RNA–Protein interactions for RNA: ENSMUST00000027988.7

Ccdc3-201, Transcript of Coiled-coil domain-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc3, Length 2,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3-201ENSMUST00000027988 Xkr4Q5GH67 647 aa18.9■□□□□ 0.62
Ccdc3-201ENSMUST00000027988 Etaa1Q5SVT3 877 aa18.9■□□□□ 0.62
Ccdc3-201ENSMUST00000027988 ProcrQ64695 242 aa18.9■□□□□ 0.62
Ccdc3-201ENSMUST00000027988 N4bp1Q6A037 893 aa18.9■□□□□ 0.62
Ccdc3-201ENSMUST00000027988 Abhd10Q6PE15 297 aa18.9■□□□□ 0.62
Ccdc3-201ENSMUST00000027988 Ccdc154Q6RUT8 657 aa18.9■□□□□ 0.62
Ccdc3-201ENSMUST00000027988 GnsQ8BFR4 544 aa18.9■□□□□ 0.62
Ccdc3-201ENSMUST00000027988 Brat1Q8C3R1 822 aa18.9■□□□□ 0.62
Ccdc3-201ENSMUST00000027988 Alas1Q8VC19 642 aa18.9■□□□□ 0.62
Ccdc3-201ENSMUST00000027988 Pcdhgb1Q91XX8 918 aa18.9■□□□□ 0.62
Ccdc3-201ENSMUST00000027988 Pacsin3Q99JB8 424 aa18.9■□□□□ 0.62
Ccdc3-201ENSMUST00000027988 Ecrg4Q99LS0 148 aa18.9■□□□□ 0.62
Ccdc3-201ENSMUST00000027988 Sytl1Q99N80 567 aa18.9■□□□□ 0.62
Ccdc3-201ENSMUST00000027988 Lrrc71Q9D3W5 558 aa18.9■□□□□ 0.62
Ccdc3-201ENSMUST00000027988 NumbQ9QZS3 653 aa18.9■□□□□ 0.62
Ccdc3-201ENSMUST00000027988 Nme3Q9WV85 169 aa18.9■□□□□ 0.62
Ccdc3-201ENSMUST00000027988 D830030K20RikE9PYQ5 218 aa18.9■□□□□ 0.62
Ccdc3-201ENSMUST00000027988 Gm3043K7N693 218 aa18.9■□□□□ 0.62
Ccdc3-201ENSMUST00000027988 Gm16440K7N6G6 218 aa18.9■□□□□ 0.62
Ccdc3-201ENSMUST00000027988 Gm2244L7N2A3 218 aa18.9■□□□□ 0.62
Ccdc3-201ENSMUST00000027988 Gm3278L7N2D2 218 aa18.9■□□□□ 0.62
Ccdc3-201ENSMUST00000027988 Gm8271L7N2E2 218 aa18.9■□□□□ 0.62
Ccdc3-201ENSMUST00000027988 Sptlc1O35704 473 aa18.9■□□□□ 0.62
Ccdc3-201ENSMUST00000027988 HmgcrQ01237 887 aa18.9■□□□□ 0.62
Ccdc3-201ENSMUST00000027988 Btg1-ps1Q3V0S2 161 aa18.9■□□□□ 0.62
Ccdc3-201ENSMUST00000027988 Btg1-ps2Q3V0X0 161 aa18.9■□□□□ 0.62
Ccdc3-201ENSMUST00000027988 Zfp658Q5PPQ4 887 aa18.9■□□□□ 0.62
Ccdc3-201ENSMUST00000027988 Slc5a10Q5SWY8 596 aa18.9■□□□□ 0.62
Ccdc3-201ENSMUST00000027988 Als2clQ60I26 952 aa18.9■□□□□ 0.62
Ccdc3-201ENSMUST00000027988 Tll1Q62381 1013 aa18.9■□□□□ 0.62
Ccdc3-201ENSMUST00000027988 Ahcyl2Q68FL4 613 aaKnown RBP18.9■□□□□ 0.62
Ccdc3-201ENSMUST00000027988 Aste1Q8BIR2 672 aa18.9■□□□□ 0.62
Ccdc3-201ENSMUST00000027988 Tmem260Q8BMD6 703 aa18.9■□□□□ 0.62
Ccdc3-201ENSMUST00000027988 Rmnd1Q8CI78 450 aa18.9■□□□□ 0.62
Ccdc3-201ENSMUST00000027988 Prpf39Q8K2Z2 665 aa18.9■□□□□ 0.62
Ccdc3-201ENSMUST00000027988 Agap3Q8VHH5 910 aa18.9■□□□□ 0.62
Ccdc3-201ENSMUST00000027988 Cab39lQ9DB16 337 aa18.9■□□□□ 0.62
Ccdc3-201ENSMUST00000027988 PigqQ9QYT7 581 aa18.9■□□□□ 0.62
Ccdc3-201ENSMUST00000027988 Dlc1Q9R0Z9 1092 aa18.9■□□□□ 0.62
Ccdc3-201ENSMUST00000027988 Gbp2Q9Z0E6 589 aa18.9■□□□□ 0.62
Ccdc3-201ENSMUST00000027988 Myo18aQ9JMH9 2050 aaKnown RBP18.9■□□□□ 0.62
Ccdc3-201ENSMUST00000027988 C87414E9PWI7 475 aa18.89■□□□□ 0.62
Ccdc3-201ENSMUST00000027988 Gm3187M0QWW3 260 aa18.89■□□□□ 0.62
Ccdc3-201ENSMUST00000027988 Wnt3aP27467 352 aa18.89■□□□□ 0.62
Ccdc3-201ENSMUST00000027988 Kcnj6P48542 425 aa18.89■□□□□ 0.62
Ccdc3-201ENSMUST00000027988 CstaP56567 97 aa18.89■□□□□ 0.62
Ccdc3-201ENSMUST00000027988 Pou2f2Q00196 463 aa18.89■□□□□ 0.62
Ccdc3-201ENSMUST00000027988 Ccdc127Q3TC33 260 aa18.89■□□□□ 0.62
Ccdc3-201ENSMUST00000027988 Otol1Q4ZJM7 482 aa18.89■□□□□ 0.62
Ccdc3-201ENSMUST00000027988 Cage1Q5IR70 849 aa18.89■□□□□ 0.62
Ccdc3-201ENSMUST00000027988 Fbxw2Q60584 422 aa18.89■□□□□ 0.62
Ccdc3-201ENSMUST00000027988 Papd5Q68ED3 633 aaKnown RBP18.89■□□□□ 0.62
Ccdc3-201ENSMUST00000027988 Il17reQ8BH06 637 aa18.89■□□□□ 0.62
Ccdc3-201ENSMUST00000027988 Pcmtd2Q8BHD8 359 aa18.89■□□□□ 0.62
Ccdc3-201ENSMUST00000027988 Arhgap29Q8CGF1 1266 aa18.89■□□□□ 0.62
Ccdc3-201ENSMUST00000027988 Ccdc80Q8R2G6 949 aa18.89■□□□□ 0.62
Ccdc3-201ENSMUST00000027988 Actr3Q99JY9 418 aaKnown RBP18.89■□□□□ 0.62
Ccdc3-201ENSMUST00000027988 Ogfod2Q9CQ04 349 aa18.89■□□□□ 0.62
Ccdc3-201ENSMUST00000027988 Neu2Q9JMH3 379 aa18.89■□□□□ 0.62
Ccdc3-201ENSMUST00000027988 Slc23a1Q9Z2J0 605 aa18.89■□□□□ 0.62
Ccdc3-201ENSMUST00000027988 Vmn2r100E9QAZ9 850 aa18.89■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 BpgmP15327 259 aa18.89■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Cyp2f2P33267 491 aa18.89■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Dact3Q0PHV7 610 aa18.89■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Snx25Q3ZT31 840 aa18.89■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Itga3Q62470 1053 aa18.89■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 EfsQ64355 560 aa18.89■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Arl5cQ6P068 179 aa18.89■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Sez6lQ6P1D5 963 aa18.89■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Suz12Q80U70 741 aaKnown RBP18.89■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Washc5Q8C2E7 1159 aaKnown RBP18.89■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Zcchc14Q8VIG0 956 aa18.89■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 TtpalQ9D3D0 343 aa18.89■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Gm21731A0A286YDE9 180 aa18.88■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 2310061I04RikB8JJ69 315 aa18.88■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 NoctO35710 429 aa18.88■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Oaz1P54369 227 aa18.88■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Olfm3P63056 478 aa18.88■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Sparcl1P70663 650 aa18.88■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 4930430A15RikQ05AC5 485 aa18.88■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Pyroxd1Q3TMV7 498 aa18.88■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Gpsm3Q3U1Z5 159 aa18.88■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Fbxo41Q6NS60 873 aa18.88■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Arrdc3Q7TPQ9 414 aa18.88■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Olfr389Q7TRX7 312 aa18.88■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 CcnyQ8BGU5 341 aa18.88■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Grik4Q8BMF5 956 aa18.88■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Anapc5Q8BTZ4 740 aa18.88■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 MyocdQ8VIM5 935 aa18.88■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 CabyrQ9D424 453 aa18.88■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Mettl7bQ9DD20 244 aa18.88■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Ttll8A4Q9F1 832 aa18.88■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Gm15155B1B034 138 aa18.88■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Tfap2aP34056 437 aa18.88■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 UtyP79457 1212 aa18.88■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Nxpe4Q52KP5 543 aa18.88■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 PkdccQ5RJI4 492 aa18.88■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Prrt3Q6PE13 971 aa18.88■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Mis18bp1Q80WQ8 998 aa18.88■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Armc12Q80X86 340 aa18.88■□□□□ 0.61
Retrieved 100 of 22,080 RNA–protein pairs in 24 ms