RNA–Protein interactions for RNA: ENSMUST00000092215.5

Ccdc38-201, Transcript of Coiled-coil domain-containing protein 38, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc38, Length 3,656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38-201ENSMUST00000092215 Tspyl3Q3UYP3 334 aa10.26□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Bdkrb1Q61125 334 aa10.26□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Krt12Q64291 487 aa10.26□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 PtprcapQ64697 197 aa10.26□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Q6PAC4 1279 aa10.26□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Znf821Q6PD05 413 aa10.26□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Znf365Q8BG89 408 aa10.26□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Wdr59Q8C0M0 992 aa10.26□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Nlrp4bQ8C6J9 863 aa10.26□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Epc1Q8C9X6 813 aa10.26□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Fbxo21Q8VDH1 627 aa10.26□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Snx24Q9CRB0 169 aa10.26□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Ola1Q9CZ30 396 aaKnown RBP10.26□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Pramef12Q9D2F1 463 aa10.26□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 ParvbQ9ES46 365 aa10.26□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Tmem59Q9QY73 323 aa10.26□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Pla2g2fQ9QZT4 168 aa10.26□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Zfp236S4R299 1847 aa10.26□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 4930558K02RikE0CXC6 182 aa10.26□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Coro1aO89053 461 aa10.26□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Il2P04351 169 aa10.26□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Ccnb1P24860 430 aa10.26□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 AmhP27106 555 aa10.26□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Mrgprx2Q3UG50 352 aa10.26□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Fcrl5Q68SN8 596 aa10.26□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 GmipQ6PGG2 971 aa10.26□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Shc2Q8BMC3 573 aa10.26□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Lancl3Q8CD19 420 aa10.26□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Sik2Q8CFH6 931 aa10.26□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Rasgef1cQ9D300 466 aa10.26□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Bpifb9bA2AJD1 591 aa10.25□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Ralgps1A2AR50 585 aa10.25□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 4930444G20RikD3Z741 495 aa10.25□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Gja1P23242 382 aa10.25□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 ZfaP23607 742 aa10.25□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Sycp3P70281 254 aa10.25□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 AxlQ00993 888 aa10.25□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Ccndbp1Q3TVC7 356 aa10.25□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Elf3Q3UPW2 391 aa10.25□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Hepacam2Q4VAH7 463 aa10.25□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Adat2Q6P6J0 191 aa10.25□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Bpifb9aQ80XI7 591 aa10.25□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Fsd1lQ8BYN5 507 aa10.25□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Spdye4bQ8CDE8 236 aa10.25□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Q8CEZ4 452 aa10.25□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Ces2aQ8QZR3 558 aa10.25□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Mtss1Q8R1S4 759 aa10.25□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Thg1lQ9CY52 298 aa10.25□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Cyp2c55Q9D816 490 aa10.25□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Nfu1Q9QZ23 255 aa10.25□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Atp11cQ9QZW0 1129 aa10.25□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Gm7173A0A0G2JEB6 3132 aa10.25□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Igkv5-43A0A0B4J1J2 115 aa10.25□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Rpl9-ps6A0A140T8T4 192 aa10.25□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Klhdc7bA0A286YD60 1263 aa10.25□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Bclaf3A2AG58 752 aaKnown RBP10.25□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Maml3D4QGC2 1135 aa10.25□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Adgrf2E9Q4J9 644 aa10.25□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Vmn2r11E9Q4X4 861 aa10.25□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 ShdO88834 343 aa10.25□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Ptpn22P29352 802 aa10.25□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Tead2P48301 445 aa10.25□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Rpl9P51410 192 aaKnown RBP10.25□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Adcy8P97490 1249 aa10.25□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 HelqQ2VPA6 1069 aa10.25□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Pwwp2aQ69Z61 730 aa10.25□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Ggnbp1Q6K1E7 370 aa10.25□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 OcrlQ6NVF0 900 aa10.25□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Znf532Q6NXK2 1036 aa10.25□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Otop2Q80SX5 563 aa10.25□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Robo4Q8C310 1012 aa10.25□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Ccdc73Q8CDM4 1066 aa10.25□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Vmn1r188Q8K3N2 308 aa10.25□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Lgi2Q8K4Z0 550 aa10.25□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 AjubaQ91XC0 547 aa10.25□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Atpaf2Q91YY4 289 aa10.25□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Eps8l2Q99K30 729 aa10.25□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Pex6Q99LC9 981 aa10.25□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Tsnaxip1Q99P25 704 aa10.25□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Olfr703Q9EPF5 319 aa10.25□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 IdsQ08890 552 aa10.25□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Tfdp2Q64163 446 aa10.25□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Cyp3a13Q64464 503 aa10.25□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Fbxo38Q8BMI0 1194 aa10.25□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Bpifb6Q8BU51 449 aa10.25□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Dus1lQ8C2P3 475 aa10.25□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Sit1Q8C503 180 aa10.25□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Prc1Q99K43 603 aaKnown RBP10.25□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Cpxm2Q9D2L5 764 aa10.25□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Htra2Q9JIY5 458 aa10.25□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 AuhQ9JLZ3 314 aa10.25□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Elf4Q9Z2U4 655 aa10.25□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Zbtb11G5E8B9 1050 aaKnown RBP10.24□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Usp35M0QWN7 1009 aa10.24□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Gm5571P01639 130 aa10.24□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Cd247P24161 164 aa10.24□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Gpr3P35413 330 aa10.24□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Rps24P62849 133 aaKnown RBP10.24□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Uba1Q02053 1058 aaKnown RBP10.24□□□□□ -0.77
Ccdc38-201ENSMUST00000092215 Pld5Q3UNN8 536 aa10.24□□□□□ -0.77
Retrieved 100 of 22,080 RNA–protein pairs in 21.9 ms