RNA–Protein interactions for RNA: ENST00000641074.1

PHGDH-209, Transcript of phosphoglycerate dehydrogenase, humanhuman

BASIC

Gene PHGDH, Length 1,780 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-209ENST00000641074 SNX10Q9Y5X0 201 aa18.88■□□□□ 0.61
PHGDH-209ENST00000641074 LAMA2P24043 3122 aaKnown RBP18.88■□□□□ 0.61
PHGDH-209ENST00000641074 SPDYE4A6NLX3 237 aa18.88■□□□□ 0.61
PHGDH-209ENST00000641074 FGF18O76093 207 aa18.88■□□□□ 0.61
PHGDH-209ENST00000641074 NR2C2P49116 596 aa18.88■□□□□ 0.61
PHGDH-209ENST00000641074 DHX9Q08211 1270 aaKnown RBP18.88■□□□□ 0.61
PHGDH-209ENST00000641074 GPS1Q13098 491 aa18.88■□□□□ 0.61
PHGDH-209ENST00000641074 DPYSQ14117 519 aa18.88■□□□□ 0.61
PHGDH-209ENST00000641074 RHBDF2Q6PJF5 856 aa18.88■□□□□ 0.61
PHGDH-209ENST00000641074 LRRC45Q96CN5 670 aa18.88■□□□□ 0.61
PHGDH-209ENST00000641074 CEP295NLQ96MC4 621 aa18.88■□□□□ 0.61
PHGDH-209ENST00000641074 TXLNGYQ9BZA5 131 aa18.88■□□□□ 0.61
PHGDH-209ENST00000641074 PRDM16Q9HAZ2 1276 aa18.88■□□□□ 0.61
PHGDH-209ENST00000641074 TLR8Q9NR97 1041 aaKnown RBP18.88■□□□□ 0.61
PHGDH-209ENST00000641074 CLIC5Q9NZA1 410 aa18.88■□□□□ 0.61
PHGDH-209ENST00000641074 MTRF1LQ9UGC7 380 aaKnown RBP18.88■□□□□ 0.61
PHGDH-209ENST00000641074 ANAPC5Q9UJX4 755 aa18.88■□□□□ 0.61
PHGDH-209ENST00000641074 RARGP13631 454 aa18.87■□□□□ 0.61
PHGDH-209ENST00000641074 CCR1P32246 355 aa18.87■□□□□ 0.61
PHGDH-209ENST00000641074 PSEN1P49768 467 aa18.87■□□□□ 0.61
PHGDH-209ENST00000641074 RAB33AQ14088 237 aa18.87■□□□□ 0.61
PHGDH-209ENST00000641074 BRMS1LQ5PSV4 323 aa18.87■□□□□ 0.61
PHGDH-209ENST00000641074 IZUMO3Q5VZ72 239 aa18.87■□□□□ 0.61
PHGDH-209ENST00000641074 HERC6Q8IVU3 1022 aa18.87■□□□□ 0.61
PHGDH-209ENST00000641074 BBOF1Q8ND07 529 aa18.87■□□□□ 0.61
PHGDH-209ENST00000641074 CLP1Q92989 425 aaKnown RBP18.87■□□□□ 0.61
PHGDH-209ENST00000641074 SERPINB11Q96P15 392 aa18.87■□□□□ 0.61
PHGDH-209ENST00000641074 TTLL2Q9BWV7 592 aa18.87■□□□□ 0.61
PHGDH-209ENST00000641074 ADAM7Q9H2U9 754 aa18.87■□□□□ 0.61
PHGDH-209ENST00000641074 CYP4F11Q9HBI6 524 aa18.87■□□□□ 0.61
PHGDH-209ENST00000641074 USP29Q9HBJ7 922 aa18.87■□□□□ 0.61
PHGDH-209ENST00000641074 MRPL17Q9NRX2 175 aaKnown RBP18.87■□□□□ 0.61
PHGDH-209ENST00000641074 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.87■□□□□ 0.61
PHGDH-209ENST00000641074 DTLQ9NZJ0 730 aa18.87■□□□□ 0.61
PHGDH-209ENST00000641074 OGFRQ9NZT2 677 aa18.87■□□□□ 0.61
PHGDH-209ENST00000641074 HSFX1Q9UBD0 423 aa18.87■□□□□ 0.61
PHGDH-209ENST00000641074 OR12D3Q9UGF7 316 aa18.87■□□□□ 0.61
PHGDH-209ENST00000641074 MAGED2Q9UNF1 606 aaPredicted RBP18.87■□□□□ 0.61
PHGDH-209ENST00000641074 PPFIA2O75334 1257 aa18.86■□□□□ 0.61
PHGDH-209ENST00000641074 STIP1P31948 543 aaKnown RBP18.86■□□□□ 0.61
PHGDH-209ENST00000641074 HCAR3P49019 387 aa18.86■□□□□ 0.61
PHGDH-209ENST00000641074 TPI1P60174 286 aa18.86■□□□□ 0.61
PHGDH-209ENST00000641074 LRRN4Q8WUT4 740 aa18.86■□□□□ 0.61
PHGDH-209ENST00000641074 HERVK_113Q902F9 699 aa18.86■□□□□ 0.61
PHGDH-209ENST00000641074 OSBPL2Q9H1P3 480 aa18.86■□□□□ 0.61
PHGDH-209ENST00000641074 BCLAF3A2AJT9 711 aaKnown RBP18.86■□□□□ 0.61
PHGDH-209ENST00000641074 DNALI1O14645 258 aaPredicted RBP18.86■□□□□ 0.61
PHGDH-209ENST00000641074 DCLK1O15075 740 aa18.86■□□□□ 0.61
PHGDH-209ENST00000641074 LILRB3O75022 631 aa18.86■□□□□ 0.61
PHGDH-209ENST00000641074 TBX18O95935 607 aa18.86■□□□□ 0.61
PHGDH-209ENST00000641074 ZDHHC11BP0C7U3 371 aa18.86■□□□□ 0.61
PHGDH-209ENST00000641074 RPL22P35268 128 aaKnown RBP18.86■□□□□ 0.61
PHGDH-209ENST00000641074 HSD17B3P37058 310 aa18.86■□□□□ 0.61
PHGDH-209ENST00000641074 GGCXP38435 758 aa18.86■□□□□ 0.61
PHGDH-209ENST00000641074 NRLP54845 237 aa18.86■□□□□ 0.61
PHGDH-209ENST00000641074 CAV1Q03135 178 aa18.86■□□□□ 0.61
PHGDH-209ENST00000641074 PPP2R5DQ14738 602 aa18.86■□□□□ 0.61
PHGDH-209ENST00000641074 UAP1Q16222 522 aaPredicted RBP18.86■□□□□ 0.61
PHGDH-209ENST00000641074 CCDC33Q8N5R6 958 aa18.86■□□□□ 0.61
PHGDH-209ENST00000641074 RAD9AQ99638 391 aa18.86■□□□□ 0.61
PHGDH-209ENST00000641074 ACBD3Q9H3P7 528 aa18.86■□□□□ 0.61
PHGDH-209ENST00000641074 TLR6Q9Y2C9 796 aa18.86■□□□□ 0.61
PHGDH-209ENST00000641074 ATP8A1Q9Y2Q0 1164 aa18.86■□□□□ 0.61
PHGDH-209ENST00000641074 SLC4A7Q9Y6M7 1214 aa18.86■□□□□ 0.61
PHGDH-209ENST00000641074 GOLGA6BA6NDN3 693 aa18.85■□□□□ 0.61
PHGDH-209ENST00000641074 KCNU1A8MYU2 1149 aa18.85■□□□□ 0.61
PHGDH-209ENST00000641074 MFSD11O43934 449 aa18.85■□□□□ 0.61
PHGDH-209ENST00000641074 PAGE1O75459 146 aa18.85■□□□□ 0.61
PHGDH-209ENST00000641074 LRIG2O94898 1065 aa18.85■□□□□ 0.61
PHGDH-209ENST00000641074 ERCC2P18074 760 aa18.85■□□□□ 0.61
PHGDH-209ENST00000641074 RBL1P28749 1068 aa18.85■□□□□ 0.61
PHGDH-209ENST00000641074 EFEMP1Q12805 493 aa18.85■□□□□ 0.61
PHGDH-209ENST00000641074 XRCC4Q13426 336 aa18.85■□□□□ 0.61
PHGDH-209ENST00000641074 PAFAH1B3Q15102 231 aaKnown RBP18.85■□□□□ 0.61
PHGDH-209ENST00000641074 HIBCHQ6NVY1 386 aaPredicted RBP18.85■□□□□ 0.61
PHGDH-209ENST00000641074 IQCKQ8N0W5 287 aa18.85■□□□□ 0.61
PHGDH-209ENST00000641074 KLHL23Q8NBE8 558 aa18.85■□□□□ 0.61
PHGDH-209ENST00000641074 OLFM3Q96PB7 478 aa18.85■□□□□ 0.61
PHGDH-209ENST00000641074 HAPLN3Q96S86 360 aa18.85■□□□□ 0.61
PHGDH-209ENST00000641074 EPAS1Q99814 870 aa18.85■□□□□ 0.61
PHGDH-209ENST00000641074 ZBP1Q9H171 429 aa18.85■□□□□ 0.61
PHGDH-209ENST00000641074 ZMYND8Q9ULU4 1186 aaPredicted RBP18.85■□□□□ 0.61
PHGDH-209ENST00000641074 TPX2Q9ULW0 747 aaKnown RBP18.85■□□□□ 0.61
PHGDH-209ENST00000641074 YIPF1Q9Y548 306 aa18.85■□□□□ 0.61
PHGDH-209ENST00000641074 LCHNA4D1U4 455 aa18.84■□□□□ 0.61
PHGDH-209ENST00000641074 AGPSO00116 658 aa18.84■□□□□ 0.61
PHGDH-209ENST00000641074 TEX28O15482 410 aa18.84■□□□□ 0.61
PHGDH-209ENST00000641074 KCNN4O15554 427 aa18.84■□□□□ 0.61
PHGDH-209ENST00000641074 CHKAP35790 457 aa18.84■□□□□ 0.61
PHGDH-209ENST00000641074 ZNF135P52742 658 aaPredicted RBP18.84■□□□□ 0.61
PHGDH-209ENST00000641074 FAM193AP78312 1265 aa18.84■□□□□ 0.61
PHGDH-209ENST00000641074 CFAP58Q5T655 872 aa18.84■□□□□ 0.61
PHGDH-209ENST00000641074 ALS2CLQ60I27 953 aa18.84■□□□□ 0.61
PHGDH-209ENST00000641074 CDKL3Q8IVW4 592 aaPredicted RBP18.84■□□□□ 0.61
PHGDH-209ENST00000641074 GPR65Q8IYL9 337 aa18.84■□□□□ 0.61
PHGDH-209ENST00000641074 SP7Q8TDD2 431 aaPredicted RBP18.84■□□□□ 0.61
PHGDH-209ENST00000641074 SLC39A13Q96H72 371 aa18.84■□□□□ 0.61
PHGDH-209ENST00000641074 UBE2OQ9C0C9 1292 aaKnown RBP18.84■□□□□ 0.61
PHGDH-209ENST00000641074 SIK2Q9H0K1 926 aa18.84■□□□□ 0.61
PHGDH-209ENST00000641074 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms