RNA–Protein interactions for RNA: ENST00000225441.11

RUNDC3A-201, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-201ENST00000225441 MLNP12872 115 aa25.7■■□□□ 1.71
RUNDC3A-201ENST00000225441 SCYL2Q6P3W7 929 aa25.7■■□□□ 1.71
RUNDC3A-201ENST00000225441 HACE1Q8IYU2 909 aa25.7■■□□□ 1.71
RUNDC3A-201ENST00000225441 SMG8Q8ND04 991 aaKnown RBP25.7■■□□□ 1.71
RUNDC3A-201ENST00000225441 KHSRPQ92945 711 aaKnown RBP eCLIP25.7■■□□□ 1.71
RUNDC3A-201ENST00000225441 TTC17Q96AE7 1141 aa25.7■■□□□ 1.71
RUNDC3A-201ENST00000225441 ZNF570Q96NI8 536 aa25.7■■□□□ 1.71
RUNDC3A-201ENST00000225441 EBNA1BP2Q99848 306 aaKnown RBP25.7■■□□□ 1.71
RUNDC3A-201ENST00000225441 SIKE1Q9BRV8 207 aa25.7■■□□□ 1.71
RUNDC3A-201ENST00000225441 NGRNQ9NPE2 291 aaKnown RBP25.7■■□□□ 1.71
RUNDC3A-201ENST00000225441 RALGAPA2Q2PPJ7 1873 aa25.7■■□□□ 1.7
RUNDC3A-201ENST00000225441 RECQL4O94761 1208 aa25.7■■□□□ 1.7
RUNDC3A-201ENST00000225441 BGNP21810 368 aa25.7■■□□□ 1.7
RUNDC3A-201ENST00000225441 RPL34P49207 117 aaKnown RBP25.7■■□□□ 1.7
RUNDC3A-201ENST00000225441 TBCCQ15814 346 aa25.7■■□□□ 1.7
RUNDC3A-201ENST00000225441 C4orf50Q6ZRC1 276 aa25.7■■□□□ 1.7
RUNDC3A-201ENST00000225441 CTAGE3PQ8IX95 158 aa25.7■■□□□ 1.7
RUNDC3A-201ENST00000225441 KIF12Q96FN5 646 aa25.7■■□□□ 1.7
RUNDC3A-201ENST00000225441 APOL6Q9BWW8 343 aa25.7■■□□□ 1.7
RUNDC3A-201ENST00000225441 SIRPGQ9P1W8 387 aa25.7■■□□□ 1.7
RUNDC3A-201ENST00000225441 RCOR3Q9P2K3 495 aaPredicted RBP25.7■■□□□ 1.7
RUNDC3A-201ENST00000225441 IBSPP21815 317 aaPredicted RBP25.69■■□□□ 1.7
RUNDC3A-201ENST00000225441 CRHR1P34998 444 aa25.69■■□□□ 1.7
RUNDC3A-201ENST00000225441 OVGP1Q12889 678 aa25.69■■□□□ 1.7
RUNDC3A-201ENST00000225441 NAB1Q13506 487 aa25.69■■□□□ 1.7
RUNDC3A-201ENST00000225441 CDO1Q16878 200 aa25.69■■□□□ 1.7
RUNDC3A-201ENST00000225441 PMF1Q6P1K2 205 aa25.69■■□□□ 1.7
RUNDC3A-201ENST00000225441 SLC26A9Q7LBE3 791 aa25.69■■□□□ 1.7
RUNDC3A-201ENST00000225441 PRPF39Q86UA1 669 aaKnown RBP25.69■■□□□ 1.7
RUNDC3A-201ENST00000225441 CCNJLQ8IV13 435 aa25.69■■□□□ 1.7
RUNDC3A-201ENST00000225441 PSTKQ8IV42 348 aaKnown RBP25.69■■□□□ 1.7
RUNDC3A-201ENST00000225441 OXNAD1Q96HP4 312 aaPredicted RBP25.69■■□□□ 1.7
RUNDC3A-201ENST00000225441 TSPAN18Q96SJ8 248 aa25.69■■□□□ 1.7
RUNDC3A-201ENST00000225441 C11orf84Q9BUA3 381 aaPredicted RBP25.69■■□□□ 1.7
RUNDC3A-201ENST00000225441 HEY1Q9Y5J3 304 aa25.69■■□□□ 1.7
RUNDC3A-201ENST00000225441 RFPL1O75677 317 aa25.68■■□□□ 1.7
RUNDC3A-201ENST00000225441 AKAP5P24588 427 aa25.68■■□□□ 1.7
RUNDC3A-201ENST00000225441 CYP2F1P24903 491 aa25.68■■□□□ 1.7
RUNDC3A-201ENST00000225441 FDFT1P37268 417 aa25.68■■□□□ 1.7
RUNDC3A-201ENST00000225441 GJA8P48165 433 aa25.68■■□□□ 1.7
RUNDC3A-201ENST00000225441 SEMA5AQ13591 1074 aa25.68■■□□□ 1.7
RUNDC3A-201ENST00000225441 PPP1R26Q5T8A7 1209 aaPredicted RBP25.68■■□□□ 1.7
RUNDC3A-201ENST00000225441 ACMSDQ8TDX5 336 aa25.68■■□□□ 1.7
RUNDC3A-201ENST00000225441 SIGLEC10Q96LC7 697 aa25.68■■□□□ 1.7
RUNDC3A-201ENST00000225441 QKIQ96PU8 341 aaKnown RBP eCLIP25.68■■□□□ 1.7
RUNDC3A-201ENST00000225441 RNF39Q9H2S5 420 aa25.68■■□□□ 1.7
RUNDC3A-201ENST00000225441 DENND2DQ9H6A0 471 aaPredicted RBP25.68■■□□□ 1.7
RUNDC3A-201ENST00000225441 DONSONQ9NYP3 566 aa25.68■■□□□ 1.7
RUNDC3A-201ENST00000225441 PCDHA11Q9Y5I1 949 aa25.68■■□□□ 1.7
RUNDC3A-201ENST00000225441 CITO14578 2027 aa25.68■■□□□ 1.7
RUNDC3A-201ENST00000225441 GSC2O15499 205 aa25.67■■□□□ 1.7
RUNDC3A-201ENST00000225441 PQBP1O60828 265 aaKnown RBP25.67■■□□□ 1.7
RUNDC3A-201ENST00000225441 APRTP07741 180 aa25.67■■□□□ 1.7
RUNDC3A-201ENST00000225441 ACADSBP45954 432 aa25.67■■□□□ 1.7
RUNDC3A-201ENST00000225441 ATN1P54259 1190 aaPredicted RBP25.67■■□□□ 1.7
RUNDC3A-201ENST00000225441 BFSP2Q13515 415 aa25.67■■□□□ 1.7
RUNDC3A-201ENST00000225441 DSC3Q14574 896 aa25.67■■□□□ 1.7
RUNDC3A-201ENST00000225441 MBTPS1Q14703 1052 aa25.67■■□□□ 1.7
RUNDC3A-201ENST00000225441 NAA25Q14CX7 972 aa25.67■■□□□ 1.7
RUNDC3A-201ENST00000225441 ALKAL1Q6UXT8 129 aa25.67■■□□□ 1.7
RUNDC3A-201ENST00000225441 SLC39A5Q6ZMH5 540 aa25.67■■□□□ 1.7
RUNDC3A-201ENST00000225441 DPH6Q7L8W6 267 aa25.67■■□□□ 1.7
RUNDC3A-201ENST00000225441 TTC30AQ86WT1 665 aa25.67■■□□□ 1.7
RUNDC3A-201ENST00000225441 E2F7Q96AV8 911 aa25.67■■□□□ 1.7
RUNDC3A-201ENST00000225441 CADM1Q9BY67 442 aaKnown RBP25.67■■□□□ 1.7
RUNDC3A-201ENST00000225441 CXCL16Q9H2A7 254 aa25.67■■□□□ 1.7
RUNDC3A-201ENST00000225441 FAM105AQ9NUU6 356 aa25.67■■□□□ 1.7
RUNDC3A-201ENST00000225441 STOML1Q9UBI4 398 aa25.67■■□□□ 1.7
RUNDC3A-201ENST00000225441 BRCA2P51587 3418 aa25.67■■□□□ 1.7
RUNDC3A-201ENST00000225441 GYG2O15488 501 aa25.67■■□□□ 1.7
RUNDC3A-201ENST00000225441 AVILO75366 819 aa25.67■■□□□ 1.7
RUNDC3A-201ENST00000225441 COL6A1P12109 1028 aa25.67■■□□□ 1.7
RUNDC3A-201ENST00000225441 SELPP16109 830 aa25.67■■□□□ 1.7
RUNDC3A-201ENST00000225441 SERPINB3P29508 390 aa25.67■■□□□ 1.7
RUNDC3A-201ENST00000225441 L1CAMP32004 1257 aa25.67■■□□□ 1.7
RUNDC3A-201ENST00000225441 HDAC4P56524 1084 aa25.67■■□□□ 1.7
RUNDC3A-201ENST00000225441 TAF11Q15544 211 aa25.67■■□□□ 1.7
RUNDC3A-201ENST00000225441 STEAP4Q687X5 459 aa25.67■■□□□ 1.7
RUNDC3A-201ENST00000225441 UNC5AQ6ZN44 842 aa25.67■■□□□ 1.7
RUNDC3A-201ENST00000225441 LRRC8DQ7L1W4 858 aa25.67■■□□□ 1.7
RUNDC3A-201ENST00000225441 NAF1Q96HR8 494 aaKnown RBP25.67■■□□□ 1.7
RUNDC3A-201ENST00000225441 PIWIL1Q96J94 861 aaKnown RBP25.67■■□□□ 1.7
RUNDC3A-201ENST00000225441 WWP1Q9H0M0 922 aa25.67■■□□□ 1.7
RUNDC3A-201ENST00000225441 ARL8BQ9NVJ2 186 aa25.67■■□□□ 1.7
RUNDC3A-201ENST00000225441 NKX1-2Q9UD57 310 aaPredicted RBP25.67■■□□□ 1.7
RUNDC3A-201ENST00000225441 SORCS3Q9UPU3 1222 aa25.67■■□□□ 1.7
RUNDC3A-201ENST00000225441 PAPSS1O43252 624 aaPredicted RBP25.66■■□□□ 1.7
RUNDC3A-201ENST00000225441 NRLP54845 237 aa25.66■■□□□ 1.7
RUNDC3A-201ENST00000225441 KYAT3Q6YP21 454 aaKnown RBP25.66■■□□□ 1.7
RUNDC3A-201ENST00000225441 BEST2Q8NFU1 509 aa25.66■■□□□ 1.7
RUNDC3A-201ENST00000225441 PLAC1Q9HBJ0 212 aa25.66■■□□□ 1.7
RUNDC3A-201ENST00000225441 EIF2B3Q9NR50 452 aaKnown RBP25.66■■□□□ 1.7
RUNDC3A-201ENST00000225441 MGEA5O60502 916 aa25.65■■□□□ 1.7
RUNDC3A-201ENST00000225441 PIAS1O75925 651 aa25.65■■□□□ 1.7
RUNDC3A-201ENST00000225441 MYL2P10916 166 aa25.65■■□□□ 1.7
RUNDC3A-201ENST00000225441 ESRRAP11474 423 aaPredicted RBP25.65■■□□□ 1.7
RUNDC3A-201ENST00000225441 RGS7P49802 495 aa25.65■■□□□ 1.7
RUNDC3A-201ENST00000225441 ZBTB6Q15916 424 aa25.65■■□□□ 1.7
RUNDC3A-201ENST00000225441 TSNAXIP1Q2TAA8 658 aa25.65■■□□□ 1.7
RUNDC3A-201ENST00000225441 XKR4Q5GH76 650 aa25.65■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms