RNA–Protein interactions for RNA: ENST00000221232.9

CNOT3-201, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 2,852 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-201ENST00000221232 UBP1Q9NZI7 540 aa15.07■□□□□ 0
CNOT3-201ENST00000221232 BRCA1P38398 1863 aaKnown RBP15.06■□□□□ 0
CNOT3-201ENST00000221232 CCL15-CCL14A0A0B4J2E2 113 aa15.06■□□□□ 0
CNOT3-201ENST00000221232 DCAF8L1A6NGE4 600 aa15.06■□□□□ 0
CNOT3-201ENST00000221232 MEIS3P2A8K0S8 358 aa15.06■□□□□ 0
CNOT3-201ENST00000221232 GOLGA8TH3BQL2 631 aa15.06■□□□□ 0
CNOT3-201ENST00000221232 TRAFD1O14545 582 aaPredicted RBP15.06■□□□□ 0
CNOT3-201ENST00000221232 TREHO43280 583 aa15.06■□□□□ 0
CNOT3-201ENST00000221232 HUS1O60921 280 aa15.06■□□□□ 0
CNOT3-201ENST00000221232 AMHP03971 560 aa15.06■□□□□ 0
CNOT3-201ENST00000221232 RARBP10826 455 aa15.06■□□□□ 0
CNOT3-201ENST00000221232 EPHX2P34913 555 aa15.06■□□□□ 0
CNOT3-201ENST00000221232 ABL2P42684 1182 aa15.06■□□□□ 0
CNOT3-201ENST00000221232 CCL15Q16663 113 aa15.06■□□□□ 0
CNOT3-201ENST00000221232 TEX9Q8N6V9 391 aa15.06■□□□□ 0
CNOT3-201ENST00000221232 NPLOC4Q8TAT6 608 aa15.06■□□□□ 0
CNOT3-201ENST00000221232 QKIQ96PU8 341 aaKnown RBP eCLIP15.06■□□□□ 0
CNOT3-201ENST00000221232 THTPAQ9BU02 230 aa15.06■□□□□ 0
CNOT3-201ENST00000221232 ZNF180Q9UJW8 692 aa15.06■□□□□ 0
CNOT3-201ENST00000221232 PRR5-ARHGAP8B1AHC4 643 aa15.06■□□□□ 0
CNOT3-201ENST00000221232 WFS1O76024 890 aa15.06■□□□□ 0
CNOT3-201ENST00000221232 TGDSO95455 350 aa15.06■□□□□ 0
CNOT3-201ENST00000221232 STAU1O95793 577 aaKnown RBP15.06■□□□□ 0
CNOT3-201ENST00000221232 BPGMP07738 259 aa15.06■□□□□ 0
CNOT3-201ENST00000221232 PTPN9P43378 593 aa15.06■□□□□ 0
CNOT3-201ENST00000221232 SNX16P57768 344 aa15.06■□□□□ 0
CNOT3-201ENST00000221232 ARHGAP8P85298 464 aa15.06■□□□□ 0
CNOT3-201ENST00000221232 BEX3Q00994 111 aa15.06■□□□□ 0
CNOT3-201ENST00000221232 WSCD1Q658N2 575 aa15.06■□□□□ 0
CNOT3-201ENST00000221232 GPR142Q7Z601 462 aa15.06■□□□□ 0
CNOT3-201ENST00000221232 CMC1Q7Z7K0 106 aa15.06■□□□□ 0
CNOT3-201ENST00000221232 ZNF410Q86VK4 478 aa15.06■□□□□ 0
CNOT3-201ENST00000221232 POU5F2Q8N7G0 328 aa15.06■□□□□ 0
CNOT3-201ENST00000221232 RNF169Q8NCN4 708 aa15.06■□□□□ 0
CNOT3-201ENST00000221232 OR52K1Q8NGK4 314 aa15.06■□□□□ 0
CNOT3-201ENST00000221232 RNF139Q8WU17 664 aa15.06■□□□□ 0
CNOT3-201ENST00000221232 PLEKHA5Q9HAU0 1116 aa15.06■□□□□ 0
CNOT3-201ENST00000221232 XPNPEP3Q9NQH7 507 aa15.06■□□□□ 0
CNOT3-201ENST00000221232 A0A0A0MRY4 1105 aa15.05■□□□□ 0
CNOT3-201ENST00000221232 SDR42E2A6NKP2 422 aa15.05■□□□□ 0
CNOT3-201ENST00000221232 CAPN9O14815 690 aa15.05■□□□□ 0
CNOT3-201ENST00000221232 ALDOAP04075 364 aaKnown RBP15.05■□□□□ 0
CNOT3-201ENST00000221232 SETSIPP0DME0 302 aa15.05■□□□□ 0
CNOT3-201ENST00000221232 SAT1P21673 171 aa15.05■□□□□ 0
CNOT3-201ENST00000221232 MATKP42679 507 aa15.05■□□□□ 0
CNOT3-201ENST00000221232 AFF1P51825 1210 aaKnown RBP15.05■□□□□ 0
CNOT3-201ENST00000221232 DUSP28Q4G0W2 176 aa15.05■□□□□ 0
CNOT3-201ENST00000221232 WASHC2DQ5SRD0 308 aa15.05■□□□□ 0
CNOT3-201ENST00000221232 VWA5B1Q5TIE3 1220 aa15.05■□□□□ 0
CNOT3-201ENST00000221232 NT5DC4Q86YG4 428 aa15.05■□□□□ 0
CNOT3-201ENST00000221232 HOMEZQ8IX15 550 aa15.05■□□□□ 0
CNOT3-201ENST00000221232 TNS4Q8IZW8 715 aa15.05■□□□□ 0
CNOT3-201ENST00000221232 SLC7A14Q8TBB6 771 aa15.05■□□□□ 0
CNOT3-201ENST00000221232 CENPIQ92674 756 aaPredicted RBP15.05■□□□□ 0
CNOT3-201ENST00000221232 MAML3Q96JK9 1138 aa15.05■□□□□ 0
CNOT3-201ENST00000221232 SPATA13Q96N96 652 aa15.05■□□□□ 0
CNOT3-201ENST00000221232 KCNK16Q96T55 309 aa15.05■□□□□ 0
CNOT3-201ENST00000221232 C11orf84Q9BUA3 381 aaPredicted RBP15.05■□□□□ 0
CNOT3-201ENST00000221232 LRRC4Q9HBW1 653 aa15.05■□□□□ 0
CNOT3-201ENST00000221232 FZD10Q9ULW2 581 aa15.05■□□□□ 0
CNOT3-201ENST00000221232 UBQLN1Q9UMX0 589 aaKnown RBP15.05■□□□□ 0
CNOT3-201ENST00000221232 SUFUQ9UMX1 484 aa15.05■□□□□ 0
CNOT3-201ENST00000221232 DNAJC16Q9Y2G8 782 aa15.05■□□□□ 0
CNOT3-201ENST00000221232 DARSP14868 501 aaKnown RBP15.05■□□□□ -0
CNOT3-201ENST00000221232 ZFXP17010 805 aaPredicted RBP15.05■□□□□ -0
CNOT3-201ENST00000221232 TPH1P17752 444 aa15.05■□□□□ -0
CNOT3-201ENST00000221232 MAGEA3P43357 314 aa15.05■□□□□ -0
CNOT3-201ENST00000221232 SARNPP82979 210 aaKnown RBP15.05■□□□□ -0
CNOT3-201ENST00000221232 OCRLQ01968 901 aa15.05■□□□□ -0
CNOT3-201ENST00000221232 PDE1CQ14123 709 aaPredicted RBP15.05■□□□□ -0
CNOT3-201ENST00000221232 MUM1Q2TAK8 710 aa15.05■□□□□ -0
CNOT3-201ENST00000221232 ARHGAP17Q68EM7 881 aa15.05■□□□□ -0
CNOT3-201ENST00000221232 UNC93AQ86WB7 457 aa15.05■□□□□ -0
CNOT3-201ENST00000221232 ZNF567Q8N184 647 aa15.05■□□□□ -0
CNOT3-201ENST00000221232 LRRC52Q8N7C0 313 aa15.05■□□□□ -0
CNOT3-201ENST00000221232 B3GALNT2Q8NCR0 500 aa15.05■□□□□ -0
CNOT3-201ENST00000221232 RBM15BQ8NDT2 890 aaKnown RBP15.05■□□□□ -0
CNOT3-201ENST00000221232 ANLNQ9NQW6 1124 aa15.05■□□□□ -0
CNOT3-201ENST00000221232 PNPOQ9NVS9 261 aa15.05■□□□□ -0
CNOT3-201ENST00000221232 MOCS1Q9NZB8 636 aa15.05■□□□□ -0
CNOT3-201ENST00000221232 SIRPGQ9P1W8 387 aa15.05■□□□□ -0
CNOT3-201ENST00000221232 PIRO00625 290 aa15.04■□□□□ -0
CNOT3-201ENST00000221232 NRP1O14786 923 aa15.04■□□□□ -0
CNOT3-201ENST00000221232 ATP9BO43861 1147 aa15.04■□□□□ -0
CNOT3-201ENST00000221232 DGKIO75912 1065 aa15.04■□□□□ -0
CNOT3-201ENST00000221232 CRHR1P34998 444 aa15.04■□□□□ -0
CNOT3-201ENST00000221232 NR2C2P49116 596 aa15.04■□□□□ -0
CNOT3-201ENST00000221232 DEUP1Q05D60 604 aa15.04■□□□□ -0
CNOT3-201ENST00000221232 SEMA5AQ13591 1074 aa15.04■□□□□ -0
CNOT3-201ENST00000221232 PACS1Q6VY07 963 aa15.04■□□□□ -0
CNOT3-201ENST00000221232 ATG14Q6ZNE5 492 aa15.04■□□□□ -0
CNOT3-201ENST00000221232 EFCAB3Q8N7B9 438 aa15.04■□□□□ -0
CNOT3-201ENST00000221232 ARNTL2Q8WYA1 636 aa15.04■□□□□ -0
CNOT3-201ENST00000221232 EDEM1Q92611 657 aa15.04■□□□□ -0
CNOT3-201ENST00000221232 PPP1R36Q96LQ0 422 aa15.04■□□□□ -0
CNOT3-201ENST00000221232 TINF2Q9BSI4 451 aa15.04■□□□□ -0
CNOT3-201ENST00000221232 FRMD8Q9BZ67 464 aaPredicted RBP15.04■□□□□ -0
CNOT3-201ENST00000221232 XAB2Q9HCS7 855 aaKnown RBP15.04■□□□□ -0
CNOT3-201ENST00000221232 PIGVQ9NUD9 493 aa15.04■□□□□ -0
CNOT3-201ENST00000221232 KLHL8Q9P2G9 620 aaPredicted RBP15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms