RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 SAGE1Q9NXZ1 904 aa24■■□□□ 1.43
MSX2-201ENST00000239243 SMG5Q9UPR3 1016 aaKnown RBP24■■□□□ 1.43
MSX2-201ENST00000239243 PRG3Q9Y2Y8 225 aaPredicted RBP24■■□□□ 1.43
MSX2-201ENST00000239243 PITPNM1O00562 1244 aa23.99■■□□□ 1.43
MSX2-201ENST00000239243 SERPINB6P35237 376 aa23.99■■□□□ 1.43
MSX2-201ENST00000239243 SYCP2LQ5T4T6 812 aa23.99■■□□□ 1.43
MSX2-201ENST00000239243 CAND1Q86VP6 1230 aaKnown RBP23.99■■□□□ 1.43
MSX2-201ENST00000239243 CCNYQ8ND76 341 aa23.99■■□□□ 1.43
MSX2-201ENST00000239243 APBB2Q92870 758 aa23.99■■□□□ 1.43
MSX2-201ENST00000239243 RNF34Q969K3 372 aa23.99■■□□□ 1.43
MSX2-201ENST00000239243 P2RY11Q96G91 374 aa23.99■■□□□ 1.43
MSX2-201ENST00000239243 NSRP1Q9H0G5 558 aaKnown RBP23.99■■□□□ 1.43
MSX2-201ENST00000239243 TRABDQ9H4I3 376 aa23.99■■□□□ 1.43
MSX2-201ENST00000239243 PRDM12Q9H4Q4 367 aa23.99■■□□□ 1.43
MSX2-201ENST00000239243 FAM47DPA6NHR8 397 aa23.99■■□□□ 1.43
MSX2-201ENST00000239243 FAM72CH0Y354 149 aa23.99■■□□□ 1.43
MSX2-201ENST00000239243 FAM72AQ5TYM5 149 aa23.99■■□□□ 1.43
MSX2-201ENST00000239243 GKAP1Q5VSY0 366 aaPredicted RBP23.99■■□□□ 1.43
MSX2-201ENST00000239243 BTBD8Q5XKL5 378 aa23.99■■□□□ 1.43
MSX2-201ENST00000239243 FAM72DQ6L9T8 149 aa23.99■■□□□ 1.43
MSX2-201ENST00000239243 FAM72BQ86X60 149 aa23.99■■□□□ 1.43
MSX2-201ENST00000239243 CCDC33Q8N5R6 958 aa23.99■■□□□ 1.43
MSX2-201ENST00000239243 ANKRD42Q8N9B4 389 aa23.99■■□□□ 1.43
MSX2-201ENST00000239243 SEPT8Q92599 483 aa23.99■■□□□ 1.43
MSX2-201ENST00000239243 ANLNQ9NQW6 1124 aa23.99■■□□□ 1.43
MSX2-201ENST00000239243 EIF2B3Q9NR50 452 aaKnown RBP23.99■■□□□ 1.43
MSX2-201ENST00000239243 RNF103O00237 685 aa23.98■■□□□ 1.43
MSX2-201ENST00000239243 ENPP3O14638 875 aa23.98■■□□□ 1.43
MSX2-201ENST00000239243 TNFRSF10BO14763 440 aa23.98■■□□□ 1.43
MSX2-201ENST00000239243 PRPF4O43172 522 aaKnown RBP eCLIP23.98■■□□□ 1.43
MSX2-201ENST00000239243 NBNO60934 754 aa23.98■■□□□ 1.43
MSX2-201ENST00000239243 IGLV3-25P01717 112 aa23.98■■□□□ 1.43
MSX2-201ENST00000239243 MX2P20592 715 aa23.98■■□□□ 1.43
MSX2-201ENST00000239243 DRD4P21917 467 aa23.98■■□□□ 1.43
MSX2-201ENST00000239243 MAGEA3P43357 314 aa23.98■■□□□ 1.43
MSX2-201ENST00000239243 MTM1Q13496 603 aa23.98■■□□□ 1.43
MSX2-201ENST00000239243 BRMS1LQ5PSV4 323 aa23.98■■□□□ 1.43
MSX2-201ENST00000239243 IGDCC3Q8IVU1 814 aa23.98■■□□□ 1.43
MSX2-201ENST00000239243 DBF4BQ8NFT6 615 aa23.98■■□□□ 1.43
MSX2-201ENST00000239243 SCAMP5Q8TAC9 235 aa23.98■■□□□ 1.43
MSX2-201ENST00000239243 DNAJB4Q9UDY4 337 aa23.98■■□□□ 1.43
MSX2-201ENST00000239243 OR12D3Q9UGF7 316 aa23.98■■□□□ 1.43
MSX2-201ENST00000239243 IKBKGQ9Y6K9 419 aa23.98■■□□□ 1.43
MSX2-201ENST00000239243 ATXN2Q99700 1313 aaKnown RBP23.98■■□□□ 1.43
MSX2-201ENST00000239243 TCRBV9S1A1TA0A576 114 aa23.98■■□□□ 1.43
MSX2-201ENST00000239243 AVILO75366 819 aa23.98■■□□□ 1.43
MSX2-201ENST00000239243 IFNAR2P48551 515 aa23.98■■□□□ 1.43
MSX2-201ENST00000239243 PKN2Q16513 984 aaKnown RBP23.98■■□□□ 1.43
MSX2-201ENST00000239243 MGARPQ8TDB4 240 aa23.98■■□□□ 1.43
MSX2-201ENST00000239243 OSBPL2Q9H1P3 480 aa23.98■■□□□ 1.43
MSX2-201ENST00000239243 SSU72Q9NP77 194 aaKnown RBP23.98■■□□□ 1.43
MSX2-201ENST00000239243 ZC3H7BQ9UGR2 993 aaKnown RBP23.98■■□□□ 1.43
MSX2-201ENST00000239243 HTTP42858 3142 aa23.97■■□□□ 1.43
MSX2-201ENST00000239243 I6L893 689 aaPredicted RBP23.97■■□□□ 1.43
MSX2-201ENST00000239243 TRIM66O15016 1216 aa23.97■■□□□ 1.43
MSX2-201ENST00000239243 MTSS1O43312 755 aa23.97■■□□□ 1.43
MSX2-201ENST00000239243 HOXA2O43364 376 aa23.97■■□□□ 1.43
MSX2-201ENST00000239243 MLNP12872 115 aa23.97■■□□□ 1.43
MSX2-201ENST00000239243 SRLQ86TD4 932 aa23.97■■□□□ 1.43
MSX2-201ENST00000239243 COLGALT1Q8NBJ5 622 aa23.97■■□□□ 1.43
MSX2-201ENST00000239243 ABI2Q9NYB9 513 aaPredicted RBP23.97■■□□□ 1.43
MSX2-201ENST00000239243 ADAM28Q9UKQ2 775 aa23.97■■□□□ 1.43
MSX2-201ENST00000239243 FOXO6A8MYZ6 492 aa23.96■■□□□ 1.43
MSX2-201ENST00000239243 TRDMT1O14717 391 aaKnown RBP23.96■■□□□ 1.43
MSX2-201ENST00000239243 IRAK2O43187 625 aa23.96■■□□□ 1.43
MSX2-201ENST00000239243 CPP00450 1065 aa23.96■■□□□ 1.43
MSX2-201ENST00000239243 GBP2P32456 591 aaPredicted RBP23.96■■□□□ 1.43
MSX2-201ENST00000239243 PARP6Q2NL67 630 aa23.96■■□□□ 1.43
MSX2-201ENST00000239243 VARS2Q5ST30 1063 aaKnown RBP23.96■■□□□ 1.43
MSX2-201ENST00000239243 DENND5BQ6ZUT9 1274 aa23.96■■□□□ 1.43
MSX2-201ENST00000239243 TAX1BP1Q86VP1 789 aa23.96■■□□□ 1.43
MSX2-201ENST00000239243 SCN4BQ8IWT1 228 aa23.96■■□□□ 1.43
MSX2-201ENST00000239243 MRRFQ96E11 262 aaKnown RBP23.96■■□□□ 1.43
MSX2-201ENST00000239243 SMOC2Q9H3U7 446 aa23.96■■□□□ 1.43
MSX2-201ENST00000239243 LRFN2Q9ULH4 789 aa23.96■■□□□ 1.43
MSX2-201ENST00000239243 TRIM17Q9Y577 477 aa23.96■■□□□ 1.43
MSX2-201ENST00000239243 OR4Q2P0C623 313 aa23.96■■□□□ 1.43
MSX2-201ENST00000239243 HTR7P34969 479 aa23.96■■□□□ 1.43
MSX2-201ENST00000239243 EIF4EBP2Q13542 120 aaPredicted RBP23.96■■□□□ 1.43
MSX2-201ENST00000239243 LRRC14Q15048 493 aa23.96■■□□□ 1.43
MSX2-201ENST00000239243 C8orf48Q96LL4 319 aa23.96■■□□□ 1.43
MSX2-201ENST00000239243 ARHGEF38Q9NXL2 777 aa23.96■■□□□ 1.43
MSX2-201ENST00000239243 RRP15Q9Y3B9 282 aaKnown RBP23.96■■□□□ 1.43
MSX2-201ENST00000239243 PCDHB5Q9Y5E4 795 aa23.96■■□□□ 1.43
MSX2-201ENST00000239243 EPHB2P29323 1055 aa23.95■■□□□ 1.42
MSX2-201ENST00000239243 IFRD2Q12894 506 aaPredicted RBP23.95■■□□□ 1.42
MSX2-201ENST00000239243 EFTUD2Q15029 972 aaKnown RBP eCLIP23.95■■□□□ 1.42
MSX2-201ENST00000239243 ZNF280DQ6N043 979 aa23.95■■□□□ 1.42
MSX2-201ENST00000239243 CACNA2D3Q8IZS8 1091 aa23.95■■□□□ 1.42
MSX2-201ENST00000239243 CKAP2Q8WWK9 683 aa23.95■■□□□ 1.42
MSX2-201ENST00000239243 CFAP36Q96G28 342 aa23.95■■□□□ 1.42
MSX2-201ENST00000239243 HAPLN3Q96S86 360 aa23.95■■□□□ 1.42
MSX2-201ENST00000239243 FBXO44Q9H4M3 255 aa23.95■■□□□ 1.42
MSX2-201ENST00000239243 ZNF638Q14966 1978 aaKnown RBP23.95■■□□□ 1.42
MSX2-201ENST00000239243 IQANK1A0A1B0GTG1 560 aa23.95■■□□□ 1.42
MSX2-201ENST00000239243 OR6C75A6NL08 312 aa23.95■■□□□ 1.42
MSX2-201ENST00000239243 VIMP08670 466 aaKnown RBP23.95■■□□□ 1.42
MSX2-201ENST00000239243 PPIDQ08752 370 aaKnown RBP23.95■■□□□ 1.42
MSX2-201ENST00000239243 MPP2Q14168 576 aa23.95■■□□□ 1.42
MSX2-201ENST00000239243 QPCTQ16769 361 aa23.95■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms