RNA–Protein interactions for RNA: ENST00000640414.1

MECP2-226, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5 BASIC

Gene MECP2, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-226ENST00000640414 ATMQ13315 3056 aa12.13□□□□□ -0.47
MECP2-226ENST00000640414 H0Y8X5 98 aa12.13□□□□□ -0.47
MECP2-226ENST00000640414 GFRA2O00451 464 aa12.13□□□□□ -0.47
MECP2-226ENST00000640414 COCHO43405 550 aa12.13□□□□□ -0.47
MECP2-226ENST00000640414 SLC28A2O43868 658 aa12.13□□□□□ -0.47
MECP2-226ENST00000640414 BRINP1O60477 761 aa12.13□□□□□ -0.47
MECP2-226ENST00000640414 C6P13671 934 aa12.13□□□□□ -0.47
MECP2-226ENST00000640414 LMO2P25791 158 aa12.13□□□□□ -0.47
MECP2-226ENST00000640414 EEF1GP26641 437 aaKnown RBP12.13□□□□□ -0.47
MECP2-226ENST00000640414 IL12RB1P42701 662 aa12.13□□□□□ -0.47
MECP2-226ENST00000640414 LHX1P48742 406 aa12.13□□□□□ -0.47
MECP2-226ENST00000640414 CCT8P50990 548 aa12.13□□□□□ -0.47
MECP2-226ENST00000640414 AFF3P51826 1226 aaKnown RBP12.13□□□□□ -0.47
MECP2-226ENST00000640414 WNT7BP56706 349 aa12.13□□□□□ -0.47
MECP2-226ENST00000640414 IL9RQ01113 521 aa12.13□□□□□ -0.47
MECP2-226ENST00000640414 RHDQ02161 417 aa12.13□□□□□ -0.47
MECP2-226ENST00000640414 CRELD2Q6UXH1 353 aaPredicted RBP12.13□□□□□ -0.47
MECP2-226ENST00000640414 NT5DC4Q86YG4 428 aa12.13□□□□□ -0.47
MECP2-226ENST00000640414 CBWD2Q8IUF1 395 aa12.13□□□□□ -0.47
MECP2-226ENST00000640414 FAM114A1Q8IWE2 563 aa12.13□□□□□ -0.47
MECP2-226ENST00000640414 FAM186BQ8IYM0 893 aa12.13□□□□□ -0.47
MECP2-226ENST00000640414 TOP6BLQ8N6T0 577 aa12.13□□□□□ -0.47
MECP2-226ENST00000640414 C1orf127Q8N9H9 656 aa12.13□□□□□ -0.47
MECP2-226ENST00000640414 CXorf38Q8TB03 319 aa12.13□□□□□ -0.47
MECP2-226ENST00000640414 IGSF8Q969P0 613 aa12.13□□□□□ -0.47
MECP2-226ENST00000640414 FAM84AQ96KN4 292 aa12.13□□□□□ -0.47
MECP2-226ENST00000640414 NAP1L5Q96NT1 182 aaPredicted RBP12.13□□□□□ -0.47
MECP2-226ENST00000640414 SYT15Q9BQS2 421 aa12.13□□□□□ -0.47
MECP2-226ENST00000640414 FAM213AQ9BRX8 229 aa12.13□□□□□ -0.47
MECP2-226ENST00000640414 GDAP2Q9NXN4 497 aa12.13□□□□□ -0.47
MECP2-226ENST00000640414 ANKRD6Q9Y2G4 727 aa12.13□□□□□ -0.47
MECP2-226ENST00000640414 FRMD4BQ9Y2L6 1034 aa12.13□□□□□ -0.47
MECP2-226ENST00000640414 SH3BP1Q9Y3L3 701 aa12.13□□□□□ -0.47
MECP2-226ENST00000640414 KNTC1P50748 2209 aa12.13□□□□□ -0.47
MECP2-226ENST00000640414 MYLKQ15746 1914 aa12.12□□□□□ -0.47
MECP2-226ENST00000640414 NEDD8-MDP1E9PL57 170 aa12.12□□□□□ -0.47
MECP2-226ENST00000640414 F8VP50 259 aa12.12□□□□□ -0.47
MECP2-226ENST00000640414 KIAA0391O15091 583 aaKnown RBP12.12□□□□□ -0.47
MECP2-226ENST00000640414 SLC16A3O15427 465 aaKnown RBP12.12□□□□□ -0.47
MECP2-226ENST00000640414 CACNG3O60359 315 aa12.12□□□□□ -0.47
MECP2-226ENST00000640414 SERPINC1P01008 464 aa12.12□□□□□ -0.47
MECP2-226ENST00000640414 IGLV3-19P01714 112 aa12.12□□□□□ -0.47
MECP2-226ENST00000640414 EPB41P11171 864 aaKnown RBP12.12□□□□□ -0.47
MECP2-226ENST00000640414 OXTRP30559 389 aa12.12□□□□□ -0.47
MECP2-226ENST00000640414 MTIF2P46199 727 aaKnown RBP12.12□□□□□ -0.47
MECP2-226ENST00000640414 COPB1P53618 953 aaKnown RBP12.12□□□□□ -0.47
MECP2-226ENST00000640414 MARSP56192 900 aaKnown RBP12.12□□□□□ -0.47
MECP2-226ENST00000640414 TFAMQ00059 246 aaKnown RBP12.12□□□□□ -0.47
MECP2-226ENST00000640414 POU5F1Q01860 360 aaKnown RBP12.12□□□□□ -0.47
MECP2-226ENST00000640414 CYP27A1Q02318 531 aa12.12□□□□□ -0.47
MECP2-226ENST00000640414 KCNH2Q12809 1159 aa12.12□□□□□ -0.47
MECP2-226ENST00000640414 IFRD2Q12894 506 aaPredicted RBP12.12□□□□□ -0.47
MECP2-226ENST00000640414 DNAJC3Q13217 504 aa12.12□□□□□ -0.47
MECP2-226ENST00000640414 STARD3Q14849 445 aa12.12□□□□□ -0.47
MECP2-226ENST00000640414 SOWAHAQ2M3V2 549 aa12.12□□□□□ -0.47
MECP2-226ENST00000640414 CCDC40Q4G0X9 1142 aa12.12□□□□□ -0.47
MECP2-226ENST00000640414 PKDCCQ504Y2 493 aa12.12□□□□□ -0.47
MECP2-226ENST00000640414 HES3Q5TGS1 186 aa12.12□□□□□ -0.47
MECP2-226ENST00000640414 SARM1Q6SZW1 724 aa12.12□□□□□ -0.47
MECP2-226ENST00000640414 LAYNQ6UX15 382 aa12.12□□□□□ -0.47
MECP2-226ENST00000640414 ERICH1Q86X53 443 aa12.12□□□□□ -0.47
MECP2-226ENST00000640414 TRIM59Q8IWR1 403 aa12.12□□□□□ -0.47
MECP2-226ENST00000640414 GPD1LQ8N335 351 aa12.12□□□□□ -0.47
MECP2-226ENST00000640414 LRRC52Q8N7C0 313 aa12.12□□□□□ -0.47
MECP2-226ENST00000640414 SNX19Q92543 992 aa12.12□□□□□ -0.47
MECP2-226ENST00000640414 PCED1BQ96HM7 432 aa12.12□□□□□ -0.47
MECP2-226ENST00000640414 C8orf48Q96LL4 319 aa12.12□□□□□ -0.47
MECP2-226ENST00000640414 SLITRK1Q96PX8 696 aa12.12□□□□□ -0.47
MECP2-226ENST00000640414 TUBGCP2Q9BSJ2 902 aa12.12□□□□□ -0.47
MECP2-226ENST00000640414 VPS16Q9H269 839 aa12.12□□□□□ -0.47
MECP2-226ENST00000640414 METTL14Q9HCE5 456 aaKnown RBP12.12□□□□□ -0.47
MECP2-226ENST00000640414 KIAA1586Q9HCI6 787 aa12.12□□□□□ -0.47
MECP2-226ENST00000640414 TAB2Q9NYJ8 693 aa12.12□□□□□ -0.47
MECP2-226ENST00000640414 IFNKQ9P0W0 207 aa12.12□□□□□ -0.47
MECP2-226ENST00000640414 ARMCX3Q9UH62 379 aaPredicted RBP12.12□□□□□ -0.47
MECP2-226ENST00000640414 STON1Q9Y6Q2 735 aa12.12□□□□□ -0.47
MECP2-226ENST00000640414 CABIN1Q9Y6J0 2220 aa12.12□□□□□ -0.47
MECP2-226ENST00000640414 PTPN13Q12923 2485 aa12.11□□□□□ -0.47
MECP2-226ENST00000640414 ZNF233A6NK53 670 aa12.11□□□□□ -0.47
MECP2-226ENST00000640414 CBX4O00257 560 aa12.11□□□□□ -0.47
MECP2-226ENST00000640414 ENC1O14682 589 aa12.11□□□□□ -0.47
MECP2-226ENST00000640414 MAPK13O15264 365 aa12.11□□□□□ -0.47
MECP2-226ENST00000640414 RFPL3O75679 317 aa12.11□□□□□ -0.47
MECP2-226ENST00000640414 IL18RAPO95256 599 aa12.11□□□□□ -0.47
MECP2-226ENST00000640414 TYRP14679 529 aa12.11□□□□□ -0.47
MECP2-226ENST00000640414 ACTN2P35609 894 aa12.11□□□□□ -0.47
MECP2-226ENST00000640414 GRIA4P48058 902 aa12.11□□□□□ -0.47
MECP2-226ENST00000640414 CACNA2D1P54289 1103 aa12.11□□□□□ -0.47
MECP2-226ENST00000640414 UBASH3AP57075 661 aa12.11□□□□□ -0.47
MECP2-226ENST00000640414 MCCD1P59942 119 aaPredicted RBP12.11□□□□□ -0.47
MECP2-226ENST00000640414 NR1I3Q14994 352 aa12.11□□□□□ -0.47
MECP2-226ENST00000640414 TEAD4Q15561 434 aa12.11□□□□□ -0.47
MECP2-226ENST00000640414 SNRNP35Q16560 246 aaKnown RBP12.11□□□□□ -0.47
MECP2-226ENST00000640414 KCNT1Q5JUK3 1230 aa12.11□□□□□ -0.47
MECP2-226ENST00000640414 TDRD10Q5VZ19 366 aaKnown RBP12.11□□□□□ -0.47
MECP2-226ENST00000640414 CACUL1Q86Y37 369 aa12.11□□□□□ -0.47
MECP2-226ENST00000640414 TMPRSS6Q8IU80 811 aa12.11□□□□□ -0.47
MECP2-226ENST00000640414 ANKRD20A12PQ8NF67 263 aa12.11□□□□□ -0.47
MECP2-226ENST00000640414 PLEKHO2Q8TD55 490 aa12.11□□□□□ -0.47
MECP2-226ENST00000640414 KBTBD7Q8WVZ9 684 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms