RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 MRPL10Q7Z7H8 261 aaKnown RBP16.67■□□□□ 0.26
UBE3D-201ENST00000237186 RSPH3Q86UC2 560 aa16.67■□□□□ 0.26
UBE3D-201ENST00000237186 TRIM42Q8IWZ5 723 aa16.67■□□□□ 0.26
UBE3D-201ENST00000237186 STAMBPL1Q96FJ0 436 aa16.67■□□□□ 0.26
UBE3D-201ENST00000237186 THOC1Q96FV9 657 aaKnown RBP16.67■□□□□ 0.26
UBE3D-201ENST00000237186 NAT9Q9BTE0 207 aa16.67■□□□□ 0.26
UBE3D-201ENST00000237186 TRIM55Q9BYV6 548 aa16.67■□□□□ 0.26
UBE3D-201ENST00000237186 ULBP1Q9BZM6 244 aa16.67■□□□□ 0.26
UBE3D-201ENST00000237186 PRDM12Q9H4Q4 367 aa16.67■□□□□ 0.26
UBE3D-201ENST00000237186 CD248Q9HCU0 757 aa16.67■□□□□ 0.26
UBE3D-201ENST00000237186 WDR6Q9NNW5 1121 aaKnown RBP16.67■□□□□ 0.26
UBE3D-201ENST00000237186 NPHS2Q9NP85 383 aa16.67■□□□□ 0.26
UBE3D-201ENST00000237186 KRT82Q9NSB4 513 aa16.67■□□□□ 0.26
UBE3D-201ENST00000237186 PIGVQ9NUD9 493 aa16.67■□□□□ 0.26
UBE3D-201ENST00000237186 KANSL3Q9P2N6 904 aa16.67■□□□□ 0.26
UBE3D-201ENST00000237186 CDH9Q9ULB4 789 aa16.67■□□□□ 0.26
UBE3D-201ENST00000237186 MEIS3P2A8K0S8 358 aa16.66■□□□□ 0.26
UBE3D-201ENST00000237186 RPLP2P05387 115 aaKnown RBP16.66■□□□□ 0.26
UBE3D-201ENST00000237186 KRT16P08779 473 aa16.66■□□□□ 0.26
UBE3D-201ENST00000237186 RARBP10826 455 aa16.66■□□□□ 0.26
UBE3D-201ENST00000237186 CRHR1P34998 444 aa16.66■□□□□ 0.26
UBE3D-201ENST00000237186 MLH1P40692 756 aa16.66■□□□□ 0.26
UBE3D-201ENST00000237186 ZNF135P52742 658 aaPredicted RBP16.66■□□□□ 0.26
UBE3D-201ENST00000237186 INHBEP58166 350 aa16.66■□□□□ 0.26
UBE3D-201ENST00000237186 DENND5BQ6ZUT9 1274 aa16.66■□□□□ 0.26
UBE3D-201ENST00000237186 PDZD4Q76G19 769 aaPredicted RBP16.66■□□□□ 0.26
UBE3D-201ENST00000237186 FAM35AQ86V20 835 aa16.66■□□□□ 0.26
UBE3D-201ENST00000237186 RNF169Q8NCN4 708 aa16.66■□□□□ 0.26
UBE3D-201ENST00000237186 ZMIZ2Q8NF64 920 aa16.66■□□□□ 0.26
UBE3D-201ENST00000237186 ARNTL2Q8WYA1 636 aa16.66■□□□□ 0.26
UBE3D-201ENST00000237186 PCED1BQ96HM7 432 aa16.66■□□□□ 0.26
UBE3D-201ENST00000237186 GAD1Q99259 594 aa16.66■□□□□ 0.26
UBE3D-201ENST00000237186 SENP6Q9GZR1 1112 aaPredicted RBP16.66■□□□□ 0.26
UBE3D-201ENST00000237186 MIOSQ9NXC5 875 aa16.66■□□□□ 0.26
UBE3D-201ENST00000237186 FBXW11Q9UKB1 542 aa16.66■□□□□ 0.26
UBE3D-201ENST00000237186 MYBPHLA2RUH7 354 aa16.65■□□□□ 0.26
UBE3D-201ENST00000237186 MYADML2A6NDP7 307 aa16.65■□□□□ 0.26
UBE3D-201ENST00000237186 YJEFN3A6XGL0 299 aa16.65■□□□□ 0.26
UBE3D-201ENST00000237186 E7ENQ6 273 aa16.65■□□□□ 0.26
UBE3D-201ENST00000237186 RNF103O00237 685 aa16.65■□□□□ 0.26
UBE3D-201ENST00000237186 EEF2KO00418 725 aaKnown RBP16.65■□□□□ 0.26
UBE3D-201ENST00000237186 NCAM2O15394 837 aa16.65■□□□□ 0.26
UBE3D-201ENST00000237186 UGT1A9O60656 530 aa16.65■□□□□ 0.26
UBE3D-201ENST00000237186 HNRNPCL1O60812 293 aaKnown RBP16.65■□□□□ 0.26
UBE3D-201ENST00000237186 AP1G2O75843 785 aa16.65■□□□□ 0.26
UBE3D-201ENST00000237186 RASSF2P50749 326 aa16.65■□□□□ 0.26
UBE3D-201ENST00000237186 NKX3-2P78367 333 aa16.65■□□□□ 0.26
UBE3D-201ENST00000237186 NAB1Q13506 487 aa16.65■□□□□ 0.26
UBE3D-201ENST00000237186 STXBP5Q5T5C0 1151 aa16.65■□□□□ 0.26
UBE3D-201ENST00000237186 WLSQ5T9L3 541 aa16.65■□□□□ 0.26
UBE3D-201ENST00000237186 ZNF449Q6P9G9 518 aa16.65■□□□□ 0.26
UBE3D-201ENST00000237186 MARK2Q7KZI7 788 aaKnown RBP16.65■□□□□ 0.26
UBE3D-201ENST00000237186 KIF2BQ8N4N8 673 aa16.65■□□□□ 0.26
UBE3D-201ENST00000237186 CCDC33Q8N5R6 958 aa16.65■□□□□ 0.26
UBE3D-201ENST00000237186 RAB3IL1Q8TBN0 382 aa16.65■□□□□ 0.26
UBE3D-201ENST00000237186 IQCGQ9H095 443 aaKnown RBP16.65■□□□□ 0.26
UBE3D-201ENST00000237186 BRD8Q9H0E9 1235 aa16.65■□□□□ 0.26
UBE3D-201ENST00000237186 UGT1A7Q9HAW7 530 aa16.65■□□□□ 0.26
UBE3D-201ENST00000237186 UGT1A10Q9HAW8 530 aa16.65■□□□□ 0.26
UBE3D-201ENST00000237186 UGT1A8Q9HAW9 530 aa16.65■□□□□ 0.26
UBE3D-201ENST00000237186 KCNK13Q9HB14 408 aa16.65■□□□□ 0.26
UBE3D-201ENST00000237186 CSNK1G1Q9HCP0 422 aa16.65■□□□□ 0.26
UBE3D-201ENST00000237186 TMPRSS4Q9NRS4 437 aa16.65■□□□□ 0.26
UBE3D-201ENST00000237186 SIRPGQ9P1W8 387 aa16.65■□□□□ 0.26
UBE3D-201ENST00000237186 MTO1Q9Y2Z2 717 aaKnown RBP16.65■□□□□ 0.26
UBE3D-201ENST00000237186 NR2E3Q9Y5X4 410 aa16.65■□□□□ 0.26
UBE3D-201ENST00000237186 HHLA1C9JL84 531 aa16.65■□□□□ 0.26
UBE3D-201ENST00000237186 CAPN9O14815 690 aa16.65■□□□□ 0.26
UBE3D-201ENST00000237186 DNAJC6O75061 913 aa16.65■□□□□ 0.26
UBE3D-201ENST00000237186 CLCNKBP51801 687 aa16.65■□□□□ 0.26
UBE3D-201ENST00000237186 AP1B1Q10567 949 aa16.65■□□□□ 0.26
UBE3D-201ENST00000237186 NME3Q13232 169 aa16.65■□□□□ 0.26
UBE3D-201ENST00000237186 INTS6LQ5JSJ4 861 aaKnown RBP16.65■□□□□ 0.26
UBE3D-201ENST00000237186 PDCD7Q8N8D1 485 aaKnown RBP16.65■□□□□ 0.26
UBE3D-201ENST00000237186 TRPV1Q8NER1 839 aa16.65■□□□□ 0.26
UBE3D-201ENST00000237186 ACMSDQ8TDX5 336 aa16.65■□□□□ 0.26
UBE3D-201ENST00000237186 RAB3IPQ96QF0 476 aaPredicted RBP16.65■□□□□ 0.26
UBE3D-201ENST00000237186 ALG13Q9NP73 1137 aaKnown RBP16.65■□□□□ 0.26
UBE3D-201ENST00000237186 BAIAP2L1Q9UHR4 511 aa16.65■□□□□ 0.26
UBE3D-201ENST00000237186 TRIM33Q9UPN9 1127 aa16.65■□□□□ 0.26
UBE3D-201ENST00000237186 TLL2Q9Y6L7 1015 aa16.65■□□□□ 0.26
UBE3D-201ENST00000237186 WDR27A2RRH5 827 aa16.64■□□□□ 0.25
UBE3D-201ENST00000237186 ARL5CA6NH57 179 aa16.64■□□□□ 0.25
UBE3D-201ENST00000237186 FAM155AB1AL88 458 aaPredicted RBP16.64■□□□□ 0.25
UBE3D-201ENST00000237186 CREB3O43889 395 aa16.64■□□□□ 0.25
UBE3D-201ENST00000237186 ZNF623O75123 536 aa16.64■□□□□ 0.25
UBE3D-201ENST00000237186 F9P00740 461 aa16.64■□□□□ 0.25
UBE3D-201ENST00000237186 CHRNA1P02708 482 aa16.64■□□□□ 0.25
UBE3D-201ENST00000237186 DLDP09622 509 aaKnown RBP16.64■□□□□ 0.25
UBE3D-201ENST00000237186 C6orf222P0C671 652 aaPredicted RBP16.64■□□□□ 0.25
UBE3D-201ENST00000237186 PGAM1P18669 254 aa16.64■□□□□ 0.25
UBE3D-201ENST00000237186 MGAT3Q09327 533 aa16.64■□□□□ 0.25
UBE3D-201ENST00000237186 NIPAL4Q0D2K0 466 aa16.64■□□□□ 0.25
UBE3D-201ENST00000237186 DBN1Q16643 649 aa16.64■□□□□ 0.25
UBE3D-201ENST00000237186 CTC1Q2NKJ3 1217 aa16.64■□□□□ 0.25
UBE3D-201ENST00000237186 AGMOQ6ZNB7 445 aa16.64■□□□□ 0.25
UBE3D-201ENST00000237186 SERINC5Q86VE9 423 aa16.64■□□□□ 0.25
UBE3D-201ENST00000237186 ZNF567Q8N184 647 aa16.64■□□□□ 0.25
UBE3D-201ENST00000237186 RFWD2Q8NHY2 731 aa16.64■□□□□ 0.25
UBE3D-201ENST00000237186 SLC7A14Q8TBB6 771 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms