PGQ1 229 aaPredicted RBP11.29□□□□□ -0.6
CCDC170-201ENST00000239374 SATL1Q86VE3 508 aa11.29□□□□□ -0.6
CCDC170-201ENST00000239374 ZMAT2Q96NC0 199 aaKnown RBP11.29□□□□□ -0.6
CCDC170-201ENST00000239374 TSR3Q9UJK0 312 aaKnown RBP11.29□□□□□ -0.6
CCDC170-201ENST00000239374 BARX2Q9UMQ3 279 aaPredicted RBP11.29□□□□□ -0.6
CCDC170-201ENST00000239374 KAT6AQ92794 2004 aa11.29□□□□□ -0.6
CCDC170-201ENST00000239374 C16orf96A6NNT2 1141 aa11.29□□□□□ -0.6
CCDC170-201ENST00000239374 PHGDHO43175 533 aaKnown RBP11.29□□□□□ -0.6
CCDC170-201ENST00000239374 SIN3BO75182 1162 aa11.29□□□□□ -0.6
CCDC170-201ENST00000239374 C4BPAP04003 597 aaKnown RBP11.29□□□□□ -0.6
CCDC170-201ENST00000239374 CFHP08603 1231 aa11.29□□□□□ -0.6
CCDC170-201ENST00000239374 CYP2C8P10632 490 aa11.29□□□□□ -0.6
CCDC170-201ENST00000239374 RHBDF2Q6PJF5 856 aa11.29□□□□□ -0.6
CCDC170-201ENST00000239374 ENDOVQ8N8Q3 282 aaKnown RBP11.29□□□□□ -0.6
CCDC170-201ENST00000239374 LMO3Q8TAP4 145 aa11.29□□□□□ -0.6
CCDC170-201ENST00000239374 SLC7A6OSQ96CW6 309 aaPredicted RBP11.29□□□□□ -0.6
CCDC170-201ENST00000239374 RCN3Q96D15 328 aa11.29□□□□□ -0.6
CCDC170-201ENST00000239374 CPNE1Q99829 537 aa11.29□□□□□ -0.6
CCDC170-201ENST00000239374 EBF4Q9BQW3 602 aa11.29□□□□□ -0.6
CCDC170-201ENST00000239374 SPATA16Q9BXB7 569 aa11.29□□□□□ -0.6
CCDC170-201ENST00000239374 ST6GALNAC4Q9H4F1 302 aa11.29□□□□□ -0.6
CCDC170-201ENST00000239374 TRPC7Q9HCX4 862 aa11.29□□□□□ -0.6
CCDC170-201ENST00000239374 C6orf203Q9P0P8 240 aaPredicted RBP11.29□□□□□ -0.6
CCDC170-201ENST00000239374 CPSF3Q9UKF6 684 aaKnown RBP11.29□□□□□ -0.6
CCDC170-201ENST00000239374 ZNRF3Q9ULT6 936 aa11.29□□□□□ -0.6
CCDC170-201ENST00000239374 CST3P01034 146 aaPredicted RBP11.29□□□□□ -0.6
CCDC170-201ENST00000239374 JCHAINP01591 159 aa11.29□□□□□ -0.6
CCDC170-201ENST00000239374 ITGA2BP08514 1039 aa11.29□□□□□ -0.6
CCDC170-201ENST00000239374 SLC18A1P54219 525 aa11.29□□□□□ -0.6
CCDC170-201ENST00000239374 YWHAZP63104 245 aaKnown RBP11.29□□□□□ -0.6
CCDC170-201ENST00000239374 MOGSQ13724 837 aa11.29□□□□□ -0.6
CCDC170-201ENST00000239374 FUT11Q495W5 492 aa11.29□□□□□ -0.6
CCDC170-201ENST00000239374 TXNRD3NBQ6F5E7 133 aa11.29□□□□□ -0.6
CCDC170-201ENST00000239374 CMC1Q7Z7K0 106 aa11.29□□□□□ -0.6
CCDC170-201ENST00000239374 FBXW8Q8N3Y1 598 aa11.29□□□□□ -0.6
CCDC170-201ENST00000239374 ATPAF2Q8N5M1 289 aa11.29□□□□□ -0.6
CCDC170-201ENST00000239374 SNRNP25Q9BV90 132 aaKnown RBP11.29□□□□□ -0.6
CCDC170-201ENST00000239374 PCDHA11Q9Y5I1 949 aa11.29□□□□□ -0.6
CCDC170-201ENST00000239374 RPL14P50914 215 aaKnown RBP11.28□□□□□ -0.6
CCDC170-201ENST00000239374 MAPK10P53779 464 aa11.28□□□□□ -0.6
CCDC170-201ENST00000239374 TGFB2P61812 414 aa11.28□□□□□ -0.6
CCDC170-201ENST00000239374 CSHL1Q14406 222 aa11.28□□□□□ -0.6
CCDC170-201ENST00000239374 EML3Q32P44 896 aa11.28□□□□□ -0.6
CCDC170-201ENST00000239374 VSIG10LQ86VR7 867 aa11.28□□□□□ -0.6
CCDC170-201ENST00000239374 IFT43Q96FT9 208 aa11.28□□□□□ -0.6
CCDC170-201ENST00000239374 TSPAN17Q96FV3 270 aa11.28□□□□□ -0.6
CCDC170-201ENST00000239374 DCUN1D1Q96GG9 259 aa11.28□□□□□ -0.6
CCDC170-201ENST00000239374 ZNF395Q9H8N7 513 aaPredicted RBP11.28□□□□□ -0.6
CCDC170-201ENST00000239374 PPM1HQ9ULR3 514 aa11.28□□□□□ -0.6
CCDC170-201ENST00000239374 EFR3BQ9Y2G0 817 aa11.28□□□□□ -0.6
CCDC170-201ENST00000239374 RGSL1A5PLK6 1076 aa11.28□□□□□ -0.6
CCDC170-201ENST00000239374 MTSS1O43312 755 aa11.28□□□□□ -0.6
CCDC170-201ENST00000239374 MPOP05164 745 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms