RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 CDKL3Q8IVW4 592 aaPredicted RBP15.06■□□□□ 0
SCARB2-221ENST00000640341 TRIM42Q8IWZ5 723 aa15.06■□□□□ 0
SCARB2-221ENST00000640341 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.06■□□□□ 0
SCARB2-221ENST00000640341 AZIN2Q96A70 460 aa15.06■□□□□ 0
SCARB2-221ENST00000640341 GBA2Q9HCG7 927 aaPredicted RBP15.06■□□□□ 0
SCARB2-221ENST00000640341 ERAP1Q9NZ08 941 aa15.06■□□□□ 0
SCARB2-221ENST00000640341 PPM1HQ9ULR3 514 aa15.06■□□□□ 0
SCARB2-221ENST00000640341 LRCH1Q9Y2L9 728 aa15.06■□□□□ 0
SCARB2-221ENST00000640341 PHIPQ8WWQ0 1821 aa15.06■□□□□ 0
SCARB2-221ENST00000640341 TXNDC9O14530 226 aa15.05■□□□□ 0
SCARB2-221ENST00000640341 DNAJC6O75061 913 aa15.05■□□□□ 0
SCARB2-221ENST00000640341 SP100P23497 879 aaPredicted RBP15.05■□□□□ 0
SCARB2-221ENST00000640341 SERPINB6P35237 376 aa15.05■□□□□ 0
SCARB2-221ENST00000640341 GABRB2P47870 512 aa15.05■□□□□ 0
SCARB2-221ENST00000640341 SOWAHAQ2M3V2 549 aa15.05■□□□□ 0
SCARB2-221ENST00000640341 TCHHL1Q5QJ38 904 aaPredicted RBP15.05■□□□□ 0
SCARB2-221ENST00000640341 COLGALT1Q8NBJ5 622 aa15.05■□□□□ 0
SCARB2-221ENST00000640341 ADAM32Q8TC27 787 aa15.05■□□□□ 0
SCARB2-221ENST00000640341 VPS33BQ9H267 617 aa15.05■□□□□ 0
SCARB2-221ENST00000640341 SPATS2LQ9NUQ6 558 aaKnown RBP15.05■□□□□ 0
SCARB2-221ENST00000640341 NDE1Q9NXR1 346 aa15.05■□□□□ 0
SCARB2-221ENST00000640341 APOBEC2Q9Y235 224 aaKnown RBP15.05■□□□□ 0
SCARB2-221ENST00000640341 IGKV6-21A0A0C4DH24 114 aa15.05■□□□□ -0
SCARB2-221ENST00000640341 A6NHS1 94 aa15.05■□□□□ -0
SCARB2-221ENST00000640341 PROCP04070 461 aa15.05■□□□□ -0
SCARB2-221ENST00000640341 GNAT1P11488 350 aa15.05■□□□□ -0
SCARB2-221ENST00000640341 TGM2P21980 687 aa15.05■□□□□ -0
SCARB2-221ENST00000640341 EDNRBP24530 442 aa15.05■□□□□ -0
SCARB2-221ENST00000640341 ITGA9Q13797 1035 aa15.05■□□□□ -0
SCARB2-221ENST00000640341 C10orf107Q8IVU9 208 aa15.05■□□□□ -0
SCARB2-221ENST00000640341 AFG1LQ8WV93 481 aa15.05■□□□□ -0
SCARB2-221ENST00000640341 MPHOSPH6Q99547 160 aaKnown RBP15.05■□□□□ -0
SCARB2-221ENST00000640341 CPSF2Q9P2I0 782 aaKnown RBP15.05■□□□□ -0
SCARB2-221ENST00000640341 STX18Q9P2W9 335 aaKnown RBP15.05■□□□□ -0
SCARB2-221ENST00000640341 SLC1A6P48664 564 aa15.05■□□□□ -0
SCARB2-221ENST00000640341 CACNA2D1P54289 1103 aa15.05■□□□□ -0
SCARB2-221ENST00000640341 PITX1P78337 314 aaPredicted RBP15.05■□□□□ -0
SCARB2-221ENST00000640341 KRT72Q14CN4 511 aa15.05■□□□□ -0
SCARB2-221ENST00000640341 DCAF6Q58WW2 860 aa15.05■□□□□ -0
SCARB2-221ENST00000640341 ZNF534Q76KX8 674 aa15.05■□□□□ -0
SCARB2-221ENST00000640341 PHC3Q8NDX5 983 aa15.05■□□□□ -0
SCARB2-221ENST00000640341 ATP2A3Q93084 1043 aa15.05■□□□□ -0
SCARB2-221ENST00000640341 CYP3A43Q9HB55 503 aa15.05■□□□□ -0
SCARB2-221ENST00000640341 KRT82Q9NSB4 513 aa15.05■□□□□ -0
SCARB2-221ENST00000640341 DTLQ9NZJ0 730 aa15.05■□□□□ -0
SCARB2-221ENST00000640341 CCDC189A1A4V9 331 aa15.04■□□□□ -0
SCARB2-221ENST00000640341 GAS2O43903 313 aaKnown RBP15.04■□□□□ -0
SCARB2-221ENST00000640341 ENDOD1O94919 500 aa15.04■□□□□ -0
SCARB2-221ENST00000640341 C22orf31O95567 290 aa15.04■□□□□ -0
SCARB2-221ENST00000640341 C1QAP02745 245 aa15.04■□□□□ -0
SCARB2-221ENST00000640341 ANPEPP15144 967 aa15.04■□□□□ -0
SCARB2-221ENST00000640341 PRKCHP24723 683 aa15.04■□□□□ -0
SCARB2-221ENST00000640341 LMO2P25791 158 aa15.04■□□□□ -0
SCARB2-221ENST00000640341 ARL4AP40617 200 aa15.04■□□□□ -0
SCARB2-221ENST00000640341 USP4Q13107 963 aa15.04■□□□□ -0
SCARB2-221ENST00000640341 ZNF618Q5T7W0 954 aa15.04■□□□□ -0
SCARB2-221ENST00000640341 C7orf26Q96N11 449 aa15.04■□□□□ -0
SCARB2-221ENST00000640341 CSPG4P5Q96PW8 444 aa15.04■□□□□ -0
SCARB2-221ENST00000640341 ZNF184Q99676 751 aaPredicted RBP15.04■□□□□ -0
SCARB2-221ENST00000640341 UNKQ9C0B0 810 aaKnown RBP15.04■□□□□ -0
SCARB2-221ENST00000640341 GOLGA2P5Q9HBQ8 144 aa15.04■□□□□ -0
SCARB2-221ENST00000640341 E9PBE3 544 aa15.04■□□□□ -0
SCARB2-221ENST00000640341 NEMP1O14524 444 aa15.04■□□□□ -0
SCARB2-221ENST00000640341 KLHL41O60662 606 aa15.04■□□□□ -0
SCARB2-221ENST00000640341 GABBR2O75899 941 aa15.04■□□□□ -0
SCARB2-221ENST00000640341 TNFAIP2Q03169 654 aa15.04■□□□□ -0
SCARB2-221ENST00000640341 PLPPR4Q7Z2D5 763 aa15.04■□□□□ -0
SCARB2-221ENST00000640341 PID1Q7Z2X4 250 aa15.04■□□□□ -0
SCARB2-221ENST00000640341 DNAAF3Q8N9W5 541 aa15.04■□□□□ -0
SCARB2-221ENST00000640341 PPP4R1Q8TF05 950 aa15.04■□□□□ -0
SCARB2-221ENST00000640341 HTR3CQ8WXA8 447 aa15.04■□□□□ -0
SCARB2-221ENST00000640341 CDKL2Q92772 493 aa15.04■□□□□ -0
SCARB2-221ENST00000640341 KCTD15Q96SI1 283 aaPredicted RBP15.04■□□□□ -0
SCARB2-221ENST00000640341 TBCBQ99426 244 aa15.04■□□□□ -0
SCARB2-221ENST00000640341 SIRPGQ9P1W8 387 aa15.04■□□□□ -0
SCARB2-221ENST00000640341 RPS6KL1Q9Y6S9 549 aa15.04■□□□□ -0
SCARB2-221ENST00000640341 GOLGA8QA0A0J9YX86 632 aa15.04■□□□□ -0
SCARB2-221ENST00000640341 BCLAF3A2AJT9 711 aaKnown RBP15.04■□□□□ -0
SCARB2-221ENST00000640341 GOLGA8OA6NCC3 632 aa15.04■□□□□ -0
SCARB2-221ENST00000640341 GOLGA8NF8WBI6 632 aa15.04■□□□□ -0
SCARB2-221ENST00000640341 TRDMT1O14717 391 aaKnown RBP15.04■□□□□ -0
SCARB2-221ENST00000640341 ATP9BO43861 1147 aa15.04■□□□□ -0
SCARB2-221ENST00000640341 MCF2P10911 925 aa15.04■□□□□ -0
SCARB2-221ENST00000640341 PSMB4P28070 264 aa15.04■□□□□ -0
SCARB2-221ENST00000640341 L1CAMP32004 1257 aa15.04■□□□□ -0
SCARB2-221ENST00000640341 PDE1CQ14123 709 aaPredicted RBP15.04■□□□□ -0
SCARB2-221ENST00000640341 HIC1Q14526 733 aa15.04■□□□□ -0
SCARB2-221ENST00000640341 TTLL4Q14679 1199 aa15.04■□□□□ -0
SCARB2-221ENST00000640341 DPY19L2Q6NUT2 758 aa15.04■□□□□ -0
SCARB2-221ENST00000640341 RASSF3Q86WH2 238 aa15.04■□□□□ -0
SCARB2-221ENST00000640341 PIWIL2Q8TC59 973 aaKnown RBP15.04■□□□□ -0
SCARB2-221ENST00000640341 ZMAT2Q96NC0 199 aaKnown RBP15.04■□□□□ -0
SCARB2-221ENST00000640341 OXCT2Q9BYC2 517 aaPredicted RBP15.04■□□□□ -0
SCARB2-221ENST00000640341 ASB7Q9H672 318 aa15.04■□□□□ -0
SCARB2-221ENST00000640341 CAB39LQ9H9S4 337 aa15.04■□□□□ -0
SCARB2-221ENST00000640341 XPNPEP3Q9NQH7 507 aa15.04■□□□□ -0
SCARB2-221ENST00000640341 THAP1Q9NVV9 213 aa15.04■□□□□ -0
SCARB2-221ENST00000640341 UBP1Q9NZI7 540 aa15.04■□□□□ -0
SCARB2-221ENST00000640341 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.03■□□□□ -0
SCARB2-221ENST00000640341 SOCS7O14512 581 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms