RNA–Protein interactions for RNA: ENSMUST00000088349.2

Col9a1-202, Transcript of Collagen alpha-1(IX) chain, mousemouse

TSL 1 (best) BASIC

Gene Col9a1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-202ENSMUST00000088349 En2P09066 324 aa11.88□□□□□ -0.51
Col9a1-202ENSMUST00000088349 PcnaP17918 261 aa11.88□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Rps6ka3P18654 740 aaKnown RBP11.88□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Tsta3P23591 321 aa11.88□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Crhr1P35347 415 aa11.88□□□□□ -0.51
Col9a1-202ENSMUST00000088349 ClgnP52194 611 aa11.88□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Traf3Q60803 567 aa11.88□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Catsper3Q80W99 395 aa11.88□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Arhgap15Q811M1 481 aa11.88□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Clasp2Q8BRT1 1286 aaKnown RBP11.88□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Mark4Q8CIP4 752 aa11.88□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Nup85Q8R480 656 aaKnown RBP11.88□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Sgsm3Q8VCZ6 750 aa11.88□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Ddx1Q91VR5 740 aaKnown RBP11.88□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Ophn1Q99J31 802 aa11.88□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Ggt7Q99JP7 662 aa11.88□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Arpc2Q9CVB6 300 aa11.88□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Utp11Q9CZJ1 253 aaKnown RBP11.88□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Plin3Q9DBG5 437 aa11.88□□□□□ -0.51
Col9a1-202ENSMUST00000088349 RalbQ9JIW9 206 aa11.88□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Plagl1Q9JLQ4 704 aa11.88□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Kcnq2Q9Z351 759 aa11.88□□□□□ -0.51
Col9a1-202ENSMUST00000088349 D830030K20RikE9PYQ5 218 aa11.88□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Gm3043K7N693 218 aa11.88□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Gm16440K7N6G6 218 aa11.88□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Gm2244L7N2A3 218 aa11.88□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Gm3278L7N2D2 218 aa11.88□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Gm8271L7N2E2 218 aa11.88□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Rps12P63323 132 aaKnown RBP11.88□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Fam83hQ148V8 1209 aa11.88□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Trim71Q1PSW8 855 aaKnown RBP11.88□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Papss1Q60967 624 aa11.88□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Bcar1Q61140 874 aa11.88□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Pde1aQ61481 565 aa11.88□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Scube3Q66PY1 993 aa11.88□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Fndc3bQ6NWW9 1207 aaKnown RBP11.88□□□□□ -0.51
Col9a1-202ENSMUST00000088349 IqceQ6PCQ0 778 aa11.88□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Got1l1Q7TSV6 404 aa11.88□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Cwf19l2Q8BG79 887 aaKnown RBP11.88□□□□□ -0.51
Col9a1-202ENSMUST00000088349 SybuQ8BHS8 665 aa11.88□□□□□ -0.51
Col9a1-202ENSMUST00000088349 SowahaQ8BLS7 548 aa11.88□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Aph1bQ8C7N7 257 aa11.88□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Nudt13Q8JZU0 352 aa11.88□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Pcdhb18Q91Y02 792 aa11.88□□□□□ -0.51
Col9a1-202ENSMUST00000088349 CygbQ9CX80 190 aa11.88□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Ccdc130Q9D516 385 aa11.88□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Actrt2Q9D9L5 377 aa11.88□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Cab39lQ9DB16 337 aa11.88□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Mettl7bQ9DD20 244 aa11.88□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Tubb3Q9ERD7 450 aa11.88□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Ndufa13Q9ERS2 144 aa11.88□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Ing2Q9ESK4 281 aa11.88□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Neu2Q9JMH3 379 aa11.88□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Acox2Q9QXD1 681 aa11.88□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Angptl2Q9R045 493 aa11.88□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Rbck1Q9WUB0 508 aa11.88□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Fibcd1A2AV25 459 aa11.88□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Gm3264L7N2C5 238 aa11.88□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Krt10P02535 570 aa11.88□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Grm1P97772 1199 aa11.88□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Mcm9Q2KHI9 1134 aa11.88□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Fam198aQ3UY90 562 aa11.88□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Otol1Q4ZJM7 482 aa11.88□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Exoc3l4Q6DIA2 721 aa11.88□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Baiap2l2Q80Y61 522 aa11.88□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Ppm1lQ8BHN0 360 aa11.88□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Klhl2Q8JZP3 593 aa11.88□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Upb1Q8VC97 393 aa11.88□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Slc25a3Q8VEM8 357 aaKnown RBP11.88□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Socs4Q91ZA6 436 aa11.88□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Xpo5Q924C1 1204 aaKnown RBP11.88□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Stk33Q924X7 491 aa11.88□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Micu3Q9CTY5 523 aa11.88□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Thg1lQ9CY52 298 aa11.88□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Atp11cQ9QZW0 1129 aa11.88□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Zfc3h1B2RT41 1992 aaKnown RBP11.87□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Ttc30a2A2AKQ8 664 aa11.87□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Pknox1O70477 436 aa11.87□□□□□ -0.51
Col9a1-202ENSMUST00000088349 NxnP97346 435 aa11.87□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Arl14Q3SXC5 192 aa11.87□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Pyroxd1Q3TMV7 498 aa11.87□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Nlrc4Q3UP24 1024 aa11.87□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Trim38Q5SZ99 471 aa11.87□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Kcna4Q61423 654 aa11.87□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Ndrg1Q62433 394 aa11.87□□□□□ -0.51
Col9a1-202ENSMUST00000088349 PigaQ64323 485 aa11.87□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Olfr23Q7TRX4 325 aa11.87□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Plin5Q8BVZ1 463 aa11.87□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Galnt5Q8C102 930 aa11.87□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Slco4a1Q8K078 723 aa11.87□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Dedd2Q8QZV0 330 aa11.87□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Fam192aQ91WE2 254 aa11.87□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Lypd3Q91YK8 363 aa11.87□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Homer3Q99JP6 356 aa11.87□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Pih1d1Q9CQJ2 290 aa11.87□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Rrp15Q9CYX7 281 aaKnown RBP11.87□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Serpinb9bQ9DAV6 377 aa11.87□□□□□ -0.51
Col9a1-202ENSMUST00000088349 C1qtnf1Q9QXP7 281 aa11.87□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Myo18aQ9JMH9 2050 aaKnown RBP11.87□□□□□ -0.51
Col9a1-202ENSMUST00000088349 Fbxl18E9PYR1 771 aa11.87□□□□□ -0.51
Retrieved 100 of 22,080 RNA–protein pairs in 31 ms