RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 CXorf40BQ96DE9 158 aa18.27■□□□□ 0.51
CACNA1A-227ENST00000636549 MRPL17Q9NRX2 175 aaKnown RBP18.27■□□□□ 0.51
CACNA1A-227ENST00000636549 SPATA20Q8TB22 786 aa18.26■□□□□ 0.51
CACNA1A-227ENST00000636549 ATG10Q9H0Y0 220 aa18.26■□□□□ 0.51
CACNA1A-227ENST00000636549 RIBC2Q9H4K1 309 aa18.26■□□□□ 0.51
CACNA1A-227ENST00000636549 ARHGEF12Q9NZN5 1544 aa18.26■□□□□ 0.51
CACNA1A-227ENST00000636549 GRID2IPA4D2P6 1211 aa18.26■□□□□ 0.51
CACNA1A-227ENST00000636549 CCL16O15467 120 aa18.26■□□□□ 0.51
CACNA1A-227ENST00000636549 SNUPNO95149 360 aaKnown RBP18.26■□□□□ 0.51
CACNA1A-227ENST00000636549 CYP4F2P78329 520 aa18.26■□□□□ 0.51
CACNA1A-227ENST00000636549 CYP4F3Q08477 520 aa18.26■□□□□ 0.51
CACNA1A-227ENST00000636549 ZC3H7AQ8IWR0 971 aaKnown RBP18.26■□□□□ 0.51
CACNA1A-227ENST00000636549 LNX2Q8N448 690 aa18.26■□□□□ 0.51
CACNA1A-227ENST00000636549 KRT35Q92764 455 aa18.26■□□□□ 0.51
CACNA1A-227ENST00000636549 CBWD1Q9BRT8 395 aa18.26■□□□□ 0.51
CACNA1A-227ENST00000636549 GRIP2Q9C0E4 1043 aa18.26■□□□□ 0.51
CACNA1A-227ENST00000636549 RBM22Q9NW64 420 aaKnown RBP eCLIP18.26■□□□□ 0.51
CACNA1A-227ENST00000636549 GRID1Q9ULK0 1009 aa18.26■□□□□ 0.51
CACNA1A-227ENST00000636549 SLC37A4O43826 429 aa18.26■□□□□ 0.51
CACNA1A-227ENST00000636549 XYLBO75191 536 aa18.26■□□□□ 0.51
CACNA1A-227ENST00000636549 SCNN1AP37088 669 aa18.26■□□□□ 0.51
CACNA1A-227ENST00000636549 DEFA1P59665 94 aa18.26■□□□□ 0.51
CACNA1A-227ENST00000636549 DEFA3P59666 94 aa18.26■□□□□ 0.51
CACNA1A-227ENST00000636549 FNDC5Q8NAU1 212 aa18.26■□□□□ 0.51
CACNA1A-227ENST00000636549 GPR156Q8NFN8 814 aa18.26■□□□□ 0.51
CACNA1A-227ENST00000636549 FAM120BQ96EK7 910 aaKnown RBP18.26■□□□□ 0.51
CACNA1A-227ENST00000636549 TM6SF2Q9BZW4 377 aa18.26■□□□□ 0.51
CACNA1A-227ENST00000636549 COG5Q9UP83 839 aa18.26■□□□□ 0.51
CACNA1A-227ENST00000636549 SESN1Q9Y6P5 492 aa18.26■□□□□ 0.51
CACNA1A-227ENST00000636549 TMEM120BA0PK00 339 aa18.26■□□□□ 0.51
CACNA1A-227ENST00000636549 ERCC2P18074 760 aa18.26■□□□□ 0.51
CACNA1A-227ENST00000636549 ITGADQ13349 1161 aa18.26■□□□□ 0.51
CACNA1A-227ENST00000636549 ACAP2Q15057 778 aa18.26■□□□□ 0.51
CACNA1A-227ENST00000636549 AASDHQ4L235 1098 aaPredicted RBP18.26■□□□□ 0.51
CACNA1A-227ENST00000636549 RASGRP2Q7LDG7 609 aa18.26■□□□□ 0.51
CACNA1A-227ENST00000636549 NETO2Q8NC67 525 aa18.26■□□□□ 0.51
CACNA1A-227ENST00000636549 RBM12Q9NTZ6 932 aaKnown RBP18.26■□□□□ 0.51
CACNA1A-227ENST00000636549 CLEC4AQ9UMR7 237 aa18.26■□□□□ 0.51
CACNA1A-227ENST00000636549 USP18Q9UMW8 372 aa18.26■□□□□ 0.51
CACNA1A-227ENST00000636549 A0A1B0GW55 424 aa18.26■□□□□ 0.51
CACNA1A-227ENST00000636549 PRODHO43272 600 aa18.26■□□□□ 0.51
CACNA1A-227ENST00000636549 DUX4L2P0CJ85 424 aa18.26■□□□□ 0.51
CACNA1A-227ENST00000636549 DUX4L3P0CJ86 424 aa18.26■□□□□ 0.51
CACNA1A-227ENST00000636549 DUX4L4P0CJ87 422 aa18.26■□□□□ 0.51
CACNA1A-227ENST00000636549 DUX4L5P0CJ88 424 aa18.26■□□□□ 0.51
CACNA1A-227ENST00000636549 DUX4L6P0CJ89 424 aa18.26■□□□□ 0.51
CACNA1A-227ENST00000636549 DUX4L7P0CJ90 424 aa18.26■□□□□ 0.51
CACNA1A-227ENST00000636549 SERPINB9P50453 376 aa18.26■□□□□ 0.51
CACNA1A-227ENST00000636549 SMU1Q2TAY7 513 aa18.26■□□□□ 0.51
CACNA1A-227ENST00000636549 COLGALT1Q8NBJ5 622 aa18.26■□□□□ 0.51
CACNA1A-227ENST00000636549 WDR35Q9P2L0 1181 aa18.26■□□□□ 0.51
CACNA1A-227ENST00000636549 DUX4Q9UBX2 424 aa18.26■□□□□ 0.51
CACNA1A-227ENST00000636549 RPL4P36578 427 aaKnown RBP18.25■□□□□ 0.51
CACNA1A-227ENST00000636549 PNPLA4P41247 253 aa18.25■□□□□ 0.51
CACNA1A-227ENST00000636549 ADCYAP1R1P41586 468 aa18.25■□□□□ 0.51
CACNA1A-227ENST00000636549 CRATP43155 626 aa18.25■□□□□ 0.51
CACNA1A-227ENST00000636549 CASP9P55211 416 aa18.25■□□□□ 0.51
CACNA1A-227ENST00000636549 ABRQ12979 859 aa18.25■□□□□ 0.51
CACNA1A-227ENST00000636549 C7orf61Q8IZ16 206 aa18.25■□□□□ 0.51
CACNA1A-227ENST00000636549 CYP4Z2PQ8N1L4 340 aa18.25■□□□□ 0.51
CACNA1A-227ENST00000636549 MAML3Q96JK9 1138 aa18.25■□□□□ 0.51
CACNA1A-227ENST00000636549 ARF4P18085 180 aaPredicted RBP18.25■□□□□ 0.51
CACNA1A-227ENST00000636549 ADORA2AP29274 412 aa18.25■□□□□ 0.51
CACNA1A-227ENST00000636549 SUZ12Q15022 739 aaKnown RBP18.25■□□□□ 0.51
CACNA1A-227ENST00000636549 CRTC3Q6UUV7 619 aa18.25■□□□□ 0.51
CACNA1A-227ENST00000636549 SLC47A2Q86VL8 602 aa18.25■□□□□ 0.51
CACNA1A-227ENST00000636549 DEFB119Q8N690 84 aa18.25■□□□□ 0.51
CACNA1A-227ENST00000636549 OR6K2Q8NGY2 324 aa18.25■□□□□ 0.51
CACNA1A-227ENST00000636549 TMEM120AQ9BXJ8 343 aa18.25■□□□□ 0.51
CACNA1A-227ENST00000636549 PRKD2Q9BZL6 878 aa18.25■□□□□ 0.51
CACNA1A-227ENST00000636549 SPATA4Q8NEY3 305 aa18.25■□□□□ 0.51
CACNA1A-227ENST00000636549 MTG1Q9BT17 334 aaPredicted RBP18.25■□□□□ 0.51
CACNA1A-227ENST00000636549 ARMC7Q9H6L4 198 aa18.25■□□□□ 0.51
CACNA1A-227ENST00000636549 SMIM31A0A1B0GVY4 71 aa18.25■□□□□ 0.51
CACNA1A-227ENST00000636549 ABHD14A-ACY1A0A1B0GW23 586 aa18.25■□□□□ 0.51
CACNA1A-227ENST00000636549 PDXKO00764 312 aa18.25■□□□□ 0.51
CACNA1A-227ENST00000636549 SLC2A3P11169 496 aa18.25■□□□□ 0.51
CACNA1A-227ENST00000636549 POLD2P49005 469 aa18.25■□□□□ 0.51
CACNA1A-227ENST00000636549 TLK2Q86UE8 772 aa18.25■□□□□ 0.51
CACNA1A-227ENST00000636549 NEDD1Q8NHV4 660 aa18.25■□□□□ 0.51
CACNA1A-227ENST00000636549 EPS8L3Q8TE67 593 aaKnown RBP18.25■□□□□ 0.51
CACNA1A-227ENST00000636549 CMTM5Q96DZ9 223 aa18.25■□□□□ 0.51
CACNA1A-227ENST00000636549 AAR2Q9Y312 384 aaKnown RBP18.25■□□□□ 0.51
CACNA1A-227ENST00000636549 SHANK2Q9UPX8 1470 aa18.25■□□□□ 0.51
CACNA1A-227ENST00000636549 EIF3DO15371 548 aaKnown RBP eCLIP18.25■□□□□ 0.51
CACNA1A-227ENST00000636549 PPP2R1BP30154 601 aa18.25■□□□□ 0.51
CACNA1A-227ENST00000636549 WLSQ5T9L3 541 aa18.25■□□□□ 0.51
CACNA1A-227ENST00000636549 ARMCX6Q7L4S7 300 aa18.25■□□□□ 0.51
CACNA1A-227ENST00000636549 ENGASEQ8NFI3 743 aa18.25■□□□□ 0.51
CACNA1A-227ENST00000636549 OLFM3Q96PB7 478 aa18.25■□□□□ 0.51
CACNA1A-227ENST00000636549 LRRC4BQ9NT99 713 aa18.25■□□□□ 0.51
CACNA1A-227ENST00000636549 SIRPGQ9P1W8 387 aa18.25■□□□□ 0.51
CACNA1A-227ENST00000636549 FAM50BQ9Y247 325 aa18.25■□□□□ 0.51
CACNA1A-227ENST00000636549 PCDHB5Q9Y5E4 795 aa18.25■□□□□ 0.51
CACNA1A-227ENST00000636549 WDR27A2RRH5 827 aa18.25■□□□□ 0.51
CACNA1A-227ENST00000636549 VPS4BO75351 444 aa18.25■□□□□ 0.51
CACNA1A-227ENST00000636549 CTPS1P17812 591 aa18.25■□□□□ 0.51
CACNA1A-227ENST00000636549 PTPN3P26045 913 aa18.25■□□□□ 0.51
CACNA1A-227ENST00000636549 MTAPQ13126 283 aa18.25■□□□□ 0.51
CACNA1A-227ENST00000636549 MFSD7Q6UXD7 560 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms