RNA–Protein interactions for RNA: ENST00000641711.1

PHGDH-224, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 712 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-224ENST00000641711 CYP2F1P24903 491 aa10.67□□□□□ -0.7
PHGDH-224ENST00000641711 PSMA2P25787 234 aa10.67□□□□□ -0.7
PHGDH-224ENST00000641711 RFC1P35251 1148 aaPredicted RBP10.67□□□□□ -0.7
PHGDH-224ENST00000641711 GRIK1P39086 918 aa10.67□□□□□ -0.7
PHGDH-224ENST00000641711 CDKN2BP42772 138 aa10.67□□□□□ -0.7
PHGDH-224ENST00000641711 SSR1P43307 286 aaKnown RBP10.67□□□□□ -0.7
PHGDH-224ENST00000641711 SLC25A11Q02978 314 aaKnown RBP10.67□□□□□ -0.7
PHGDH-224ENST00000641711 CALCOCO2Q13137 446 aa10.67□□□□□ -0.7
PHGDH-224ENST00000641711 PABPC1LQ4VXU2 614 aaKnown RBP10.67□□□□□ -0.7
PHGDH-224ENST00000641711 PKDCCQ504Y2 493 aa10.67□□□□□ -0.7
PHGDH-224ENST00000641711 PPP1R26Q5T8A7 1209 aaPredicted RBP10.67□□□□□ -0.7
PHGDH-224ENST00000641711 DAB2IPQ5VWQ8 1189 aa10.67□□□□□ -0.7
PHGDH-224ENST00000641711 MFSD7Q6UXD7 560 aa10.67□□□□□ -0.7
PHGDH-224ENST00000641711 TMC5Q6UXY8 1006 aa10.67□□□□□ -0.7
PHGDH-224ENST00000641711 SPATA31D4Q6ZUB0 917 aa10.67□□□□□ -0.7
PHGDH-224ENST00000641711 DENND5BQ6ZUT9 1274 aa10.67□□□□□ -0.7
PHGDH-224ENST00000641711 PAQR9Q6ZVX9 377 aa10.67□□□□□ -0.7
PHGDH-224ENST00000641711 TRMT10CQ7L0Y3 403 aaKnown RBP10.67□□□□□ -0.7
PHGDH-224ENST00000641711 ANKS1BQ7Z6G8 1248 aa10.67□□□□□ -0.7
PHGDH-224ENST00000641711 TTC9BQ8N6N2 239 aa10.67□□□□□ -0.7
PHGDH-224ENST00000641711 ARFGAP1Q8N6T3 406 aa10.67□□□□□ -0.7
PHGDH-224ENST00000641711 CCDC89Q8N998 374 aa10.67□□□□□ -0.7
PHGDH-224ENST00000641711 PDZD8Q8NEN9 1154 aa10.67□□□□□ -0.7
PHGDH-224ENST00000641711 IPO4Q8TEX9 1081 aaKnown RBP10.67□□□□□ -0.7
PHGDH-224ENST00000641711 STK32AQ8WU08 396 aa10.67□□□□□ -0.7
PHGDH-224ENST00000641711 ATG4AQ8WYN0 398 aa10.67□□□□□ -0.7
PHGDH-224ENST00000641711 NKD2Q969F2 451 aaPredicted RBP10.67□□□□□ -0.7
PHGDH-224ENST00000641711 RNF25Q96BH1 459 aaPredicted RBP10.67□□□□□ -0.7
PHGDH-224ENST00000641711 ZBTB9Q96C00 473 aa10.67□□□□□ -0.7
PHGDH-224ENST00000641711 SNF8Q96H20 258 aa10.67□□□□□ -0.7
PHGDH-224ENST00000641711 DUSP16Q9BY84 665 aa10.67□□□□□ -0.7
PHGDH-224ENST00000641711 FOXP3Q9BZS1 431 aa10.67□□□□□ -0.7
PHGDH-224ENST00000641711 FBXO44Q9H4M3 255 aa10.67□□□□□ -0.7
PHGDH-224ENST00000641711 CYLDQ9NQC7 956 aa10.67□□□□□ -0.7
PHGDH-224ENST00000641711 FAM49BQ9NUQ9 324 aa10.67□□□□□ -0.7
PHGDH-224ENST00000641711 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.67□□□□□ -0.7
PHGDH-224ENST00000641711 ATP8A1Q9Y2Q0 1164 aa10.67□□□□□ -0.7
PHGDH-224ENST00000641711 FAM92AA1XBS5 289 aa10.66□□□□□ -0.7
PHGDH-224ENST00000641711 C3orf70A6NLC5 250 aaPredicted RBP10.66□□□□□ -0.7
PHGDH-224ENST00000641711 SRRM3A6NNA2 597 aaPredicted RBP10.66□□□□□ -0.7
PHGDH-224ENST00000641711 XPO1O14980 1071 aaKnown RBP10.66□□□□□ -0.7
PHGDH-224ENST00000641711 CCL16O15467 120 aa10.66□□□□□ -0.7
PHGDH-224ENST00000641711 LIASO43766 372 aa10.66□□□□□ -0.7
PHGDH-224ENST00000641711 LRCH4O75427 683 aa10.66□□□□□ -0.7
PHGDH-224ENST00000641711 RHOP08100 348 aa10.66□□□□□ -0.7
PHGDH-224ENST00000641711 CCDC130P13994 396 aa10.66□□□□□ -0.7
PHGDH-224ENST00000641711 TCF4P15884 667 aa10.66□□□□□ -0.7
PHGDH-224ENST00000641711 DDX6P26196 483 aaKnown RBP eCLIP10.66□□□□□ -0.7
PHGDH-224ENST00000641711 PCK1P35558 622 aa10.66□□□□□ -0.7
PHGDH-224ENST00000641711 SNX1Q13596 522 aa10.66□□□□□ -0.7
PHGDH-224ENST00000641711 TAF12Q16514 161 aa10.66□□□□□ -0.7
PHGDH-224ENST00000641711 HADHQ16836 314 aaKnown RBP10.66□□□□□ -0.7
PHGDH-224ENST00000641711 ATP13A4Q4VNC1 1196 aa10.66□□□□□ -0.7
PHGDH-224ENST00000641711 TFDP3Q5H9I0 405 aa10.66□□□□□ -0.7
PHGDH-224ENST00000641711 DENND2CQ68D51 928 aa10.66□□□□□ -0.7
PHGDH-224ENST00000641711 LEKR1Q6ZMV7 388 aa10.66□□□□□ -0.7
PHGDH-224ENST00000641711 CLEC20AQ6ZU45 233 aa10.66□□□□□ -0.7
PHGDH-224ENST00000641711 CEP128Q6ZU80 1094 aa10.66□□□□□ -0.7
PHGDH-224ENST00000641711 PDZD4Q76G19 769 aaPredicted RBP10.66□□□□□ -0.7
PHGDH-224ENST00000641711 OTOP3Q7RTS5 596 aa10.66□□□□□ -0.7
PHGDH-224ENST00000641711 DNAJB7Q7Z6W7 309 aaPredicted RBP10.66□□□□□ -0.7
PHGDH-224ENST00000641711 HOOK3Q86VS8 718 aa10.66□□□□□ -0.7
PHGDH-224ENST00000641711 TMC8Q8IU68 726 aa10.66□□□□□ -0.7
PHGDH-224ENST00000641711 RELL1Q8IUW5 271 aa10.66□□□□□ -0.7
PHGDH-224ENST00000641711 SCN4BQ8IWT1 228 aa10.66□□□□□ -0.7
PHGDH-224ENST00000641711 SCML4Q8N228 414 aa10.66□□□□□ -0.7
PHGDH-224ENST00000641711 PLCD3Q8N3E9 789 aa10.66□□□□□ -0.7
PHGDH-224ENST00000641711 ARFGAP2Q8N6H7 521 aa10.66□□□□□ -0.7
PHGDH-224ENST00000641711 C12orf29Q8N999 325 aa10.66□□□□□ -0.7
PHGDH-224ENST00000641711 JOSD2Q8TAC2 188 aa10.66□□□□□ -0.7
PHGDH-224ENST00000641711 RAPGEF5Q92565 580 aa10.66□□□□□ -0.7
PHGDH-224ENST00000641711 ACSF2Q96CM8 615 aaPredicted RBP10.66□□□□□ -0.7
PHGDH-224ENST00000641711 ASB2Q96Q27 587 aa10.66□□□□□ -0.7
PHGDH-224ENST00000641711 HEMGNQ9BXL5 484 aa10.66□□□□□ -0.7
PHGDH-224ENST00000641711 SLC4A5Q9BY07 1137 aa10.66□□□□□ -0.7
PHGDH-224ENST00000641711 SYNCQ9H7C4 482 aa10.66□□□□□ -0.7
PHGDH-224ENST00000641711 GDE1Q9NZC3 331 aa10.66□□□□□ -0.7
PHGDH-224ENST00000641711 IL37Q9NZH6 218 aa10.66□□□□□ -0.7
PHGDH-224ENST00000641711 TJP2Q9UDY2 1190 aa10.66□□□□□ -0.7
PHGDH-224ENST00000641711 TSPAN16Q9UKR8 245 aa10.66□□□□□ -0.7
PHGDH-224ENST00000641711 SLC27A5Q9Y2P5 690 aa10.66□□□□□ -0.7
PHGDH-224ENST00000641711 HELZP42694 1942 aaKnown RBP10.66□□□□□ -0.7
PHGDH-224ENST00000641711 REV3LO60673 3130 aa10.66□□□□□ -0.7
PHGDH-224ENST00000641711 SLC38A8A6NNN8 435 aa10.65□□□□□ -0.7
PHGDH-224ENST00000641711 GOLGA8SH3BPF8 625 aa10.65□□□□□ -0.7
PHGDH-224ENST00000641711 CLDN5O00501 218 aa10.65□□□□□ -0.7
PHGDH-224ENST00000641711 DPYSL4O14531 572 aa10.65□□□□□ -0.7
PHGDH-224ENST00000641711 NDC80O14777 642 aa10.65□□□□□ -0.7
PHGDH-224ENST00000641711 IVLP07476 585 aa10.65□□□□□ -0.7
PHGDH-224ENST00000641711 HMGA1P17096 107 aaKnown RBP10.65□□□□□ -0.7
PHGDH-224ENST00000641711 NR1D1P20393 614 aa10.65□□□□□ -0.7
PHGDH-224ENST00000641711 FSHRP23945 695 aa10.65□□□□□ -0.7
PHGDH-224ENST00000641711 ADORA2BP29275 332 aa10.65□□□□□ -0.7
PHGDH-224ENST00000641711 WEE1P30291 646 aa10.65□□□□□ -0.7
PHGDH-224ENST00000641711 SCNN1AP37088 669 aa10.65□□□□□ -0.7
PHGDH-224ENST00000641711 ACADSBP45954 432 aa10.65□□□□□ -0.7
PHGDH-224ENST00000641711 RPL34P49207 117 aaKnown RBP10.65□□□□□ -0.7
PHGDH-224ENST00000641711 IRAK1P51617 712 aa10.65□□□□□ -0.7
PHGDH-224ENST00000641711 ZNF143P52747 638 aaPredicted RBP10.65□□□□□ -0.7
PHGDH-224ENST00000641711 SNX16P57768 344 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms