RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 CMTM8Q8IZV2 173 aa15.02□□□□□ -0.01
LINC00339-208ENST00000634934 CENPIQ92674 756 aaPredicted RBP15.02□□□□□ -0.01
LINC00339-208ENST00000634934 FGF13Q92913 245 aa15.02□□□□□ -0.01
LINC00339-208ENST00000634934 NECAB3Q96P71 396 aaPredicted RBP15.02□□□□□ -0.01
LINC00339-208ENST00000634934 ALS2CR12Q96Q35 445 aa15.02□□□□□ -0.01
LINC00339-208ENST00000634934 MED4Q9NPJ6 270 aa15.02□□□□□ -0.01
LINC00339-208ENST00000634934 GKN1Q9NS71 199 aa15.02□□□□□ -0.01
LINC00339-208ENST00000634934 PIGVQ9NUD9 493 aa15.02□□□□□ -0.01
LINC00339-208ENST00000634934 ZMYM5Q9UJ78 669 aa15.02□□□□□ -0.01
LINC00339-208ENST00000634934 CPQQ9Y646 472 aa15.02□□□□□ -0.01
LINC00339-208ENST00000634934 CAPN6Q9Y6Q1 641 aa15.02□□□□□ -0.01
LINC00339-208ENST00000634934 NOTCH4Q99466 2003 aa15.01□□□□□ -0.01
LINC00339-208ENST00000634934 SOBPA7XYQ1 873 aa15.01□□□□□ -0.01
LINC00339-208ENST00000634934 IRAK2O43187 625 aa15.01□□□□□ -0.01
LINC00339-208ENST00000634934 SPOPO43791 374 aa15.01□□□□□ -0.01
LINC00339-208ENST00000634934 OLFM2O95897 454 aa15.01□□□□□ -0.01
LINC00339-208ENST00000634934 IGLV3-25P01717 112 aa15.01□□□□□ -0.01
LINC00339-208ENST00000634934 IRF1P10914 325 aa15.01□□□□□ -0.01
LINC00339-208ENST00000634934 COMTP21964 271 aa15.01□□□□□ -0.01
LINC00339-208ENST00000634934 GBP2P32456 591 aaPredicted RBP15.01□□□□□ -0.01
LINC00339-208ENST00000634934 MAN1A1P33908 653 aa15.01□□□□□ -0.01
LINC00339-208ENST00000634934 HDAC4P56524 1084 aa15.01□□□□□ -0.01
LINC00339-208ENST00000634934 TBX4P57082 545 aa15.01□□□□□ -0.01
LINC00339-208ENST00000634934 ACAP1Q15027 740 aa15.01□□□□□ -0.01
LINC00339-208ENST00000634934 TRIP4Q15650 581 aaPredicted RBP15.01□□□□□ -0.01
LINC00339-208ENST00000634934 MAP9Q49MG5 647 aa15.01□□□□□ -0.01
LINC00339-208ENST00000634934 C11orf63Q6NUN7 778 aa15.01□□□□□ -0.01
LINC00339-208ENST00000634934 FAM131BQ86XD5 332 aa15.01□□□□□ -0.01
LINC00339-208ENST00000634934 NIPA2Q8N8Q9 360 aa15.01□□□□□ -0.01
LINC00339-208ENST00000634934 ZSCAN18Q8TBC5 510 aaPredicted RBP15.01□□□□□ -0.01
LINC00339-208ENST00000634934 SUSD6Q92537 303 aa15.01□□□□□ -0.01
LINC00339-208ENST00000634934 PGAP3Q96FM1 320 aaPredicted RBP15.01□□□□□ -0.01
LINC00339-208ENST00000634934 PCSK1NQ9UHG2 260 aa15.01□□□□□ -0.01
LINC00339-208ENST00000634934 CDH7Q9ULB5 785 aa15.01□□□□□ -0.01
LINC00339-208ENST00000634934 TLR6Q9Y2C9 796 aa15.01□□□□□ -0.01
LINC00339-208ENST00000634934 ALG6Q9Y672 507 aa15.01□□□□□ -0.01
LINC00339-208ENST00000634934 LRCH4O75427 683 aa15□□□□□ -0.01
LINC00339-208ENST00000634934 ENDOD1O94919 500 aa15□□□□□ -0.01
LINC00339-208ENST00000634934 SEC31AO94979 1220 aaKnown RBP15□□□□□ -0.01
LINC00339-208ENST00000634934 OAS2P29728 719 aaKnown RBP15□□□□□ -0.01
LINC00339-208ENST00000634934 MIPP30301 263 aa15□□□□□ -0.01
LINC00339-208ENST00000634934 KPNA1P52294 538 aaPredicted RBP15□□□□□ -0.01
LINC00339-208ENST00000634934 SLC7A9P82251 487 aa15□□□□□ -0.01
LINC00339-208ENST00000634934 COG7P83436 770 aa15□□□□□ -0.01
LINC00339-208ENST00000634934 SMAD2Q15796 467 aaKnown RBP15□□□□□ -0.01
LINC00339-208ENST00000634934 ZC3H12AQ5D1E8 599 aaKnown RBP15□□□□□ -0.01
LINC00339-208ENST00000634934 TJAP1Q5JTD0 557 aa15□□□□□ -0.01
LINC00339-208ENST00000634934 POTEHQ6S545 545 aa15□□□□□ -0.01
LINC00339-208ENST00000634934 ARID3BQ8IVW6 561 aaPredicted RBP15□□□□□ -0.01
LINC00339-208ENST00000634934 SYCE1Q8N0S2 351 aa15□□□□□ -0.01
LINC00339-208ENST00000634934 ARFGAP1Q8N6T3 406 aa15□□□□□ -0.01
LINC00339-208ENST00000634934 LRRC57Q8N9N7 239 aa15□□□□□ -0.01
LINC00339-208ENST00000634934 KLF16Q9BXK1 252 aaPredicted RBP15□□□□□ -0.01
LINC00339-208ENST00000634934 WDCPQ9H6R7 721 aa15□□□□□ -0.01
LINC00339-208ENST00000634934 GDE1Q9NZC3 331 aa15□□□□□ -0.01
LINC00339-208ENST00000634934 HBS1LQ9Y450 684 aaKnown RBP15□□□□□ -0.01
LINC00339-208ENST00000634934 SAR1BQ9Y6B6 198 aa15□□□□□ -0.01
LINC00339-208ENST00000634934 DENND4AQ7Z401 1863 aa15□□□□□ -0.01
LINC00339-208ENST00000634934 PRPSAP2O60256 369 aa14.99□□□□□ -0.01
LINC00339-208ENST00000634934 FTCDO95954 541 aa14.99□□□□□ -0.01
LINC00339-208ENST00000634934 MOCS2O96007 188 aaPredicted RBP14.99□□□□□ -0.01
LINC00339-208ENST00000634934 APOEP02649 317 aa14.99□□□□□ -0.01
LINC00339-208ENST00000634934 TCF4P15884 667 aa14.99□□□□□ -0.01
LINC00339-208ENST00000634934 SP100P23497 879 aaPredicted RBP14.99□□□□□ -0.01
LINC00339-208ENST00000634934 CCR1P32246 355 aa14.99□□□□□ -0.01
LINC00339-208ENST00000634934 PCK1P35558 622 aa14.99□□□□□ -0.01
LINC00339-208ENST00000634934 GJC1P36383 396 aa14.99□□□□□ -0.01
LINC00339-208ENST00000634934 SLC1A1P43005 524 aa14.99□□□□□ -0.01
LINC00339-208ENST00000634934 CXCR3P49682 368 aa14.99□□□□□ -0.01
LINC00339-208ENST00000634934 NNTQ13423 1086 aa14.99□□□□□ -0.01
LINC00339-208ENST00000634934 FAM78AQ5JUQ0 283 aa14.99□□□□□ -0.01
LINC00339-208ENST00000634934 BNIPLQ7Z465 357 aa14.99□□□□□ -0.01
LINC00339-208ENST00000634934 USP13Q92995 863 aaPredicted RBP14.99□□□□□ -0.01
LINC00339-208ENST00000634934 ZFRQ96KR1 1074 aaKnown RBP14.99□□□□□ -0.01
LINC00339-208ENST00000634934 FCRL2Q96LA5 508 aaPredicted RBP14.99□□□□□ -0.01
LINC00339-208ENST00000634934 MYADMQ96S97 322 aa14.99□□□□□ -0.01
LINC00339-208ENST00000634934 NCAPGQ9BPX3 1015 aa14.99□□□□□ -0.01
LINC00339-208ENST00000634934 ZWILCHQ9H900 591 aa14.99□□□□□ -0.01
LINC00339-208ENST00000634934 TDP1Q9NUW8 608 aa14.99□□□□□ -0.01
LINC00339-208ENST00000634934 ARHGAP26Q9UNA1 814 aa14.99□□□□□ -0.01
LINC00339-208ENST00000634934 CCL26Q9Y258 94 aa14.99□□□□□ -0.01
LINC00339-208ENST00000634934 ANAPC1Q9H1A4 1944 aa14.98□□□□□ -0.01
LINC00339-208ENST00000634934 PRAMEF12O95522 483 aa14.98□□□□□ -0.01
LINC00339-208ENST00000634934 SLC2A3P11169 496 aa14.98□□□□□ -0.01
LINC00339-208ENST00000634934 HADHQ16836 314 aaKnown RBP14.98□□□□□ -0.01
LINC00339-208ENST00000634934 PEX26Q7Z412 305 aa14.98□□□□□ -0.01
LINC00339-208ENST00000634934 ST13P5Q8NFI4 369 aaPredicted RBP14.98□□□□□ -0.01
LINC00339-208ENST00000634934 TRIM58Q8NG06 486 aa14.98□□□□□ -0.01
LINC00339-208ENST00000634934 FAM71BQ8TC56 605 aa14.98□□□□□ -0.01
LINC00339-208ENST00000634934 ADAMTS19Q8TE59 1207 aa14.98□□□□□ -0.01
LINC00339-208ENST00000634934 SH3RF2Q8TEC5 729 aa14.98□□□□□ -0.01
LINC00339-208ENST00000634934 SMARCD2Q92925 531 aa14.98□□□□□ -0.01
LINC00339-208ENST00000634934 PLD4Q96BZ4 506 aa14.98□□□□□ -0.01
LINC00339-208ENST00000634934 SLC39A13Q96H72 371 aa14.98□□□□□ -0.01
LINC00339-208ENST00000634934 PNKPQ96T60 521 aa14.98□□□□□ -0.01
LINC00339-208ENST00000634934 TMEM51Q9NW97 253 aa14.98□□□□□ -0.01
LINC00339-208ENST00000634934 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.98□□□□□ -0.012e-6■■□□□ 13.8
LINC00339-208ENST00000634934 CFAP97Q9P2B7 532 aa14.98□□□□□ -0.01
LINC00339-208ENST00000634934 AMFRQ9UKV5 643 aa14.98□□□□□ -0.01
LINC00339-208ENST00000634934 USP18Q9UMW8 372 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms