RNA–Protein interactions for RNA: ENST00000637397.1

CLN5-218, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 5,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-218ENST00000637397 FAM83AQ86UY5 434 aa16.28■□□□□ 0.2
CLN5-218ENST00000637397 CPNE8Q86YQ8 564 aa16.28■□□□□ 0.2
CLN5-218ENST00000637397 HELQQ8TDG4 1101 aa16.28■□□□□ 0.2
CLN5-218ENST00000637397 FAM162AQ96A26 154 aa16.28■□□□□ 0.2
CLN5-218ENST00000637397 XPNPEP3Q9NQH7 507 aa16.28■□□□□ 0.2
CLN5-218ENST00000637397 RIC8BQ9NVN3 520 aa16.28■□□□□ 0.2
CLN5-218ENST00000637397 CCDC167Q9P0B6 97 aa16.28■□□□□ 0.2
CLN5-218ENST00000637397 ASTN2O75129 1339 aaPredicted RBP16.28■□□□□ 0.2
CLN5-218ENST00000637397 PIGNO95427 931 aa16.27■□□□□ 0.2
CLN5-218ENST00000637397 MPOP05164 745 aa16.27■□□□□ 0.2
CLN5-218ENST00000637397 C6orf222P0C671 652 aaPredicted RBP16.27■□□□□ 0.2
CLN5-218ENST00000637397 CCDC15Q0P6D6 951 aa16.27■□□□□ 0.2
CLN5-218ENST00000637397 TBCELQ5QJ74 424 aa16.27■□□□□ 0.2
CLN5-218ENST00000637397 KIAA2013Q8IYS2 634 aa16.27■□□□□ 0.2
CLN5-218ENST00000637397 THUMPD3Q9BV44 507 aaKnown RBP16.27■□□□□ 0.2
CLN5-218ENST00000637397 FICDQ9BVA6 458 aa16.27■□□□□ 0.2
CLN5-218ENST00000637397 SEMA6AQ9H2E6 1030 aa16.27■□□□□ 0.2
CLN5-218ENST00000637397 RNPEPQ9H4A4 650 aa16.27■□□□□ 0.2
CLN5-218ENST00000637397 STXBP5LQ9Y2K9 1186 aa16.27■□□□□ 0.2
CLN5-218ENST00000637397 TMEM191CA6NGB0 347 aa16.27■□□□□ 0.2
CLN5-218ENST00000637397 PEX1O43933 1283 aa16.27■□□□□ 0.2
CLN5-218ENST00000637397 DPEP1P16444 411 aa16.27■□□□□ 0.2
CLN5-218ENST00000637397 TNFSF9P41273 254 aa16.27■□□□□ 0.2
CLN5-218ENST00000637397 NR2C2P49116 596 aa16.27■□□□□ 0.2
CLN5-218ENST00000637397 NRF1Q16656 503 aa16.27■□□□□ 0.2
CLN5-218ENST00000637397 TRIM16LQ309B1 348 aa16.27■□□□□ 0.2
CLN5-218ENST00000637397 MFSD14AQ96MC6 490 aa16.27■□□□□ 0.2
CLN5-218ENST00000637397 APBA2Q99767 749 aa16.27■□□□□ 0.2
CLN5-218ENST00000637397 CPNE1Q99829 537 aa16.27■□□□□ 0.2
CLN5-218ENST00000637397 TRIM54Q9BYV2 358 aa16.27■□□□□ 0.2
CLN5-218ENST00000637397 SORCS3Q9UPU3 1222 aa16.27■□□□□ 0.2
CLN5-218ENST00000637397 PRR5-ARHGAP8B1AHC4 643 aa16.27■□□□□ 0.2
CLN5-218ENST00000637397 DAB1O75553 588 aa16.27■□□□□ 0.2
CLN5-218ENST00000637397 FKBP9O95302 570 aa16.27■□□□□ 0.2
CLN5-218ENST00000637397 NEK2P51955 445 aa16.27■□□□□ 0.2
CLN5-218ENST00000637397 MAP3K7CLP57077 242 aa16.27■□□□□ 0.2
CLN5-218ENST00000637397 ARHGAP8P85298 464 aa16.27■□□□□ 0.2
CLN5-218ENST00000637397 SLC6A3Q01959 620 aa16.27■□□□□ 0.2
CLN5-218ENST00000637397 FKBP9P1Q75LS8 142 aa16.27■□□□□ 0.2
CLN5-218ENST00000637397 DHDDSQ86SQ9 333 aa16.27■□□□□ 0.2
CLN5-218ENST00000637397 RMND5BQ96G75 393 aaPredicted RBP16.27■□□□□ 0.2
CLN5-218ENST00000637397 RNF157Q96PX1 679 aa16.27■□□□□ 0.2
CLN5-218ENST00000637397 XRN1Q8IZH2 1706 aaKnown RBP16.27■□□□□ 0.19
CLN5-218ENST00000637397 PRPF4O43172 522 aaKnown RBP eCLIP16.27■□□□□ 0.19
CLN5-218ENST00000637397 PHGDHO43175 533 aaKnown RBP16.27■□□□□ 0.19
CLN5-218ENST00000637397 CDK7P50613 346 aa16.27■□□□□ 0.19
CLN5-218ENST00000637397 NAGLUP54802 743 aa16.27■□□□□ 0.19
CLN5-218ENST00000637397 CCDC81Q6ZN84 652 aa16.27■□□□□ 0.19
CLN5-218ENST00000637397 TMC7Q7Z402 723 aa16.27■□□□□ 0.19
CLN5-218ENST00000637397 MICU2Q8IYU8 434 aa16.27■□□□□ 0.19
CLN5-218ENST00000637397 GPRC5DQ9NZD1 345 aa16.27■□□□□ 0.19
CLN5-218ENST00000637397 SLC30A1Q9Y6M5 507 aa16.27■□□□□ 0.19
CLN5-218ENST00000637397 CLK2P49760 499 aaKnown RBP16.26■□□□□ 0.19
CLN5-218ENST00000637397 NFYCQ13952 458 aa16.26■□□□□ 0.19
CLN5-218ENST00000637397 ZFP1Q6P2D0 407 aa16.26■□□□□ 0.19
CLN5-218ENST00000637397 PTF1AQ7RTS3 328 aa16.26■□□□□ 0.19
CLN5-218ENST00000637397 ADGRF2Q8IZF7 708 aa16.26■□□□□ 0.19
CLN5-218ENST00000637397 GSTCDQ8NEC7 633 aa16.26■□□□□ 0.19
CLN5-218ENST00000637397 RNF217Q8TC41 542 aa16.26■□□□□ 0.19
CLN5-218ENST00000637397 ZNF333Q96JL9 665 aa16.26■□□□□ 0.19
CLN5-218ENST00000637397 PIF1Q9H611 641 aa16.26■□□□□ 0.19
CLN5-218ENST00000637397 TRPC7Q9HCX4 862 aa16.26■□□□□ 0.19
CLN5-218ENST00000637397 NCF1BA6NI72 391 aaPredicted RBP16.26■□□□□ 0.19
CLN5-218ENST00000637397 NCF1CA8MVU1 366 aaPredicted RBP16.26■□□□□ 0.19
CLN5-218ENST00000637397 VAPBO95292 243 aa16.26■□□□□ 0.19
CLN5-218ENST00000637397 F9P00740 461 aa16.26■□□□□ 0.19
CLN5-218ENST00000637397 NCF1P14598 390 aaPredicted RBP16.26■□□□□ 0.19
CLN5-218ENST00000637397 ETS2P15036 469 aa16.26■□□□□ 0.19
CLN5-218ENST00000637397 POU4F1Q01851 419 aa16.26■□□□□ 0.19
CLN5-218ENST00000637397 ZNF484Q5JVG2 852 aa16.26■□□□□ 0.19
CLN5-218ENST00000637397 CYP4X1Q8N118 509 aa16.26■□□□□ 0.19
CLN5-218ENST00000637397 ADAM32Q8TC27 787 aa16.26■□□□□ 0.19
CLN5-218ENST00000637397 RIMBP3CA6NJZ7 1639 aa16.26■□□□□ 0.19
CLN5-218ENST00000637397 RIMBP3BA6NNM3 1639 aa16.26■□□□□ 0.19
CLN5-218ENST00000637397 RIMBP3Q9UFD9 1639 aa16.26■□□□□ 0.19
CLN5-218ENST00000637397 ALDH1A3P47895 512 aa16.26■□□□□ 0.19
CLN5-218ENST00000637397 CLK1P49759 484 aaKnown RBP16.26■□□□□ 0.19
CLN5-218ENST00000637397 PLK1P53350 603 aa16.26■□□□□ 0.19
CLN5-218ENST00000637397 CXCL9Q07325 125 aa16.26■□□□□ 0.19
CLN5-218ENST00000637397 C16orf72Q14CZ0 275 aa16.26■□□□□ 0.19
CLN5-218ENST00000637397 MARK2Q7KZI7 788 aaKnown RBP16.26■□□□□ 0.19
CLN5-218ENST00000637397 ITGA11Q9UKX5 1188 aa16.26■□□□□ 0.19
CLN5-218ENST00000637397 TRUB2O95900 331 aaKnown RBP16.26■□□□□ 0.19
CLN5-218ENST00000637397 INSRRP14616 1297 aa16.26■□□□□ 0.19
CLN5-218ENST00000637397 MMP8P22894 467 aa16.26■□□□□ 0.19
CLN5-218ENST00000637397 TKTL1P51854 596 aa16.26■□□□□ 0.19
CLN5-218ENST00000637397 ZNF143P52747 638 aaPredicted RBP16.26■□□□□ 0.19
CLN5-218ENST00000637397 NUP107P57740 925 aa16.26■□□□□ 0.19
CLN5-218ENST00000637397 ADIGQ0VDE8 80 aa16.26■□□□□ 0.19
CLN5-218ENST00000637397 SLC35G1Q2M3R5 365 aa16.26■□□□□ 0.19
CLN5-218ENST00000637397 FBXO47Q5MNV8 452 aa16.26■□□□□ 0.19
CLN5-218ENST00000637397 RNF220Q5VTB9 566 aa16.26■□□□□ 0.19
CLN5-218ENST00000637397 DEFB106AQ8N104 65 aa16.26■□□□□ 0.19
CLN5-218ENST00000637397 PCDH20Q8N6Y1 951 aaKnown RBP16.26■□□□□ 0.19
CLN5-218ENST00000637397 JOSD2Q8TAC2 188 aa16.26■□□□□ 0.19
CLN5-218ENST00000637397 ZFRQ96KR1 1074 aaKnown RBP16.26■□□□□ 0.19
CLN5-218ENST00000637397 ASB7Q9H672 318 aa16.26■□□□□ 0.19
CLN5-218ENST00000637397 SLC38A7Q9NVC3 462 aa16.26■□□□□ 0.19
CLN5-218ENST00000637397 TMEM59LQ9UK28 342 aa16.26■□□□□ 0.19
CLN5-218ENST00000637397 PKP3Q9Y446 797 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms