RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 CYP4A11Q02928 519 aa3.19□□□□□ -1.9
PSPC1-208ENST00000635562 NSUN2Q08J23 767 aaKnown RBP eCLIP3.19□□□□□ -1.9
PSPC1-208ENST00000635562 HNRNPA0Q13151 305 aaKnown RBP3.19□□□□□ -1.9
PSPC1-208ENST00000635562 SLC13A2Q13183 592 aa3.19□□□□□ -1.9
PSPC1-208ENST00000635562 BOP1Q14137 746 aaKnown RBP3.19□□□□□ -1.9
PSPC1-208ENST00000635562 OASLQ15646 514 aaKnown RBP3.19□□□□□ -1.9
PSPC1-208ENST00000635562 ARL13BQ3SXY8 428 aa3.19□□□□□ -1.9
PSPC1-208ENST00000635562 ODF2Q5BJF6 829 aa3.19□□□□□ -1.9
PSPC1-208ENST00000635562 SPDYCQ5MJ68 293 aa3.19□□□□□ -1.9
PSPC1-208ENST00000635562 CCDC122Q5T0U0 273 aa3.19□□□□□ -1.9
PSPC1-208ENST00000635562 STRIP1Q5VSL9 837 aa3.19□□□□□ -1.9
PSPC1-208ENST00000635562 GPR139Q6DWJ6 353 aa3.19□□□□□ -1.9
PSPC1-208ENST00000635562 TMEM110Q86TL2 294 aa3.19□□□□□ -1.9
PSPC1-208ENST00000635562 HEATR4Q86WZ0 1026 aa3.19□□□□□ -1.9
PSPC1-208ENST00000635562 DZIP1Q86YF9 867 aaKnown RBP3.19□□□□□ -1.9
PSPC1-208ENST00000635562 CACNA2D3Q8IZS8 1091 aa3.19□□□□□ -1.9
PSPC1-208ENST00000635562 VPS52Q8N1B4 723 aa3.19□□□□□ -1.9
PSPC1-208ENST00000635562 CFAP52Q8N1V2 620 aa3.19□□□□□ -1.9
PSPC1-208ENST00000635562 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.19□□□□□ -1.9
PSPC1-208ENST00000635562 AOPEPQ8N6M6 819 aa3.19□□□□□ -1.9
PSPC1-208ENST00000635562 PDPRQ8NCN5 879 aa3.19□□□□□ -1.9
PSPC1-208ENST00000635562 SLC17A8Q8NDX2 589 aa3.19□□□□□ -1.9
PSPC1-208ENST00000635562 SIMC1Q8NDZ2 872 aa3.19□□□□□ -1.9
PSPC1-208ENST00000635562 OR56A3Q8NH54 315 aa3.19□□□□□ -1.9
PSPC1-208ENST00000635562 POC1BQ8TC44 478 aa3.19□□□□□ -1.9
PSPC1-208ENST00000635562 OTUD7AQ8TE49 926 aaPredicted RBP3.19□□□□□ -1.9
PSPC1-208ENST00000635562 UCMAQ8WVF2 138 aa3.19□□□□□ -1.9
PSPC1-208ENST00000635562 RFFLQ8WZ73 363 aa3.19□□□□□ -1.9
PSPC1-208ENST00000635562 BICD1Q96G01 975 aa3.19□□□□□ -1.9
PSPC1-208ENST00000635562 NAF1Q96HR8 494 aaKnown RBP3.19□□□□□ -1.9
PSPC1-208ENST00000635562 CLMNQ96JQ2 1002 aa3.19□□□□□ -1.9
PSPC1-208ENST00000635562 COG8Q96MW5 612 aa3.19□□□□□ -1.9
PSPC1-208ENST00000635562 PIGSQ96S52 555 aa3.19□□□□□ -1.9
PSPC1-208ENST00000635562 DCLRE1CQ96SD1 692 aaKnown RBP3.19□□□□□ -1.9
PSPC1-208ENST00000635562 EYA3Q99504 573 aa3.19□□□□□ -1.9
PSPC1-208ENST00000635562 GDF15Q99988 308 aa3.19□□□□□ -1.9
PSPC1-208ENST00000635562 SLC39A3Q9BRY0 314 aa3.19□□□□□ -1.9
PSPC1-208ENST00000635562 NTPCRQ9BSD7 190 aaKnown RBP3.19□□□□□ -1.9
PSPC1-208ENST00000635562 BRIP1Q9BX63 1249 aa3.19□□□□□ -1.9
PSPC1-208ENST00000635562 TEX13AQ9BXU3 409 aaPredicted RBP3.19□□□□□ -1.9
PSPC1-208ENST00000635562 MAK16Q9BXY0 300 aaKnown RBP3.19□□□□□ -1.9
PSPC1-208ENST00000635562 EDEM3Q9BZQ6 932 aa3.19□□□□□ -1.9
PSPC1-208ENST00000635562 ZNF518BQ9C0D4 1074 aa3.19□□□□□ -1.9
PSPC1-208ENST00000635562 NT5C3AQ9H0P0 336 aa3.19□□□□□ -1.9
PSPC1-208ENST00000635562 RXFP3Q9NSD7 469 aa3.19□□□□□ -1.9
PSPC1-208ENST00000635562 INTS10Q9NVR2 710 aaKnown RBP3.19□□□□□ -1.9
PSPC1-208ENST00000635562 HSFX1Q9UBD0 423 aa3.19□□□□□ -1.9
PSPC1-208ENST00000635562 ORC3Q9UBD5 711 aaPredicted RBP3.19□□□□□ -1.9
PSPC1-208ENST00000635562 EXTL2Q9UBQ6 330 aa3.19□□□□□ -1.9
PSPC1-208ENST00000635562 DKK2Q9UBU2 259 aa3.19□□□□□ -1.9
PSPC1-208ENST00000635562 HESX1Q9UBX0 185 aa3.19□□□□□ -1.9
PSPC1-208ENST00000635562 TBC1D29Q9UFV1 150 aa3.19□□□□□ -1.9
PSPC1-208ENST00000635562 CHORDC1Q9UHD1 332 aaPredicted RBP3.19□□□□□ -1.9
PSPC1-208ENST00000635562 ZNHIT2Q9UHR6 403 aa3.19□□□□□ -1.9
PSPC1-208ENST00000635562 HPCAL4Q9UM19 191 aa3.19□□□□□ -1.9
PSPC1-208ENST00000635562 PCDHGB5Q9Y5G0 923 aa3.19□□□□□ -1.9
PSPC1-208ENST00000635562 SNX13Q9Y5W8 968 aa3.19□□□□□ -1.9
PSPC1-208ENST00000635562 HS3ST4Q9Y661 456 aa3.19□□□□□ -1.9
PSPC1-208ENST00000635562 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.19□□□□□ -1.9
PSPC1-208ENST00000635562 ZNF804BA4D1E1 1349 aa3.19□□□□□ -1.9
PSPC1-208ENST00000635562 KIF16BQ96L93 1317 aa3.19□□□□□ -1.9
PSPC1-208ENST00000635562 PASKQ96RG2 1323 aa3.19□□□□□ -1.9
PSPC1-208ENST00000635562 GPR75-ASB3A0A0A6YYF3 556 aa3.18□□□□□ -1.9
PSPC1-208ENST00000635562 POM121BA6NF01 834 aa3.18□□□□□ -1.9
PSPC1-208ENST00000635562 CLCA1A8K7I4 914 aa3.18□□□□□ -1.9
PSPC1-208ENST00000635562 A8MVJ9 347 aa3.18□□□□□ -1.9
PSPC1-208ENST00000635562 AHRRA9YTQ3 701 aa3.18□□□□□ -1.9
PSPC1-208ENST00000635562 TMEM233B4DJY2 109 aa3.18□□□□□ -1.9
PSPC1-208ENST00000635562 M0QYG6 137 aa3.18□□□□□ -1.9
PSPC1-208ENST00000635562 KIF2AO00139 706 aaPredicted RBP3.18□□□□□ -1.9
PSPC1-208ENST00000635562 ADAMTS3O15072 1205 aa3.18□□□□□ -1.9
PSPC1-208ENST00000635562 DCLK1O15075 740 aa3.18□□□□□ -1.9
PSPC1-208ENST00000635562 ZNF185O15231 689 aa3.18□□□□□ -1.9
PSPC1-208ENST00000635562 TBC1D4O60343 1298 aa3.18□□□□□ -1.9
PSPC1-208ENST00000635562 FAM20BO75063 409 aa3.18□□□□□ -1.9
PSPC1-208ENST00000635562 ZFPL1O95159 310 aa3.18□□□□□ -1.9
PSPC1-208ENST00000635562 STARD3NLO95772 234 aa3.18□□□□□ -1.9
PSPC1-208ENST00000635562 MT-ND5P03915 603 aa3.18□□□□□ -1.9
PSPC1-208ENST00000635562 GRPP07492 148 aa3.18□□□□□ -1.9
PSPC1-208ENST00000635562 CCDC172P0C7W6 258 aa3.18□□□□□ -1.9
PSPC1-208ENST00000635562 SRGAP2BP0DMP2 458 aa3.18□□□□□ -1.9
PSPC1-208ENST00000635562 PCP11498 1178 aaKnown RBP3.18□□□□□ -1.9
PSPC1-208ENST00000635562 FERP16591 822 aa3.18□□□□□ -1.9
PSPC1-208ENST00000635562 CNTFP26441 200 aa3.18□□□□□ -1.9
PSPC1-208ENST00000635562 KLRC1P26715 233 aa3.18□□□□□ -1.9
PSPC1-208ENST00000635562 ACTN2P35609 894 aa3.18□□□□□ -1.9
PSPC1-208ENST00000635562 VIPR2P41587 438 aa3.18□□□□□ -1.9
PSPC1-208ENST00000635562 TECP42680 631 aa3.18□□□□□ -1.9
PSPC1-208ENST00000635562 UCP3P55916 312 aa3.18□□□□□ -1.9
PSPC1-208ENST00000635562 RRP1P56182 461 aaKnown RBP3.18□□□□□ -1.9
PSPC1-208ENST00000635562 WNT3P56703 355 aa3.18□□□□□ -1.9
PSPC1-208ENST00000635562 AP2B1P63010 937 aa3.18□□□□□ -1.9
PSPC1-208ENST00000635562 TFCP2Q12800 502 aa3.18□□□□□ -1.9
PSPC1-208ENST00000635562 ZBTB17Q13105 803 aa3.18□□□□□ -1.9
PSPC1-208ENST00000635562 CUL4AQ13619 759 aa3.18□□□□□ -1.9
PSPC1-208ENST00000635562 RAB32Q13637 225 aa3.18□□□□□ -1.9
PSPC1-208ENST00000635562 POSTNQ15063 836 aa3.18□□□□□ -1.9
PSPC1-208ENST00000635562 TIGD2Q4W5G0 525 aa3.18□□□□□ -1.9
PSPC1-208ENST00000635562 KRBOX4Q5JUW0 171 aa3.18□□□□□ -1.9
PSPC1-208ENST00000635562 FAM209BQ5JX69 171 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms