RNA–Protein interactions for RNA: ENST00000215956.9

SNU13-201, Transcript of small nuclear ribonucleoprotein 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNU13, Length 1,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-201ENST00000215956 HCFC1R1Q9NWW0 138 aa12.71□□□□□ -0.37
SNU13-201ENST00000215956 RRN3Q9NYV6 651 aa12.71□□□□□ -0.37
SNU13-201ENST00000215956 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.71□□□□□ -0.37
SNU13-201ENST00000215956 TJP2Q9UDY2 1190 aa12.71□□□□□ -0.37
SNU13-201ENST00000215956 COL4A2P08572 1712 aa12.71□□□□□ -0.38
SNU13-201ENST00000215956 BAHCC1Q9P281 2608 aa12.71□□□□□ -0.38
SNU13-201ENST00000215956 TRIP11Q15643 1979 aa12.7□□□□□ -0.38
SNU13-201ENST00000215956 MAP2K7O14733 419 aa12.7□□□□□ -0.38
SNU13-201ENST00000215956 TTI1O43156 1089 aa12.7□□□□□ -0.38
SNU13-201ENST00000215956 ADAM12O43184 909 aa12.7□□□□□ -0.38
SNU13-201ENST00000215956 ECI2O75521 394 aa12.7□□□□□ -0.38
SNU13-201ENST00000215956 DAB1O75553 588 aa12.7□□□□□ -0.38
SNU13-201ENST00000215956 AP1G2O75843 785 aa12.7□□□□□ -0.38
SNU13-201ENST00000215956 SEC31AO94979 1220 aaKnown RBP12.7□□□□□ -0.38
SNU13-201ENST00000215956 TRUB2O95900 331 aaKnown RBP12.7□□□□□ -0.38
SNU13-201ENST00000215956 TDGF1P13385 188 aa12.7□□□□□ -0.38
SNU13-201ENST00000215956 LCP1P13796 627 aa12.7□□□□□ -0.38
SNU13-201ENST00000215956 ACAT1P24752 427 aaKnown RBP12.7□□□□□ -0.38
SNU13-201ENST00000215956 MIPP30301 263 aa12.7□□□□□ -0.38
SNU13-201ENST00000215956 RDXP35241 583 aaKnown RBP12.7□□□□□ -0.38
SNU13-201ENST00000215956 KLF1Q13351 362 aaPredicted RBP12.7□□□□□ -0.38
SNU13-201ENST00000215956 FZD5Q13467 585 aa12.7□□□□□ -0.38
SNU13-201ENST00000215956 CASP8Q14790 479 aa12.7□□□□□ -0.38
SNU13-201ENST00000215956 LPAL2Q16609 132 aa12.7□□□□□ -0.38
SNU13-201ENST00000215956 AADACL2Q6P093 401 aa12.7□□□□□ -0.38
SNU13-201ENST00000215956 FAM171BQ6P995 826 aa12.7□□□□□ -0.38
SNU13-201ENST00000215956 DRICH1Q6PGQ1 229 aaPredicted RBP12.7□□□□□ -0.38
SNU13-201ENST00000215956 STRADAQ7RTN6 431 aa12.7□□□□□ -0.38
SNU13-201ENST00000215956 CPNE8Q86YQ8 564 aa12.7□□□□□ -0.38
SNU13-201ENST00000215956 SCML4Q8N228 414 aa12.7□□□□□ -0.38
SNU13-201ENST00000215956 EMC1Q8N766 993 aa12.7□□□□□ -0.38
SNU13-201ENST00000215956 KCTD6Q8NC69 237 aa12.7□□□□□ -0.38
SNU13-201ENST00000215956 C3orf58Q8NDZ4 430 aa12.7□□□□□ -0.38
SNU13-201ENST00000215956 IFT81Q8WYA0 676 aa12.7□□□□□ -0.38
SNU13-201ENST00000215956 RNF25Q96BH1 459 aaPredicted RBP12.7□□□□□ -0.38
SNU13-201ENST00000215956 MAK16Q9BXY0 300 aaKnown RBP12.7□□□□□ -0.38
SNU13-201ENST00000215956 DCLK3Q9C098 648 aa12.7□□□□□ -0.38
SNU13-201ENST00000215956 PRDM16Q9HAZ2 1276 aa12.7□□□□□ -0.38
SNU13-201ENST00000215956 CRTAC1Q9NQ79 661 aa12.7□□□□□ -0.38
SNU13-201ENST00000215956 CNGB3Q9NQW8 809 aa12.7□□□□□ -0.38
SNU13-201ENST00000215956 KRT82Q9NSB4 513 aa12.7□□□□□ -0.38
SNU13-201ENST00000215956 ZNF446Q9NWS9 450 aa12.7□□□□□ -0.38
SNU13-201ENST00000215956 DNMT3BQ9UBC3 853 aaKnown RBP12.7□□□□□ -0.38
SNU13-201ENST00000215956 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.7□□□□□ -0.38
SNU13-201ENST00000215956 FAM208BQ5VWN6 2430 aa12.7□□□□□ -0.38
SNU13-201ENST00000215956 SCN1AP35498 2009 aa12.7□□□□□ -0.38
SNU13-201ENST00000215956 FRYQ5TBA9 3013 aa12.7□□□□□ -0.38
SNU13-201ENST00000215956 hCG_1818297A0A087WSY0 165 aa12.7□□□□□ -0.38
SNU13-201ENST00000215956 SHISA7A6NL88 538 aa12.7□□□□□ -0.38
SNU13-201ENST00000215956 ZNF487B1APH4 448 aa12.7□□□□□ -0.38
SNU13-201ENST00000215956 BHMG1C9JSJ3 638 aaPredicted RBP12.7□□□□□ -0.38
SNU13-201ENST00000215956 SLC30A4O14863 429 aa12.7□□□□□ -0.38
SNU13-201ENST00000215956 KDELR1P24390 212 aa12.7□□□□□ -0.38
SNU13-201ENST00000215956 TKTP29401 623 aaKnown RBP12.7□□□□□ -0.38
SNU13-201ENST00000215956 NRLP54845 237 aa12.7□□□□□ -0.38
SNU13-201ENST00000215956 TFDP2Q14188 446 aa12.7□□□□□ -0.38
SNU13-201ENST00000215956 PPP1R7Q15435 360 aa12.7□□□□□ -0.38
SNU13-201ENST00000215956 SIX1Q15475 284 aaPredicted RBP12.7□□□□□ -0.38
SNU13-201ENST00000215956 LAIR1Q6GTX8 287 aa12.7□□□□□ -0.38
SNU13-201ENST00000215956 CLEC20AQ6ZU45 233 aa12.7□□□□□ -0.38
SNU13-201ENST00000215956 CEP128Q6ZU80 1094 aa12.7□□□□□ -0.38
SNU13-201ENST00000215956 GOLGA6L1Q8N7Z2 621 aa12.7□□□□□ -0.38
SNU13-201ENST00000215956 CASKIN2Q8WXE0 1202 aa12.7□□□□□ -0.38
SNU13-201ENST00000215956 IRGQQ8WZA9 623 aa12.7□□□□□ -0.38
SNU13-201ENST00000215956 PCED1BQ96HM7 432 aa12.7□□□□□ -0.38
SNU13-201ENST00000215956 B3GNT5Q9BYG0 378 aa12.7□□□□□ -0.38
SNU13-201ENST00000215956 PLA2G2FQ9BZM2 168 aa12.7□□□□□ -0.38
SNU13-201ENST00000215956 TSPYL1Q9H0U9 437 aa12.7□□□□□ -0.38
SNU13-201ENST00000215956 CHRDQ9H2X0 955 aa12.7□□□□□ -0.38
SNU13-201ENST00000215956 ZWILCHQ9H900 591 aa12.7□□□□□ -0.38
SNU13-201ENST00000215956 DMAP1Q9NPF5 467 aaPredicted RBP12.7□□□□□ -0.38
SNU13-201ENST00000215956 MTRF1LQ9UGC7 380 aaKnown RBP12.7□□□□□ -0.38
SNU13-201ENST00000215956 MRPS23Q9Y3D9 190 aaKnown RBP12.7□□□□□ -0.38
SNU13-201ENST00000215956 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.69□□□□□ -0.38
SNU13-201ENST00000215956 MDM4O15151 490 aa12.69□□□□□ -0.38
SNU13-201ENST00000215956 LRP3O75074 770 aa12.69□□□□□ -0.38
SNU13-201ENST00000215956 FLT3P36888 993 aa12.69□□□□□ -0.38
SNU13-201ENST00000215956 MATKP42679 507 aa12.69□□□□□ -0.38
SNU13-201ENST00000215956 PTGIRP43119 386 aa12.69□□□□□ -0.38
SNU13-201ENST00000215956 BRCC3P46736 316 aa12.69□□□□□ -0.38
SNU13-201ENST00000215956 CAV1Q03135 178 aa12.69□□□□□ -0.38
SNU13-201ENST00000215956 ADIGQ0VDE8 80 aa12.69□□□□□ -0.38
SNU13-201ENST00000215956 SMARCB1Q12824 385 aa12.69□□□□□ -0.38
SNU13-201ENST00000215956 CALCOCO2Q13137 446 aa12.69□□□□□ -0.38
SNU13-201ENST00000215956 KRT81Q14533 505 aa12.69□□□□□ -0.38
SNU13-201ENST00000215956 PPP2R5DQ14738 602 aa12.69□□□□□ -0.38
SNU13-201ENST00000215956 NFE2Q16621 373 aaPredicted RBP12.69□□□□□ -0.38
SNU13-201ENST00000215956 CCDC14Q49A88 953 aa12.69□□□□□ -0.38
SNU13-201ENST00000215956 HSP90B2PQ58FF3 399 aa12.69□□□□□ -0.38
SNU13-201ENST00000215956 DUPD1Q68J44 220 aa12.69□□□□□ -0.38
SNU13-201ENST00000215956 SND1Q7KZF4 910 aaKnown RBP eCLIP12.69□□□□□ -0.38
SNU13-201ENST00000215956 SPATA2LQ8IUW3 424 aaPredicted RBP12.69□□□□□ -0.38
SNU13-201ENST00000215956 PSTKQ8IV42 348 aaKnown RBP12.69□□□□□ -0.38
SNU13-201ENST00000215956 SCUBE3Q8IX30 993 aa12.69□□□□□ -0.38
SNU13-201ENST00000215956 MREGQ8N565 214 aa12.69□□□□□ -0.38
SNU13-201ENST00000215956 CELF5Q8N6W0 485 aaKnown RBP12.69□□□□□ -0.38
SNU13-201ENST00000215956 CCDC89Q8N998 374 aa12.69□□□□□ -0.38
SNU13-201ENST00000215956 DNASE1L2Q92874 299 aa12.69□□□□□ -0.38
SNU13-201ENST00000215956 MYLPFQ96A32 169 aa12.69□□□□□ -0.38
SNU13-201ENST00000215956 CSNK1G1Q9HCP0 422 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms