RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 LCLAT1Q6UWP7 414 aa19.29■□□□□ 0.68
CLN6-220ENST00000637450 TMPRSS6Q8IU80 811 aa19.29■□□□□ 0.68
CLN6-220ENST00000637450 RGL4Q8IZJ4 473 aa19.29■□□□□ 0.68
CLN6-220ENST00000637450 HDDC3Q8N4P3 179 aa19.29■□□□□ 0.68
CLN6-220ENST00000637450 EDEM1Q92611 657 aa19.29■□□□□ 0.68
CLN6-220ENST00000637450 TOE1Q96GM8 510 aaKnown RBP19.29■□□□□ 0.68
CLN6-220ENST00000637450 ABCC13Q9NSE7 274 aa19.29■□□□□ 0.68
CLN6-220ENST00000637450 CACNA1EQ15878 2313 aa19.28■□□□□ 0.68
CLN6-220ENST00000637450 SYNCRIPO60506 623 aaKnown RBP19.28■□□□□ 0.68
CLN6-220ENST00000637450 TOP3BO95985 862 aaKnown RBP19.28■□□□□ 0.68
CLN6-220ENST00000637450 SYPP08247 313 aa19.28■□□□□ 0.68
CLN6-220ENST00000637450 PAEPP09466 180 aa19.28■□□□□ 0.68
CLN6-220ENST00000637450 SPINK2P20155 84 aa19.28■□□□□ 0.68
CLN6-220ENST00000637450 HOXD9P28356 352 aaPredicted RBP19.28■□□□□ 0.68
CLN6-220ENST00000637450 WDR45BQ5MNZ6 344 aa19.28■□□□□ 0.68
CLN6-220ENST00000637450 SIX6OS1Q8N1H7 587 aa19.28■□□□□ 0.68
CLN6-220ENST00000637450 MINDY1Q8N5J2 469 aa19.28■□□□□ 0.68
CLN6-220ENST00000637450 SLC35F5Q8WV83 523 aa19.28■□□□□ 0.68
CLN6-220ENST00000637450 SORCS1Q8WY21 1168 aa19.28■□□□□ 0.68
CLN6-220ENST00000637450 TFAP2BQ92481 460 aa19.28■□□□□ 0.68
CLN6-220ENST00000637450 SIPA1Q96FS4 1042 aa19.28■□□□□ 0.68
CLN6-220ENST00000637450 DHTKD1Q96HY7 919 aaPredicted RBP19.28■□□□□ 0.68
CLN6-220ENST00000637450 CEP63Q96MT8 703 aa19.28■□□□□ 0.68
CLN6-220ENST00000637450 CIPCQ9C0C6 399 aa19.28■□□□□ 0.68
CLN6-220ENST00000637450 CNGB3Q9NQW8 809 aa19.28■□□□□ 0.68
CLN6-220ENST00000637450 SUSD2Q9UGT4 822 aa19.28■□□□□ 0.68
CLN6-220ENST00000637450 HOOK1Q9UJC3 728 aaKnown RBP19.28■□□□□ 0.68
CLN6-220ENST00000637450 PCNX2A6NKB5 2137 aa19.28■□□□□ 0.68
CLN6-220ENST00000637450 C1QTNF9BB2RNN3 333 aa19.27■□□□□ 0.68
CLN6-220ENST00000637450 KCNJ18B7U540 433 aa19.27■□□□□ 0.68
CLN6-220ENST00000637450 PSMA7O14818 248 aa19.27■□□□□ 0.68
CLN6-220ENST00000637450 TSPAN3O60637 253 aa19.27■□□□□ 0.68
CLN6-220ENST00000637450 GABBR2O75899 941 aa19.27■□□□□ 0.68
CLN6-220ENST00000637450 LATS1O95835 1130 aa19.27■□□□□ 0.68
CLN6-220ENST00000637450 C1QTNF9P0C862 333 aa19.27■□□□□ 0.68
CLN6-220ENST00000637450 NCAM1P13591 858 aa19.27■□□□□ 0.68
CLN6-220ENST00000637450 LCP1P13796 627 aa19.27■□□□□ 0.68
CLN6-220ENST00000637450 MAOBP27338 520 aa19.27■□□□□ 0.68
CLN6-220ENST00000637450 TPMTP51580 245 aa19.27■□□□□ 0.68
CLN6-220ENST00000637450 COPAP53621 1224 aa19.27■□□□□ 0.68
CLN6-220ENST00000637450 DAOAP59103 153 aa19.27■□□□□ 0.68
CLN6-220ENST00000637450 ZNF445P59923 1031 aa19.27■□□□□ 0.68
CLN6-220ENST00000637450 STIM1Q13586 685 aa19.27■□□□□ 0.68
CLN6-220ENST00000637450 CNGA2Q16280 664 aa19.27■□□□□ 0.68
CLN6-220ENST00000637450 ADGRF1Q5T601 910 aa19.27■□□□□ 0.68
CLN6-220ENST00000637450 PMF1Q6P1K2 205 aa19.27■□□□□ 0.68
CLN6-220ENST00000637450 TMEM270Q6UE05 265 aa19.27■□□□□ 0.68
CLN6-220ENST00000637450 UNQ6494/PRO21346Q6UXR6 183 aa19.27■□□□□ 0.68
CLN6-220ENST00000637450 ELOA2Q8IYF1 753 aaPredicted RBP19.27■□□□□ 0.68
CLN6-220ENST00000637450 CADM4Q8NFZ8 388 aa19.27■□□□□ 0.68
CLN6-220ENST00000637450 OR2I1PQ8NGU4 316 aa19.27■□□□□ 0.68
CLN6-220ENST00000637450 DNASE2BQ8WZ79 361 aa19.27■□□□□ 0.68
CLN6-220ENST00000637450 TMA16Q96EY4 203 aaKnown RBP19.27■□□□□ 0.68
CLN6-220ENST00000637450 ZSWIM1Q9BR11 485 aa19.27■□□□□ 0.68
CLN6-220ENST00000637450 DNAAF2Q9NVR5 837 aaKnown RBP19.27■□□□□ 0.68
CLN6-220ENST00000637450 NFE2L3Q9Y4A8 694 aa19.27■□□□□ 0.68
CLN6-220ENST00000637450 RNF225M0QZC1 329 aaPredicted RBP19.26■□□□□ 0.67
CLN6-220ENST00000637450 IGLV3-19P01714 112 aa19.26■□□□□ 0.67
CLN6-220ENST00000637450 EPHX1P07099 455 aa19.26■□□□□ 0.67
CLN6-220ENST00000637450 CD59P13987 128 aa19.26■□□□□ 0.67
CLN6-220ENST00000637450 GNSP15586 552 aa19.26■□□□□ 0.67
CLN6-220ENST00000637450 CD44P16070 742 aaKnown RBP19.26■□□□□ 0.67
CLN6-220ENST00000637450 PRKCHP24723 683 aa19.26■□□□□ 0.67
CLN6-220ENST00000637450 HLA-FP30511 346 aa19.26■□□□□ 0.67
CLN6-220ENST00000637450 OXTRP30559 389 aa19.26■□□□□ 0.67
CLN6-220ENST00000637450 NUCB2P80303 420 aa19.26■□□□□ 0.67
CLN6-220ENST00000637450 PLEKHG6Q3KR16 790 aa19.26■□□□□ 0.67
CLN6-220ENST00000637450 ISM2Q6H9L7 571 aa19.26■□□□□ 0.67
CLN6-220ENST00000637450 LMO3Q8TAP4 145 aa19.26■□□□□ 0.67
CLN6-220ENST00000637450 PRCCQ92733 491 aaPredicted RBP19.26■□□□□ 0.67
CLN6-220ENST00000637450 NT5C1BQ96P26 610 aa19.26■□□□□ 0.67
CLN6-220ENST00000637450 SCNM1Q9BWG6 230 aa19.26■□□□□ 0.67
CLN6-220ENST00000637450 GPR174Q9BXC1 333 aa19.26■□□□□ 0.67
CLN6-220ENST00000637450 PCDHB4Q9Y5E5 795 aa19.26■□□□□ 0.67
CLN6-220ENST00000637450 CHD6Q8TD26 2715 aa19.25■□□□□ 0.67
CLN6-220ENST00000637450 SPAARA0A1B0GVQ0 90 aa19.25■□□□□ 0.67
CLN6-220ENST00000637450 MSI1O43347 362 aaKnown RBP19.25■□□□□ 0.67
CLN6-220ENST00000637450 GJB3O75712 270 aa19.25■□□□□ 0.67
CLN6-220ENST00000637450 RGS7P49802 495 aa19.25■□□□□ 0.67
CLN6-220ENST00000637450 SIM1P81133 766 aaPredicted RBP19.25■□□□□ 0.67
CLN6-220ENST00000637450 ARID5AQ03989 594 aa19.25■□□□□ 0.67
CLN6-220ENST00000637450 SLC14A1Q13336 389 aa19.25■□□□□ 0.67
CLN6-220ENST00000637450 CCDC40Q4G0X9 1142 aa19.25■□□□□ 0.67
CLN6-220ENST00000637450 MSANTD2Q6P1R3 559 aa19.25■□□□□ 0.67
CLN6-220ENST00000637450 SERPINA13PQ6UXR4 307 aa19.25■□□□□ 0.67
CLN6-220ENST00000637450 KIAA0907Q7Z7F0 614 aaPredicted RBP19.25■□□□□ 0.67
CLN6-220ENST00000637450 IRGQQ8WZA9 623 aa19.25■□□□□ 0.67
CLN6-220ENST00000637450 KAT5Q92993 513 aa19.25■□□□□ 0.67
CLN6-220ENST00000637450 TMEM121BQ9BXQ6 578 aaPredicted RBP19.25■□□□□ 0.67
CLN6-220ENST00000637450 ADAM33Q9BZ11 813 aa19.25■□□□□ 0.67
CLN6-220ENST00000637450 MAN1B1Q9UKM7 699 aa19.25■□□□□ 0.67
CLN6-220ENST00000637450 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.25■□□□□ 0.67
CLN6-220ENST00000637450 METTL12A8MUP2 240 aa19.24■□□□□ 0.67
CLN6-220ENST00000637450 P4HA2O15460 535 aa19.24■□□□□ 0.67
CLN6-220ENST00000637450 ACADMP11310 421 aa19.24■□□□□ 0.67
CLN6-220ENST00000637450 PPP1R2P41236 205 aa19.24■□□□□ 0.67
CLN6-220ENST00000637450 CETN1Q12798 172 aa19.24■□□□□ 0.67
CLN6-220ENST00000637450 STILQ15468 1287 aa19.24■□□□□ 0.67
CLN6-220ENST00000637450 TTI2Q6NXR4 508 aa19.24■□□□□ 0.67
CLN6-220ENST00000637450 PPM1KQ8N3J5 372 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms