RNA–Protein interactions for RNA: ENSMUST00000034713.8

Ldlr-201, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,627 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-201ENSMUST00000034713 Chst10Q6PGK7 356 aa10.17□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Eif4bQ8BGD9 611 aaKnown RBP10.17□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Il33Q8BVZ5 266 aa10.17□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Scara3Q8C850 606 aa10.17□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Mcoln2Q8K595 566 aa10.17□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Slc51aQ8R000 340 aa10.17□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Wdr98Q8VC42 657 aa10.17□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Evi2bQ8VD58 444 aa10.17□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Stx18Q8VDS8 334 aa10.17□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Rxfp2Q91ZZ5 737 aa10.17□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Mettl16Q9CQG2 553 aaKnown RBP10.17□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Oxct1Q9D0K2 520 aaKnown RBP10.17□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Tubgcp4Q9D4F8 667 aa10.17□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Pgam1Q9DBJ1 254 aa10.17□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Dctn3Q9Z0Y1 186 aa10.17□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Gm5861F6VCN9 180 aa10.17□□□□□ -0.78
Ldlr-201ENSMUST00000034713 4933402N22RikF7D1B3 190 aa10.17□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Rgs4O08899 205 aa10.17□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Rab21P35282 222 aa10.17□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Tjp1P39447 1745 aaKnown RBP10.17□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Gtf2bP62915 316 aa10.17□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Pyroxd1Q3TMV7 498 aa10.17□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Mrgprb1Q3UG61 350 aa10.17□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Pik3r5Q5SW28 871 aa10.17□□□□□ -0.78
Ldlr-201ENSMUST00000034713 HrQ61645 1182 aa10.17□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Fbxo38Q8BMI0 1194 aa10.17□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Lamtor4Q8CF66 99 aa10.17□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Sbk1Q8QZX0 417 aa10.17□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Gtse1Q8R080 741 aa10.17□□□□□ -0.78
Ldlr-201ENSMUST00000034713 4930519G04RikQ9CPT7 205 aa10.17□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Tmem68Q9D850 329 aa10.17□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Trpc4apQ9JLV2 797 aa10.17□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Kifc1Q9QWT9 674 aa10.17□□□□□ -0.78
Ldlr-201ENSMUST00000034713 FocadA2AKG8 1798 aa10.17□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Smok3cA0A087WSF2 504 aa10.17□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Znf804aA2AKY4 1200 aa10.17□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Ssxb9A2BI93 185 aa10.17□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Gm8257E9Q8R3 264 aa10.17□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Rrm1P07742 792 aa10.17□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Man1a1P45700 655 aa10.17□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Sult1e1P49891 295 aa10.17□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Gabpb1Q00420 383 aa10.17□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Mapre1Q61166 268 aaKnown RBP10.17□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Ldlrap1Q8C142 308 aa10.17□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Slc13a3Q91Y63 600 aa10.17□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Fam49bQ921M7 324 aa10.17□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Me2Q99KE1 589 aa10.17□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Pfdn1Q9CWM4 122 aa10.17□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Cdyl2Q9D5D8 503 aa10.17□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Efhc1Q9D9T8 648 aa10.17□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Slc26a3Q9WVC8 757 aa10.17□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Gm8113E0CXS8 587 aa10.16□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Spata31E9QAF0 1014 aa10.16□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Cdk14O35495 469 aa10.16□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Bmpr2O35607 1038 aa10.16□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Odc1P00860 461 aa10.16□□□□□ -0.78
Ldlr-201ENSMUST00000034713 SpoplQ2M2N2 392 aa10.16□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Tars2Q3UQ84 723 aaKnown RBP10.16□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Nr1h2Q60644 446 aa10.16□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Samd4bQ80XS6 687 aa10.16□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Taf2Q8C176 1104 aa10.16□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Sfrp1Q8C4U3 314 aa10.16□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Ppp1r14cQ8R4S0 164 aa10.16□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Oas1cQ924S2 362 aa10.16□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Rex1bdQ9CYZ6 169 aa10.16□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Stx11Q9D3G5 287 aa10.16□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Ruvbl2Q9WTM5 463 aaKnown RBP10.16□□□□□ -0.78
Ldlr-201ENSMUST00000034713 M1apQ9Z0E1 529 aa10.16□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Wdr72D3YYM4 1114 aa10.16□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Vmn2r74E9PW21 853 aa10.16□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Apold1E9Q0X2 246 aa10.16□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Pcbp1P60335 356 aaKnown RBP10.16□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Adcy6Q01341 1165 aa10.16□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Igsf9Q05BQ1 1179 aa10.16□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Mpzl3Q3V3F6 237 aa10.16□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Kansl1lQ5DTI6 991 aa10.16□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Shroom1Q5SX79 823 aa10.16□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Phlda1Q62392 405 aa10.16□□□□□ -0.78
Ldlr-201ENSMUST00000034713 CapslQ6P8Y1 208 aa10.16□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Zswim5Q80TC6 1188 aa10.16□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Lrrc24Q8BHA1 521 aa10.16□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Irak4Q8R4K2 459 aa10.16□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Ssu72Q9CY97 194 aaKnown RBP10.16□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Wdr12Q9JJA4 423 aa10.16□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Sh2d3cQ9QZS8 854 aa10.16□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Ism1A2ATD1 454 aa10.16□□□□□ -0.78
Ldlr-201ENSMUST00000034713 NuggcD3YWJ0 796 aa10.16□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Trim12cD3Z3L3 497 aa10.16□□□□□ -0.78
Ldlr-201ENSMUST00000034713 PtproE9Q612 1226 aa10.16□□□□□ -0.78
Ldlr-201ENSMUST00000034713 BhmtO35490 407 aaKnown RBP10.16□□□□□ -0.78
Ldlr-201ENSMUST00000034713 AfpP02772 605 aa10.16□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Ass1P16460 412 aa10.16□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Ppp3caP63328 521 aa10.16□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Emc10Q3TAS6 258 aa10.16□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Tgfbrap1Q3UR70 860 aa10.16□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Nr2c1Q505F1 590 aa10.16□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Etaa1Q5SVT3 877 aa10.16□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Pcsk7Q61139 770 aa10.16□□□□□ -0.78
Ldlr-201ENSMUST00000034713 FAM120AQ6A0A9 1112 aaKnown RBP10.16□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Lrfn2Q80TG9 788 aa10.16□□□□□ -0.78
Retrieved 100 of 22,080 RNA–protein pairs in 22.5 ms