RNA–Protein interactions for RNA: ENSMUST00000108531.7

Nup88-203, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-203ENSMUST00000108531 Slc4a11A2AJN7 862 aa13.27□□□□□ -0.29
Nup88-203ENSMUST00000108531 C87414E9PWI7 475 aa13.27□□□□□ -0.29
Nup88-203ENSMUST00000108531 Mtco1P00397 514 aa13.27□□□□□ -0.29
Nup88-203ENSMUST00000108531 Fen1P39749 378 aa13.27□□□□□ -0.29
Nup88-203ENSMUST00000108531 Oaz1P54369 227 aa13.27□□□□□ -0.29
Nup88-203ENSMUST00000108531 Smad1P70340 465 aa13.27□□□□□ -0.29
Nup88-203ENSMUST00000108531 Prdx5P99029 210 aa13.27□□□□□ -0.29
Nup88-203ENSMUST00000108531 Dact3Q0PHV7 610 aa13.27□□□□□ -0.29
Nup88-203ENSMUST00000108531 PigaQ64323 485 aa13.27□□□□□ -0.29
Nup88-203ENSMUST00000108531 RetsatQ64FW2 609 aa13.27□□□□□ -0.29
Nup88-203ENSMUST00000108531 Arhgap10Q6Y5D8 786 aa13.27□□□□□ -0.29
Nup88-203ENSMUST00000108531 Tspan18Q80WR1 248 aa13.27□□□□□ -0.29
Nup88-203ENSMUST00000108531 Gtf3c4Q8BMQ2 817 aaKnown RBP13.27□□□□□ -0.29
Nup88-203ENSMUST00000108531 Coq6Q8R1S0 476 aa13.27□□□□□ -0.29
Nup88-203ENSMUST00000108531 Olfr393Q8VGR6 312 aa13.27□□□□□ -0.29
Nup88-203ENSMUST00000108531 Pex6Q99LC9 981 aa13.27□□□□□ -0.29
Nup88-203ENSMUST00000108531 Chst12Q99LL3 419 aa13.27□□□□□ -0.29
Nup88-203ENSMUST00000108531 Dach1Q9QYB2 751 aa13.27□□□□□ -0.29
Nup88-203ENSMUST00000108531 Zmynd8A2A484 1235 aaKnown RBP13.27□□□□□ -0.29
Nup88-203ENSMUST00000108531 Arhgef26D3YYY8 869 aa13.27□□□□□ -0.29
Nup88-203ENSMUST00000108531 NoctO35710 429 aa13.27□□□□□ -0.29
Nup88-203ENSMUST00000108531 P01650 108 aa13.27□□□□□ -0.29
Nup88-203ENSMUST00000108531 P01653 108 aa13.27□□□□□ -0.29
Nup88-203ENSMUST00000108531 Ccnd1P25322 295 aa13.27□□□□□ -0.29
Nup88-203ENSMUST00000108531 LdlrP35951 862 aa13.27□□□□□ -0.29
Nup88-203ENSMUST00000108531 Tac1P41539 130 aa13.27□□□□□ -0.29
Nup88-203ENSMUST00000108531 Rpl5P47962 297 aaKnown RBP13.27□□□□□ -0.29
Nup88-203ENSMUST00000108531 Kcnj6P48542 425 aa13.27□□□□□ -0.29
Nup88-203ENSMUST00000108531 Hmgcs2P54869 508 aa13.27□□□□□ -0.29
Nup88-203ENSMUST00000108531 Emilin3P59900 758 aa13.27□□□□□ -0.29
Nup88-203ENSMUST00000108531 Arl4aP61213 200 aa13.27□□□□□ -0.29
Nup88-203ENSMUST00000108531 Abce1P61222 599 aaKnown RBP13.27□□□□□ -0.29
Nup88-203ENSMUST00000108531 Olfm3P63056 478 aa13.27□□□□□ -0.29
Nup88-203ENSMUST00000108531 Psmb4P99026 264 aa13.27□□□□□ -0.29
Nup88-203ENSMUST00000108531 Pou2f2Q00196 463 aa13.27□□□□□ -0.29
Nup88-203ENSMUST00000108531 Ikzf1Q03267 517 aa13.27□□□□□ -0.29
Nup88-203ENSMUST00000108531 RnaselQ05921 735 aa13.27□□□□□ -0.29
Nup88-203ENSMUST00000108531 Lrrc74bQ14BP6 391 aa13.27□□□□□ -0.29
Nup88-203ENSMUST00000108531 Prl3a1Q78Y73 227 aa13.27□□□□□ -0.29
Nup88-203ENSMUST00000108531 Fbxw21Q8BI38 468 aa13.27□□□□□ -0.29
Nup88-203ENSMUST00000108531 Gstm4Q8R5I6 218 aa13.27□□□□□ -0.29
Nup88-203ENSMUST00000108531 Mgrn1Q9D074 532 aa13.27□□□□□ -0.29
Nup88-203ENSMUST00000108531 Q9D1Z2 194 aa13.27□□□□□ -0.29
Nup88-203ENSMUST00000108531 Ngly1Q9JI78 651 aa13.27□□□□□ -0.29
Nup88-203ENSMUST00000108531 PollQ9QXE2 573 aaKnown RBP13.27□□□□□ -0.29
Nup88-203ENSMUST00000108531 Smim10l2aA0A0B4J1F8 78 aa13.26□□□□□ -0.29
Nup88-203ENSMUST00000108531 Map7d3A2AEY4 876 aa13.26□□□□□ -0.29
Nup88-203ENSMUST00000108531 Fibcd1A2AV25 459 aa13.26□□□□□ -0.29
Nup88-203ENSMUST00000108531 Vmn1r39G3UWE6 305 aa13.26□□□□□ -0.29
Nup88-203ENSMUST00000108531 Ebf3O08791 596 aa13.26□□□□□ -0.29
Nup88-203ENSMUST00000108531 Klc2O88448 599 aa13.26□□□□□ -0.29
Nup88-203ENSMUST00000108531 Pim1P06803 397 aa13.26□□□□□ -0.29
Nup88-203ENSMUST00000108531 FlgP11088 336 aa13.26□□□□□ -0.29
Nup88-203ENSMUST00000108531 Prim2P33610 505 aa13.26□□□□□ -0.29
Nup88-203ENSMUST00000108531 TktP40142 623 aaKnown RBP13.26□□□□□ -0.29
Nup88-203ENSMUST00000108531 Hexim2Q3TVI4 313 aa13.26□□□□□ -0.29
Nup88-203ENSMUST00000108531 Scube3Q66PY1 993 aa13.26□□□□□ -0.29
Nup88-203ENSMUST00000108531 Nomo1Q6GQT9 1214 aaKnown RBP13.26□□□□□ -0.29
Nup88-203ENSMUST00000108531 Rxfp1Q6R6I7 758 aa13.26□□□□□ -0.29
Nup88-203ENSMUST00000108531 Olfr1057Q7TR75 315 aa13.26□□□□□ -0.29
Nup88-203ENSMUST00000108531 Clec4b1Q7TS58 209 aa13.26□□□□□ -0.29
Nup88-203ENSMUST00000108531 Trnp1Q80ZI1 223 aa13.26□□□□□ -0.29
Nup88-203ENSMUST00000108531 Nat14Q8BVG8 206 aa13.26□□□□□ -0.29
Nup88-203ENSMUST00000108531 Rbbp5Q8BX09 538 aaKnown RBP13.26□□□□□ -0.29
Nup88-203ENSMUST00000108531 Afap1l1Q8BZI0 768 aa13.26□□□□□ -0.29
Nup88-203ENSMUST00000108531 Brat1Q8C3R1 822 aa13.26□□□□□ -0.29
Nup88-203ENSMUST00000108531 Slco4a1Q8K078 723 aa13.26□□□□□ -0.29
Nup88-203ENSMUST00000108531 Vmn1r199Q8R280 367 aa13.26□□□□□ -0.29
Nup88-203ENSMUST00000108531 Snx15Q91WE1 337 aa13.26□□□□□ -0.29
Nup88-203ENSMUST00000108531 Hdhd5Q91WM2 419 aa13.26□□□□□ -0.29
Nup88-203ENSMUST00000108531 Def8Q99J78 448 aa13.26□□□□□ -0.29
Nup88-203ENSMUST00000108531 Efhc1Q9D9T8 648 aa13.26□□□□□ -0.29
Nup88-203ENSMUST00000108531 RalbQ9JIW9 206 aa13.26□□□□□ -0.29
Nup88-203ENSMUST00000108531 PapolbQ9WVP6 641 aa13.26□□□□□ -0.29
Nup88-203ENSMUST00000108531 Sf3b1Q99NB9 1304 aaKnown RBP13.26□□□□□ -0.29
Nup88-203ENSMUST00000108531 Taf4E9QAP7 1042 aaKnown RBP13.25□□□□□ -0.29
Nup88-203ENSMUST00000108531 Gm7694J3QNH8 270 aa13.25□□□□□ -0.29
Nup88-203ENSMUST00000108531 Syngr1O55100 234 aa13.25□□□□□ -0.29
Nup88-203ENSMUST00000108531 IkbkgO88522 412 aa13.25□□□□□ -0.29
Nup88-203ENSMUST00000108531 ChgbP16014 677 aa13.25□□□□□ -0.29
Nup88-203ENSMUST00000108531 Caprin2Q05A80 1031 aaKnown RBP13.25□□□□□ -0.29
Nup88-203ENSMUST00000108531 Krt26Q3TRJ4 462 aa13.25□□□□□ -0.29
Nup88-203ENSMUST00000108531 AcdQ5EE38 416 aa13.25□□□□□ -0.29
Nup88-203ENSMUST00000108531 Slc17a6Q8BLE7 582 aa13.25□□□□□ -0.29
Nup88-203ENSMUST00000108531 Mul1Q8VCM5 352 aa13.25□□□□□ -0.29
Nup88-203ENSMUST00000108531 IrgqQ8VIM9 583 aa13.25□□□□□ -0.29
Nup88-203ENSMUST00000108531 Rnh1Q91VI7 456 aa13.25□□□□□ -0.29
Nup88-203ENSMUST00000108531 Me2Q99KE1 589 aa13.25□□□□□ -0.29
Nup88-203ENSMUST00000108531 Tbc1d15Q9CXF4 671 aa13.25□□□□□ -0.29
Nup88-203ENSMUST00000108531 Ube4bQ9ES00 1173 aa13.25□□□□□ -0.29
Nup88-203ENSMUST00000108531 Itgb3O54890 787 aa13.25□□□□□ -0.29
Nup88-203ENSMUST00000108531 LeprP48356 1162 aa13.25□□□□□ -0.29
Nup88-203ENSMUST00000108531 Atp6v0d1P51863 351 aa13.25□□□□□ -0.29
Nup88-203ENSMUST00000108531 Ccna2P51943 422 aaKnown RBP13.25□□□□□ -0.29
Nup88-203ENSMUST00000108531 Slc12a1P55014 1095 aa13.25□□□□□ -0.29
Nup88-203ENSMUST00000108531 Il1rapl1P59823 695 aa13.25□□□□□ -0.29
Nup88-203ENSMUST00000108531 IhhP97812 411 aa13.25□□□□□ -0.29
Nup88-203ENSMUST00000108531 Stt3bQ3TDQ1 823 aa13.25□□□□□ -0.29
Nup88-203ENSMUST00000108531 Fbxo39Q5NBU5 443 aa13.25□□□□□ -0.29
Nup88-203ENSMUST00000108531 EfsQ64355 560 aa13.25□□□□□ -0.29
Retrieved 100 of 22,080 RNA–protein pairs in 27 ms