RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 Gm6205E9PZS2 359 aa23.63■■□□□ 1.37
Upf3a-201ENSMUST00000043767 VimP20152 466 aaKnown RBP23.63■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Ccnb1P24860 430 aa23.63■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Nsun2Q1HFZ0 757 aaKnown RBP23.63■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Ccndbp1Q3TVC7 356 aa23.63■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Lipo3Q3UT41 399 aa23.63■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Proser3Q7TSA6 634 aa23.63■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Tmem169Q8BG50 297 aa23.63■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Samd3Q8C4H2 520 aa23.63■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Gm6367Q8C6L9 287 aa23.63■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Taf10Q8K0H5 218 aa23.63■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Barhl2Q8VIB5 384 aa23.63■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Pcdha5Q91Y15 934 aa23.63■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Abcf2Q99LE6 628 aaKnown RBP23.63■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Snx24Q9CRB0 169 aa23.63■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Htra2Q9JIY5 458 aa23.63■■□□□ 1.37
Upf3a-201ENSMUST00000043767 NumbQ9QZS3 653 aa23.63■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Smarcb1Q9Z0H3 385 aa23.63■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Vmn2r11E9Q4X4 861 aa23.63■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Vmn2r111K7N674 857 aa23.63■■□□□ 1.37
Upf3a-201ENSMUST00000043767 RabggtbP53612 339 aa23.63■■□□□ 1.37
Upf3a-201ENSMUST00000043767 GsapQ3TCV3 858 aa23.63■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Pid1Q3UBG2 217 aa23.63■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Mtus1Q5HZI1 1210 aa23.63■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Syn2Q64332 586 aa23.63■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Rbm34Q8C5L7 375 aaKnown RBP23.63■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Rbm12Q8R4X3 992 aaKnown RBP23.63■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Sytl2Q99N50 950 aa23.63■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Map3k14Q9WUL6 942 aa23.63■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Entpd5Q9WUZ9 427 aa23.63■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Znf106O88466 1888 aa23.62■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Ccdc144bE9PVZ3 520 aa23.62■■□□□ 1.37
Upf3a-201ENSMUST00000043767 4930426L09RikE9Q0N7 123 aa23.62■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Gm8334F7CD45 553 aa23.62■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Kifc3O35231 824 aa23.62■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Timm13P62075 95 aa23.62■■□□□ 1.37
Upf3a-201ENSMUST00000043767 YwhaqP68254 245 aaKnown RBP23.62■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Afg1lQ3V384 480 aa23.62■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Fbxw11Q5SRY7 542 aaKnown RBP23.62■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Trim38Q5SZ99 471 aa23.62■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Cd6Q61003 665 aa23.62■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Zfp512bQ6PHP4 879 aa23.62■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Best2Q8BGM5 508 aa23.62■■□□□ 1.37
Upf3a-201ENSMUST00000043767 CgasQ8C6L5 507 aa23.62■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Dnm1lQ8K1M6 742 aa23.62■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Fads1Q920L1 447 aa23.62■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Fbxo32Q9CPU7 355 aa23.62■■□□□ 1.37
Upf3a-201ENSMUST00000043767 ArskQ9D2L1 553 aa23.62■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Nop56Q9D6Z1 580 aaKnown RBP23.62■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Oaz3Q9R109 243 aa23.62■■□□□ 1.37
Upf3a-201ENSMUST00000043767 PignQ9R1S3 931 aa23.62■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Nfs1Q9Z1J3 459 aa23.62■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Gm5538W4VSP6 401 aa23.62■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Mmrn1B2RPV6 1210 aa23.61■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Ccdc8D3YZV8 685 aa23.61■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Ptger1P35375 405 aa23.61■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Kcnj6P48542 425 aa23.61■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Pon1P52430 355 aa23.61■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Plcl1Q3USB7 1096 aa23.61■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Arhgap26Q6ZQ82 814 aa23.61■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Olfr1198Q7TR12 308 aa23.61■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Q80Y73 168 aa23.61■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Lrrc4cQ8C031 640 aa23.61■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Ccdc65Q8VHI7 493 aa23.61■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Cep19Q9CQA8 163 aa23.61■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Tmem59Q9QY73 323 aa23.61■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Nrg3O35181 713 aa23.61■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Stat5aP42230 793 aa23.61■■□□□ 1.37
Upf3a-201ENSMUST00000043767 SiaeP70665 541 aa23.61■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Pld5Q3UNN8 536 aa23.61■■□□□ 1.37
Upf3a-201ENSMUST00000043767 TceancQ3US16 359 aa23.61■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Dnajc8Q6NZB0 253 aaKnown RBP23.61■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Zswim6Q80TB7 1207 aa23.61■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Chn2Q80XD1 332 aa23.61■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Q8BHN7 327 aa23.61■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Lysmd3Q99LE3 305 aa23.61■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Cdk5rap3Q99LM2 503 aa23.61■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Rmdn1Q9DCV4 305 aa23.61■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Ccdc86Q9JJ89 426 aa23.61■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Clec1bQ9JL99 229 aa23.61■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Rhox3cA2AWM0 215 aa23.6■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Rhox3hL7MU37 215 aa23.6■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Gfra2O08842 464 aa23.6■■□□□ 1.37
Upf3a-201ENSMUST00000043767 SrgnP13609 152 aa23.6■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Wnt6P22727 364 aa23.6■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Faf2Q3TDN2 445 aa23.6■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Mrgprx2Q3UG50 352 aa23.6■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Rhox3aQ4TU90 215 aa23.6■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Trpm8Q8R4D5 1104 aa23.6■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Usp3Q91W36 520 aaKnown RBP23.6■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Grhl1Q921D9 618 aa23.6■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Cyp4v2Q9DBW0 525 aa23.6■■□□□ 1.37
Upf3a-201ENSMUST00000043767 NbnQ9R207 751 aa23.6■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Slc23a1Q9Z2J0 605 aa23.6■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Lcn6A2AJB9 181 aa23.6■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Malrd1A2AJX4 2123 aa23.6■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Ccnyl1D3YUJ3 367 aa23.6■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Wdr95D3Z7A8 784 aa23.6■■□□□ 1.37
Upf3a-201ENSMUST00000043767 AmhP27106 555 aa23.6■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Rpl10aP53026 217 aaKnown RBP23.6■■□□□ 1.37
Retrieved 100 of 22,080 RNA–protein pairs in 29.6 ms