RNA–Protein interactions for RNA: ENST00000639290.1

CCDC7-213, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,542 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-213ENST00000639290 CACNA2D3Q8IZS8 1091 aa3.74□□□□□ -1.81
CCDC7-213ENST00000639290 IL22RA1Q8N6P7 574 aa3.74□□□□□ -1.81
CCDC7-213ENST00000639290 C3orf20Q8ND61 904 aa3.74□□□□□ -1.81
CCDC7-213ENST00000639290 ADAMTS18Q8TE60 1221 aa3.74□□□□□ -1.81
CCDC7-213ENST00000639290 SCFD1Q8WVM8 642 aa3.74□□□□□ -1.81
CCDC7-213ENST00000639290 VOPP1Q96AW1 172 aa3.74□□□□□ -1.81
CCDC7-213ENST00000639290 ZFP42Q96MM3 310 aa3.74□□□□□ -1.81
CCDC7-213ENST00000639290 TAAR9Q96RI9 348 aa3.74□□□□□ -1.81
CCDC7-213ENST00000639290 SLC6A17Q9H1V8 727 aa3.74□□□□□ -1.81
CCDC7-213ENST00000639290 ZNF395Q9H8N7 513 aaPredicted RBP3.74□□□□□ -1.81
CCDC7-213ENST00000639290 PREBQ9HCU5 417 aa3.74□□□□□ -1.81
CCDC7-213ENST00000639290 CCM2LQ9NUG4 571 aaPredicted RBP3.74□□□□□ -1.81
CCDC7-213ENST00000639290 DDX43Q9NXZ2 648 aaKnown RBP3.74□□□□□ -1.81
CCDC7-213ENST00000639290 USP25Q9UHP3 1055 aa3.74□□□□□ -1.81
CCDC7-213ENST00000639290 PRKAB1Q9Y478 270 aa3.74□□□□□ -1.81
CCDC7-213ENST00000639290 STK36Q9NRP7 1315 aa3.74□□□□□ -1.81
CCDC7-213ENST00000639290 MXRA5Q9NR99 2828 aa3.74□□□□□ -1.81
CCDC7-213ENST00000639290 TLN2Q9Y4G6 2542 aa3.73□□□□□ -1.81
CCDC7-213ENST00000639290 C9orf172C9J069 976 aa3.73□□□□□ -1.81
CCDC7-213ENST00000639290 CEACAM4O75871 244 aa3.73□□□□□ -1.81
CCDC7-213ENST00000639290 F9P00740 461 aa3.73□□□□□ -1.81
CCDC7-213ENST00000639290 S100BP04271 92 aaPredicted RBP3.73□□□□□ -1.81
CCDC7-213ENST00000639290 PSAPP07602 524 aa3.73□□□□□ -1.81
CCDC7-213ENST00000639290 SNRPBP14678 240 aaKnown RBP3.73□□□□□ -1.81
CCDC7-213ENST00000639290 CPB1P15086 417 aa3.73□□□□□ -1.81
CCDC7-213ENST00000639290 BMP7P18075 431 aa3.73□□□□□ -1.81
CCDC7-213ENST00000639290 HOXC12P31275 282 aa3.73□□□□□ -1.81
CCDC7-213ENST00000639290 RPL9P32969 192 aaKnown RBP3.73□□□□□ -1.81
CCDC7-213ENST00000639290 MAN1A1P33908 653 aa3.73□□□□□ -1.81
CCDC7-213ENST00000639290 SMSP52788 366 aa3.73□□□□□ -1.81
CCDC7-213ENST00000639290 PPARAQ07869 468 aa3.73□□□□□ -1.81
CCDC7-213ENST00000639290 SEPT7Q16181 437 aaKnown RBP3.73□□□□□ -1.81
CCDC7-213ENST00000639290 LONRF3Q496Y0 759 aa3.73□□□□□ -1.81
CCDC7-213ENST00000639290 CES4AQ5XG92 561 aa3.73□□□□□ -1.81
CCDC7-213ENST00000639290 GRAMD4Q6IC98 578 aa3.73□□□□□ -1.81
CCDC7-213ENST00000639290 CD300LGQ6UXG3 332 aa3.73□□□□□ -1.81
CCDC7-213ENST00000639290 C16orf47Q6ZP98 133 aaPredicted RBP3.73□□□□□ -1.81
CCDC7-213ENST00000639290 CAPN12Q6ZSI9 719 aa3.73□□□□□ -1.81
CCDC7-213ENST00000639290 EFL1Q7Z2Z2 1120 aaKnown RBP3.73□□□□□ -1.81
CCDC7-213ENST00000639290 FCHSD1Q86WN1 690 aa3.73□□□□□ -1.81
CCDC7-213ENST00000639290 CEP97Q8IW35 865 aa3.73□□□□□ -1.81
CCDC7-213ENST00000639290 CCDC60Q8IWA6 550 aaPredicted RBP3.73□□□□□ -1.81
CCDC7-213ENST00000639290 CKAP2LQ8IYA6 745 aa3.73□□□□□ -1.81
CCDC7-213ENST00000639290 SUSD3Q96L08 255 aa3.73□□□□□ -1.81
CCDC7-213ENST00000639290 CMKLR1Q99788 373 aa3.73□□□□□ -1.81
CCDC7-213ENST00000639290 SMR3AQ99954 134 aa3.73□□□□□ -1.81
CCDC7-213ENST00000639290 UBA5Q9GZZ9 404 aa3.73□□□□□ -1.81
CCDC7-213ENST00000639290 GPN2Q9H9Y4 310 aaPredicted RBP3.73□□□□□ -1.81
CCDC7-213ENST00000639290 SEL1LQ9UBV2 794 aa3.73□□□□□ -1.81
CCDC7-213ENST00000639290 PISDQ9UG56 409 aa3.73□□□□□ -1.81
CCDC7-213ENST00000639290 DOLKQ9UPQ8 538 aa3.73□□□□□ -1.81
CCDC7-213ENST00000639290 CYP46A1Q9Y6A2 500 aa3.73□□□□□ -1.81
CCDC7-213ENST00000639290 CKAP5Q14008 2032 aa3.73□□□□□ -1.81
CCDC7-213ENST00000639290 MYH9P35579 1960 aaKnown RBP3.73□□□□□ -1.81
CCDC7-213ENST00000639290 TLCD2A6NGC4 264 aa3.73□□□□□ -1.81
CCDC7-213ENST00000639290 HGSO14964 777 aaPredicted RBP3.73□□□□□ -1.81
CCDC7-213ENST00000639290 RAD1O60671 282 aa3.73□□□□□ -1.81
CCDC7-213ENST00000639290 IGHV4-34P06331 123 aa3.73□□□□□ -1.81
CCDC7-213ENST00000639290 GIMD1P0DJR0 217 aa3.73□□□□□ -1.81
CCDC7-213ENST00000639290 DGKAP23743 735 aa3.73□□□□□ -1.81
CCDC7-213ENST00000639290 NFKBIAP25963 317 aa3.73□□□□□ -1.81
CCDC7-213ENST00000639290 CHRNA6Q15825 494 aa3.73□□□□□ -1.81
CCDC7-213ENST00000639290 UPP1Q16831 310 aa3.73□□□□□ -1.81
CCDC7-213ENST00000639290 KRTAP24-1Q3LI83 254 aa3.73□□□□□ -1.81
CCDC7-213ENST00000639290 FUT11Q495W5 492 aa3.73□□□□□ -1.81
CCDC7-213ENST00000639290 TTC31Q49AM3 519 aaPredicted RBP3.73□□□□□ -1.81
CCDC7-213ENST00000639290 ALG1LQ6GMV1 187 aa3.73□□□□□ -1.81
CCDC7-213ENST00000639290 SLC27A1Q6PCB7 646 aa3.73□□□□□ -1.81
CCDC7-213ENST00000639290 ZNF765Q7L2R6 523 aa3.73□□□□□ -1.81
CCDC7-213ENST00000639290 MRGPRGQ86SM5 289 aa3.73□□□□□ -1.81
CCDC7-213ENST00000639290 DCP2Q8IU60 420 aaKnown RBP3.73□□□□□ -1.81
CCDC7-213ENST00000639290 CCDC83Q8IWF9 413 aa3.73□□□□□ -1.81
CCDC7-213ENST00000639290 SLC25A45Q8N413 288 aa3.73□□□□□ -1.81
CCDC7-213ENST00000639290 ZNF511Q8NB15 262 aa3.73□□□□□ -1.81
CCDC7-213ENST00000639290 ACRBPQ8NEB7 543 aa3.73□□□□□ -1.81
CCDC7-213ENST00000639290 RIN3Q8TB24 985 aa3.73□□□□□ -1.81
CCDC7-213ENST00000639290 PMM1Q92871 262 aa3.73□□□□□ -1.81
CCDC7-213ENST00000639290 USP7Q93009 1102 aa3.73□□□□□ -1.81
CCDC7-213ENST00000639290 GJA10Q969M2 543 aa3.73□□□□□ -1.81
CCDC7-213ENST00000639290 WBP2Q969T9 261 aa3.73□□□□□ -1.81
CCDC7-213ENST00000639290 LENG9Q96B70 501 aa3.73□□□□□ -1.81
CCDC7-213ENST00000639290 ALKBH8Q96BT7 664 aaKnown RBP3.73□□□□□ -1.81
CCDC7-213ENST00000639290 SNRNP40Q96DI7 357 aaKnown RBP3.73□□□□□ -1.81
CCDC7-213ENST00000639290 SLC6A18Q96N87 628 aa3.73□□□□□ -1.81
CCDC7-213ENST00000639290 MXRA8Q9BRK3 442 aa3.73□□□□□ -1.81
CCDC7-213ENST00000639290 ZPBPQ9BS86 351 aa3.73□□□□□ -1.81
CCDC7-213ENST00000639290 NFKBIZQ9BYH8 718 aa3.73□□□□□ -1.81
CCDC7-213ENST00000639290 ZNF696Q9H7X3 374 aa3.73□□□□□ -1.81
CCDC7-213ENST00000639290 RPF1Q9H9Y2 349 aaKnown RBP3.73□□□□□ -1.81
CCDC7-213ENST00000639290 IFT122Q9HBG6 1241 aa3.73□□□□□ -1.81
CCDC7-213ENST00000639290 EPB41L5Q9HCM4 733 aa3.73□□□□□ -1.81
CCDC7-213ENST00000639290 SLC38A7Q9NVC3 462 aa3.73□□□□□ -1.81
CCDC7-213ENST00000639290 BEX4Q9NWD9 120 aaPredicted RBP3.73□□□□□ -1.81
CCDC7-213ENST00000639290 DDX56Q9NY93 547 aaKnown RBP3.73□□□□□ -1.81
CCDC7-213ENST00000639290 RRN3Q9NYV6 651 aa3.73□□□□□ -1.81
CCDC7-213ENST00000639290 GCNT4Q9P109 453 aa3.73□□□□□ -1.81
CCDC7-213ENST00000639290 TRPS1Q9UHF7 1281 aa3.73□□□□□ -1.81
CCDC7-213ENST00000639290 TIMM13Q9Y5L4 95 aaPredicted RBP3.73□□□□□ -1.81
CCDC7-213ENST00000639290 BAZ2BQ9UIF8 2168 aaKnown RBP3.72□□□□□ -1.81
CCDC7-213ENST00000639290 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms