RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 FAM149B1Q96BN6 582 aa7.01□□□□□ -1.29
UPF3B-205ENST00000636792 PLD4Q96BZ4 506 aa7.01□□□□□ -1.29
UPF3B-205ENST00000636792 ACSF2Q96CM8 615 aaPredicted RBP7.01□□□□□ -1.29
UPF3B-205ENST00000636792 OTUB2Q96DC9 234 aa7.01□□□□□ -1.29
UPF3B-205ENST00000636792 TRIM44Q96DX7 344 aaPredicted RBP7.01□□□□□ -1.29
UPF3B-205ENST00000636792 FAM161BQ96MY7 647 aa7.01□□□□□ -1.29
UPF3B-205ENST00000636792 CORO1BQ9BR76 489 aa7.01□□□□□ -1.29
UPF3B-205ENST00000636792 CNPY3Q9BT09 278 aa7.01□□□□□ -1.29
UPF3B-205ENST00000636792 DDX23Q9BUQ8 820 aaKnown RBP7.01□□□□□ -1.29
UPF3B-205ENST00000636792 DCLK3Q9C098 648 aa7.01□□□□□ -1.29
UPF3B-205ENST00000636792 THAP2Q9H0W7 228 aa7.01□□□□□ -1.29
UPF3B-205ENST00000636792 IGFLR1Q9H665 355 aa7.01□□□□□ -1.29
UPF3B-205ENST00000636792 RETREG1Q9H6L5 497 aa7.01□□□□□ -1.29
UPF3B-205ENST00000636792 TASP1Q9H6P5 420 aa7.01□□□□□ -1.29
UPF3B-205ENST00000636792 SPTLC3Q9NUV7 552 aa7.01□□□□□ -1.29
UPF3B-205ENST00000636792 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.01□□□□□ -1.29
UPF3B-205ENST00000636792 GMIPQ9P107 970 aa7.01□□□□□ -1.29
UPF3B-205ENST00000636792 DNMT3BQ9UBC3 853 aaKnown RBP7.01□□□□□ -1.29
UPF3B-205ENST00000636792 MYO1AQ9UBC5 1043 aa7.01□□□□□ -1.29
UPF3B-205ENST00000636792 PRKAG3Q9UGI9 489 aa7.01□□□□□ -1.29
UPF3B-205ENST00000636792 IP6K2Q9UHH9 426 aa7.01□□□□□ -1.29
UPF3B-205ENST00000636792 TMEM59LQ9UK28 342 aa7.01□□□□□ -1.29
UPF3B-205ENST00000636792 ARHGAP26Q9UNA1 814 aa7.01□□□□□ -1.29
UPF3B-205ENST00000636792 MAGED2Q9UNF1 606 aaPredicted RBP7.01□□□□□ -1.29
UPF3B-205ENST00000636792 ZNF510Q9Y2H8 683 aa7.01□□□□□ -1.29
UPF3B-205ENST00000636792 NR2E1Q9Y466 385 aa7.01□□□□□ -1.29
UPF3B-205ENST00000636792 PCDHA13Q9Y5I0 950 aa7.01□□□□□ -1.29
UPF3B-205ENST00000636792 DOCK6Q96HP0 2047 aa7.01□□□□□ -1.29
UPF3B-205ENST00000636792 TMEM191CA6NGB0 347 aa7□□□□□ -1.29
UPF3B-205ENST00000636792 YJEFN3A6XGL0 299 aa7□□□□□ -1.29
UPF3B-205ENST00000636792 E7ENQ6 273 aa7□□□□□ -1.29
UPF3B-205ENST00000636792 MYO1FO00160 1098 aa7□□□□□ -1.29
UPF3B-205ENST00000636792 ZNF263O14978 683 aa7□□□□□ -1.29
UPF3B-205ENST00000636792 LINC01565O15544 149 aa7□□□□□ -1.29
UPF3B-205ENST00000636792 MBTPS2O43462 519 aa7□□□□□ -1.29
UPF3B-205ENST00000636792 SOAT2O75908 522 aa7□□□□□ -1.29
UPF3B-205ENST00000636792 RNF8O76064 485 aa7□□□□□ -1.29
UPF3B-205ENST00000636792 ENDOD1O94919 500 aa7□□□□□ -1.29
UPF3B-205ENST00000636792 CSPG5O95196 566 aa7□□□□□ -1.29
UPF3B-205ENST00000636792 CALCAP01258 141 aa7□□□□□ -1.29
UPF3B-205ENST00000636792 IGLV3-27P01718 113 aa7□□□□□ -1.29
UPF3B-205ENST00000636792 SPATA31D3P0C874 917 aa7□□□□□ -1.29
UPF3B-205ENST00000636792 NCAM1P13591 858 aa7□□□□□ -1.29
UPF3B-205ENST00000636792 RARGP13631 454 aa7□□□□□ -1.29
UPF3B-205ENST00000636792 ABCB4P21439 1286 aa7□□□□□ -1.29
UPF3B-205ENST00000636792 GPD1P21695 349 aa7□□□□□ -1.29
UPF3B-205ENST00000636792 HTR7P34969 479 aa7□□□□□ -1.29
UPF3B-205ENST00000636792 GTF2F1P35269 517 aaKnown RBP eCLIP7□□□□□ -1.29
UPF3B-205ENST00000636792 PCK1P35558 622 aa7□□□□□ -1.29
UPF3B-205ENST00000636792 AVPR1AP37288 418 aa7□□□□□ -1.29
UPF3B-205ENST00000636792 USP4Q13107 963 aa7□□□□□ -1.29
UPF3B-205ENST00000636792 PPP2R5DQ14738 602 aa7□□□□□ -1.29
UPF3B-205ENST00000636792 SMAD2Q15796 467 aaKnown RBP7□□□□□ -1.29
UPF3B-205ENST00000636792 TMC5Q6UXY8 1006 aa7□□□□□ -1.29
UPF3B-205ENST00000636792 SPATA31D4Q6ZUB0 917 aa7□□□□□ -1.29
UPF3B-205ENST00000636792 SND1Q7KZF4 910 aaKnown RBP eCLIP7□□□□□ -1.29
UPF3B-205ENST00000636792 Q7L0L9 218 aa7□□□□□ -1.29
UPF3B-205ENST00000636792 RSRC2Q7L4I2 434 aaKnown RBP7□□□□□ -1.29
UPF3B-205ENST00000636792 GRASPQ7Z6J2 395 aaPredicted RBP7□□□□□ -1.29
UPF3B-205ENST00000636792 SCD5Q86SK9 330 aa7□□□□□ -1.29
UPF3B-205ENST00000636792 TMEM150AQ86TG1 271 aa7□□□□□ -1.29
UPF3B-205ENST00000636792 UNC45BQ8IWX7 931 aa7□□□□□ -1.29
UPF3B-205ENST00000636792 SYCE1Q8N0S2 351 aa7□□□□□ -1.29
UPF3B-205ENST00000636792 ZNF557Q8N988 423 aaPredicted RBP7□□□□□ -1.29
UPF3B-205ENST00000636792 TRIM58Q8NG06 486 aa7□□□□□ -1.29
UPF3B-205ENST00000636792 MAFAQ8NHW3 353 aaPredicted RBP7□□□□□ -1.29
UPF3B-205ENST00000636792 SHKBP1Q8TBC3 707 aa7□□□□□ -1.29
UPF3B-205ENST00000636792 FEZF2Q8TBJ5 459 aa7□□□□□ -1.29
UPF3B-205ENST00000636792 ZNF564Q8TBZ8 553 aaPredicted RBP7□□□□□ -1.29
UPF3B-205ENST00000636792 DEPDC1BQ8WUY9 529 aa7□□□□□ -1.29
UPF3B-205ENST00000636792 CENPIQ92674 756 aaPredicted RBP7□□□□□ -1.29
UPF3B-205ENST00000636792 AZIN2Q96A70 460 aa7□□□□□ -1.29
UPF3B-205ENST00000636792 NTAN1Q96AB6 310 aa7□□□□□ -1.29
UPF3B-205ENST00000636792 TBCBQ99426 244 aa7□□□□□ -1.29
UPF3B-205ENST00000636792 NPY6RQ99463 290 aa7□□□□□ -1.29
UPF3B-205ENST00000636792 PHF7Q9BWX1 381 aaPredicted RBP7□□□□□ -1.29
UPF3B-205ENST00000636792 ATXN3LQ9H3M9 355 aa7□□□□□ -1.29
UPF3B-205ENST00000636792 ZNF334Q9HCZ1 680 aaPredicted RBP7□□□□□ -1.29
UPF3B-205ENST00000636792 METTL5Q9NRN9 209 aaKnown RBP7□□□□□ -1.29
UPF3B-205ENST00000636792 TAS2R14Q9NYV8 317 aa7□□□□□ -1.29
UPF3B-205ENST00000636792 THEGQ9P2T0 379 aa7□□□□□ -1.29
UPF3B-205ENST00000636792 EPS15L1Q9UBC2 864 aa7□□□□□ -1.29
UPF3B-205ENST00000636792 ANAPC7Q9UJX3 599 aa7□□□□□ -1.29
UPF3B-205ENST00000636792 GDF2Q9UK05 429 aaPredicted RBP7□□□□□ -1.29
UPF3B-205ENST00000636792 CDH7Q9ULB5 785 aa7□□□□□ -1.29
UPF3B-205ENST00000636792 TLR6Q9Y2C9 796 aa7□□□□□ -1.29
UPF3B-205ENST00000636792 MRPS23Q9Y3D9 190 aaKnown RBP7□□□□□ -1.29
UPF3B-205ENST00000636792 USP15Q9Y4E8 981 aaPredicted RBP7□□□□□ -1.29
UPF3B-205ENST00000636792 DOCK4Q8N1I0 1966 aa6.99□□□□□ -1.29
UPF3B-205ENST00000636792 A0A1W2PQH9 124 aa6.99□□□□□ -1.29
UPF3B-205ENST00000636792 A0A1W2PRU2 124 aa6.99□□□□□ -1.29
UPF3B-205ENST00000636792 E2F8A0AVK6 867 aa6.99□□□□□ -1.29
UPF3B-205ENST00000636792 TMCO5BA8MYB1 307 aa6.99□□□□□ -1.29
UPF3B-205ENST00000636792 ZNF487B1APH4 448 aa6.99□□□□□ -1.29
UPF3B-205ENST00000636792 SLC9A3R1O14745 358 aaPredicted RBP6.99□□□□□ -1.29
UPF3B-205ENST00000636792 MDM4O15151 490 aa6.99□□□□□ -1.29
UPF3B-205ENST00000636792 COCHO43405 550 aa6.99□□□□□ -1.29
UPF3B-205ENST00000636792 APOEP02649 317 aa6.99□□□□□ -1.29
UPF3B-205ENST00000636792 TUBB4AP04350 444 aa6.99□□□□□ -1.29
UPF3B-205ENST00000636792 CKMP06732 381 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms