RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 FGFR2P21802 821 aa18.93■□□□□ 0.62
SCARB2-213ENST00000638680 SKIV2L2P42285 1042 aaKnown RBP18.93■□□□□ 0.62
SCARB2-213ENST00000638680 NFIAQ12857 509 aa18.93■□□□□ 0.62
SCARB2-213ENST00000638680 RRP1BQ14684 758 aaKnown RBP18.93■□□□□ 0.62
SCARB2-213ENST00000638680 DDR2Q16832 855 aa18.93■□□□□ 0.62
SCARB2-213ENST00000638680 CYP4Z1Q86W10 505 aa18.93■□□□□ 0.62
SCARB2-213ENST00000638680 ETNPPLQ8TBG4 499 aa18.93■□□□□ 0.62
SCARB2-213ENST00000638680 UTP15Q8TED0 518 aaKnown RBP18.93■□□□□ 0.62
SCARB2-213ENST00000638680 HTR3CQ8WXA8 447 aa18.93■□□□□ 0.62
SCARB2-213ENST00000638680 CELF6Q96J87 481 aaKnown RBP18.93■□□□□ 0.62
SCARB2-213ENST00000638680 REXO4Q9GZR2 422 aaKnown RBP18.93■□□□□ 0.62
SCARB2-213ENST00000638680 CNGB3Q9NQW8 809 aa18.93■□□□□ 0.62
SCARB2-213ENST00000638680 KCNK4Q9NYG8 393 aa18.93■□□□□ 0.62
SCARB2-213ENST00000638680 C2CD2Q9Y426 696 aa18.93■□□□□ 0.62
SCARB2-213ENST00000638680 OPLAHO14841 1288 aa18.93■□□□□ 0.62
SCARB2-213ENST00000638680 FBXO21O94952 628 aa18.93■□□□□ 0.62
SCARB2-213ENST00000638680 MAPTP10636 758 aaKnown RBP18.93■□□□□ 0.62
SCARB2-213ENST00000638680 OXCT1P55809 520 aa18.93■□□□□ 0.62
SCARB2-213ENST00000638680 RNF145Q96MT1 663 aa18.93■□□□□ 0.62
SCARB2-213ENST00000638680 MGAT4DA6NG13 374 aa18.93■□□□□ 0.62
SCARB2-213ENST00000638680 ATP5BP06576 529 aaKnown RBP18.93■□□□□ 0.62
SCARB2-213ENST00000638680 ALDH1A3P47895 512 aa18.93■□□□□ 0.62
SCARB2-213ENST00000638680 GANQ9H2C0 597 aa18.93■□□□□ 0.62
SCARB2-213ENST00000638680 PXMP2Q9NR77 195 aa18.93■□□□□ 0.62
SCARB2-213ENST00000638680 TBC1D13Q9NVG8 400 aa18.93■□□□□ 0.62
SCARB2-213ENST00000638680 RABGEF1Q9UJ41 708 aa18.93■□□□□ 0.62
SCARB2-213ENST00000638680 ATG7O95352 703 aa18.92■□□□□ 0.62
SCARB2-213ENST00000638680 ZSCAN5DPP0CG00 497 aa18.92■□□□□ 0.62
SCARB2-213ENST00000638680 PKNOX1P55347 436 aa18.92■□□□□ 0.62
SCARB2-213ENST00000638680 SLC30A10Q6XR72 485 aa18.92■□□□□ 0.62
SCARB2-213ENST00000638680 EID3Q8N140 333 aa18.92■□□□□ 0.62
SCARB2-213ENST00000638680 SALL1Q9NSC2 1324 aa18.92■□□□□ 0.62
SCARB2-213ENST00000638680 HS6ST1O60243 411 aa18.92■□□□□ 0.62
SCARB2-213ENST00000638680 MYBL2P10244 700 aa18.92■□□□□ 0.62
SCARB2-213ENST00000638680 YY1P25490 414 aa18.92■□□□□ 0.62
SCARB2-213ENST00000638680 GPC1P35052 558 aa18.92■□□□□ 0.62
SCARB2-213ENST00000638680 CAP2P40123 477 aa18.92■□□□□ 0.62
SCARB2-213ENST00000638680 MRPS22P82650 360 aaKnown RBP18.92■□□□□ 0.62
SCARB2-213ENST00000638680 CDH17Q12864 832 aa18.92■□□□□ 0.62
SCARB2-213ENST00000638680 ZNF484Q5JVG2 852 aa18.92■□□□□ 0.62
SCARB2-213ENST00000638680 BHLHE22Q8NFJ8 381 aaPredicted RBP18.92■□□□□ 0.62
SCARB2-213ENST00000638680 GMCL1Q96IK5 515 aa18.92■□□□□ 0.62
SCARB2-213ENST00000638680 KLHL3Q9UH77 587 aa18.92■□□□□ 0.62
SCARB2-213ENST00000638680 ZMYND8Q9ULU4 1186 aaPredicted RBP18.92■□□□□ 0.62
SCARB2-213ENST00000638680 CD163L1Q9NR16 1453 aa18.92■□□□□ 0.62
SCARB2-213ENST00000638680 GNG14A0A1W2PPG7 69 aa18.92■□□□□ 0.62
SCARB2-213ENST00000638680 ENDOD1O94919 500 aa18.92■□□□□ 0.62
SCARB2-213ENST00000638680 GSTM1P09488 218 aa18.92■□□□□ 0.62
SCARB2-213ENST00000638680 PCNAP12004 261 aa18.92■□□□□ 0.62
SCARB2-213ENST00000638680 FGFR3P22607 806 aa18.92■□□□□ 0.62
SCARB2-213ENST00000638680 FAM45BPQ6NSW5 357 aa18.92■□□□□ 0.62
SCARB2-213ENST00000638680 MAGED4Q96JG8 741 aa18.92■□□□□ 0.62
SCARB2-213ENST00000638680 NOL6Q9H6R4 1146 aaKnown RBP18.92■□□□□ 0.62
SCARB2-213ENST00000638680 MID1IP1Q9NPA3 183 aa18.92■□□□□ 0.62
SCARB2-213ENST00000638680 KRCC1Q9NPI7 259 aaPredicted RBP18.92■□□□□ 0.62
SCARB2-213ENST00000638680 CCDC167Q9P0B6 97 aa18.92■□□□□ 0.62
SCARB2-213ENST00000638680 CCDC154A6NI56 674 aa18.92■□□□□ 0.62
SCARB2-213ENST00000638680 FAM25AB3EWG3 89 aa18.92■□□□□ 0.62
SCARB2-213ENST00000638680 FAM25CB3EWG5 89 aa18.92■□□□□ 0.62
SCARB2-213ENST00000638680 FAM25GB3EWG6 89 aa18.92■□□□□ 0.62
SCARB2-213ENST00000638680 FAM86B2P0C5J1 330 aa18.92■□□□□ 0.62
SCARB2-213ENST00000638680 KCNJ2P63252 427 aa18.92■□□□□ 0.62
SCARB2-213ENST00000638680 CBWD6Q4V339 395 aa18.92■□□□□ 0.62
SCARB2-213ENST00000638680 CBWD3Q5JTY5 395 aa18.92■□□□□ 0.62
SCARB2-213ENST00000638680 CBWD5Q5RIA9 395 aa18.92■□□□□ 0.62
SCARB2-213ENST00000638680 FAM228AQ86W67 206 aa18.92■□□□□ 0.62
SCARB2-213ENST00000638680 IL17RBQ9NRM6 502 aa18.92■□□□□ 0.62
SCARB2-213ENST00000638680 TSPAN16Q9UKR8 245 aa18.92■□□□□ 0.62
SCARB2-213ENST00000638680 ANKRD6Q9Y2G4 727 aa18.92■□□□□ 0.62
SCARB2-213ENST00000638680 C17orf102A2RUQ5 167 aa18.92■□□□□ 0.62
SCARB2-213ENST00000638680 MAP3K13O43283 966 aa18.92■□□□□ 0.62
SCARB2-213ENST00000638680 KATNA1O75449 491 aa18.92■□□□□ 0.62
SCARB2-213ENST00000638680 TKTL1P51854 596 aa18.92■□□□□ 0.62
SCARB2-213ENST00000638680 GPRC5AQ8NFJ5 357 aa18.92■□□□□ 0.62
SCARB2-213ENST00000638680 VCPIP1Q96JH7 1222 aa18.92■□□□□ 0.62
SCARB2-213ENST00000638680 DEFB129Q9H1M3 183 aa18.92■□□□□ 0.62
SCARB2-213ENST00000638680 NCAM2O15394 837 aa18.91■□□□□ 0.62
SCARB2-213ENST00000638680 MICAL2O94851 1124 aa18.91■□□□□ 0.62
SCARB2-213ENST00000638680 POLD3Q15054 466 aaPredicted RBP18.91■□□□□ 0.62
SCARB2-213ENST00000638680 SLC45A4Q5BKX6 768 aa18.91■□□□□ 0.62
SCARB2-213ENST00000638680 DPY30Q9C005 99 aa18.91■□□□□ 0.62
SCARB2-213ENST00000638680 ELOVL6Q9H5J4 265 aa18.91■□□□□ 0.62
SCARB2-213ENST00000638680 BLOC1S4Q9NUP1 217 aa18.91■□□□□ 0.62
SCARB2-213ENST00000638680 MCM8Q9UJA3 840 aa18.91■□□□□ 0.62
SCARB2-213ENST00000638680 CSDE1O75534 798 aaKnown RBP18.91■□□□□ 0.62
SCARB2-213ENST00000638680 UNC5CO95185 931 aa18.91■□□□□ 0.62
SCARB2-213ENST00000638680 IFNA14P01570 189 aa18.91■□□□□ 0.62
SCARB2-213ENST00000638680 PRKAA2P54646 552 aa18.91■□□□□ 0.62
SCARB2-213ENST00000638680 STK32CQ86UX6 486 aa18.91■□□□□ 0.62
SCARB2-213ENST00000638680 SVOPQ8N4V2 548 aa18.91■□□□□ 0.62
SCARB2-213ENST00000638680 EIF1ADQ8N9N8 165 aaKnown RBP18.91■□□□□ 0.62
SCARB2-213ENST00000638680 FBXO32Q969P5 355 aa18.91■□□□□ 0.62
SCARB2-213ENST00000638680 DUSP12Q9UNI6 340 aa18.91■□□□□ 0.62
SCARB2-213ENST00000638680 B3GAT3O94766 335 aa18.91■□□□□ 0.62
SCARB2-213ENST00000638680 AMPD1P23109 780 aa18.91■□□□□ 0.62
SCARB2-213ENST00000638680 TPP2P29144 1249 aaPredicted RBP18.91■□□□□ 0.62
SCARB2-213ENST00000638680 GSSP48637 474 aa18.91■□□□□ 0.62
SCARB2-213ENST00000638680 AUHQ13825 339 aaKnown RBP18.91■□□□□ 0.62
SCARB2-213ENST00000638680 ZNF268Q14587 947 aaPredicted RBP18.91■□□□□ 0.62
SCARB2-213ENST00000638680 SLC9A5Q14940 896 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms