RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 Fads2p1Q0VAX3 487 aa14.25□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Tmem35bQ3U0Y2 150 aa14.25□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Mup20Q5FW60 181 aa14.25□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Mief2Q5NCS9 454 aa14.25□□□□□ -0.13
Col5a1-201ENSMUST00000028280 P2ry10Q8BFU7 328 aa14.25□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Med24Q99K74 987 aa14.25□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Gm17175E9Q528 179 aa14.25□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Gm11027G8JL69 66 aa14.25□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Cacnb3P54285 484 aa14.25□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Smyd5Q3TYX3 416 aa14.25□□□□□ -0.13
Col5a1-201ENSMUST00000028280 OscarQ8VBT3 265 aa14.25□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Ilf2Q9CXY6 390 aaKnown RBP14.25□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Q9CYI0 393 aa14.25□□□□□ -0.13
Col5a1-201ENSMUST00000028280 MtrexQ9CZU3 1040 aaKnown RBP14.25□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Abca6Q8K441 1624 aa14.25□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Esp31A8R0W3 114 aa14.25□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Fam196bQ6GQV1 535 aa14.25□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Usp50Q6P8X6 390 aa14.25□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Reep1Q8BGH4 201 aa14.25□□□□□ -0.13
Col5a1-201ENSMUST00000028280 N4bp2l2Q8JZS6 575 aa14.25□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Ssr3Q9DCF9 185 aa14.25□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Ptges3Q9R0Q7 160 aaKnown RBP14.25□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Mapk11Q9WUI1 364 aa14.25□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Trmt1lA2RSY6 728 aaKnown RBP14.25□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Olfr414E9Q5P8 317 aa14.25□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Fcho2Q3UQN2 809 aa14.25□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Dpf2Q61103 391 aaKnown RBP14.25□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Fam96aQ9DCL2 160 aa14.25□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Gm2244L7N2A3 218 aa14.25□□□□□ -0.13
Col5a1-201ENSMUST00000028280 AlbP07724 608 aa14.25□□□□□ -0.13
Col5a1-201ENSMUST00000028280 ApoeP08226 311 aa14.25□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Rpl36P47964 105 aaKnown RBP14.25□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Larp7Q05CL8 570 aaKnown RBP14.25□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Nim1kQ8BHI9 436 aa14.25□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Nemp2Q8CB65 421 aa14.25□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Chrna3Q8R4G9 499 aa14.25□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Nxnl1Q8VC33 217 aa14.25□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Cox18Q8VC74 331 aa14.25□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Use1Q9CQ56 270 aa14.25□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Borcs5Q9D920 195 aa14.25□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Uchl3Q9JKB1 230 aa14.25□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Hoxa2P31245 372 aa14.25□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Drg1P32233 367 aaKnown RBP14.25□□□□□ -0.13
Col5a1-201ENSMUST00000028280 GemP55041 295 aa14.25□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Slc24a2Q14BI1 711 aa14.25□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Tmc3Q7TQ69 1130 aa14.25□□□□□ -0.13
Col5a1-201ENSMUST00000028280 BC048507Q80ZS7 89 aa14.25□□□□□ -0.13
Col5a1-201ENSMUST00000028280 D6Wsu163eQ91YN0 552 aa14.25□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Npm3Q9CPP0 175 aaKnown RBP14.25□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Bmp15Q9Z0L4 392 aa14.25□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Mroh2aD3Z750 1679 aa14.24□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Hpcal1P62748 193 aa14.24□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Slc2a13Q3UHK1 637 aa14.24□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Sfmbt2Q5DTW2 938 aa14.24□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Rnf139Q7TMV1 668 aa14.24□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Fam126bQ8C729 530 aa14.24□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Myo18aQ9JMH9 2050 aaKnown RBP14.24□□□□□ -0.13
Col5a1-201ENSMUST00000028280 A0A1L1ST33 502 aa14.24□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Pik3r3Q64143 461 aa14.24□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Ppwd1Q8CEC6 646 aaKnown RBP14.24□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Mrpl2Q9D773 306 aaKnown RBP14.24□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Gm3033M0QWI0 180 aa14.24□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Gm3532M0QWL4 194 aa14.24□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Hipk1O88904 1210 aa14.24□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Defa8P50706 81 aa14.24□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Ephb2P54763 986 aa14.24□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Scrn3Q3TMH2 418 aa14.24□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Awat2Q6E1M8 333 aa14.24□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Snx8Q8CFD4 459 aa14.24□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Tspan8Q8R3G9 235 aa14.24□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Slc26a4Q9R155 780 aa14.24□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Kif1aP33173 1695 aa14.24□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Zscan4-ps1A0A1C7CYV3 506 aa14.24□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Zscan4dA7KBS4 506 aa14.24□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Pik3r2O08908 722 aa14.24□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Hsf2P38533 535 aa14.24□□□□□ -0.13
Col5a1-201ENSMUST00000028280 PkmP52480 531 aaKnown RBP14.24□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Zscan4fQ3URS2 506 aa14.24□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Cyb5d1Q5NCY3 228 aa14.24□□□□□ -0.13
Col5a1-201ENSMUST00000028280 GpamQ61586 827 aa14.24□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Dnajc1Q61712 552 aaKnown RBP14.24□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Zbtb39Q6PDK0 712 aa14.24□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Zscan4cQ80VJ6 506 aa14.24□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Zbtb46Q8BID6 600 aa14.24□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Slc35g1Q8BY79 368 aa14.24□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Taf8Q9EQH4 308 aa14.24□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Ism1A2ATD1 454 aa14.24□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Rhox3cA2AWM0 215 aa14.24□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Ccdc8D3YZV8 685 aa14.24□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Rhox3hL7MU37 215 aa14.24□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Rhox3aQ4TU90 215 aa14.24□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Cfap206Q6PE87 622 aa14.24□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Drd5Q8BLD9 478 aa14.24□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Fndc5Q8K4Z2 209 aa14.24□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Spef1Q99JL1 234 aa14.24□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Nek3Q9R0A5 511 aa14.24□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Mboat7Q8CHK3 473 aa14.24□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Copg2Q9QXK3 871 aa14.24□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Kpna7C0LLJ0 499 aa14.23□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Usp4P35123 962 aa14.23□□□□□ -0.13
Retrieved 100 of 22,080 RNA–protein pairs in 42.4 ms