RNA–Protein interactions for RNA: ENST00000634363.1

SNRNP48-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-203ENST00000634363 DNMT3LQ9UJW3 386 aa16.31■□□□□ 0.2
SNRNP48-203ENST00000634363 SCML2Q9UQR0 700 aa16.31■□□□□ 0.2
SNRNP48-203ENST00000634363 MSRB2Q9Y3D2 182 aa16.31■□□□□ 0.2
SNRNP48-203ENST00000634363 PCDHB9Q9Y5E1 797 aa16.31■□□□□ 0.2
SNRNP48-203ENST00000634363 FRYQ5TBA9 3013 aa16.31■□□□□ 0.2
SNRNP48-203ENST00000634363 UPK3BL1B0FP48 263 aa16.3■□□□□ 0.2
SNRNP48-203ENST00000634363 UPK3BL2E5RIL1 263 aa16.3■□□□□ 0.2
SNRNP48-203ENST00000634363 CD59P13987 128 aa16.3■□□□□ 0.2
SNRNP48-203ENST00000634363 SYCP2LQ5T4T6 812 aa16.3■□□□□ 0.2
SNRNP48-203ENST00000634363 CLEC20AQ6ZU45 233 aa16.3■□□□□ 0.2
SNRNP48-203ENST00000634363 FAM81BQ96LP2 452 aa16.3■□□□□ 0.2
SNRNP48-203ENST00000634363 BPIFA3Q9BQP9 254 aa16.3■□□□□ 0.2
SNRNP48-203ENST00000634363 NMUR1Q9HB89 426 aa16.3■□□□□ 0.2
SNRNP48-203ENST00000634363 CYLDQ9NQC7 956 aa16.3■□□□□ 0.2
SNRNP48-203ENST00000634363 TAB2Q9NYJ8 693 aa16.3■□□□□ 0.2
SNRNP48-203ENST00000634363 NAGPAQ9UK23 515 aa16.3■□□□□ 0.2
SNRNP48-203ENST00000634363 CACNA1GO43497 2377 aa16.3■□□□□ 0.2
SNRNP48-203ENST00000634363 CHD6Q8TD26 2715 aa16.3■□□□□ 0.2
SNRNP48-203ENST00000634363 CEP295Q9C0D2 2601 aa16.29■□□□□ 0.2
SNRNP48-203ENST00000634363 SMTNL1A8MU46 457 aa16.29■□□□□ 0.2
SNRNP48-203ENST00000634363 SH3BP5O60239 455 aa16.29■□□□□ 0.2
SNRNP48-203ENST00000634363 HMBSP08397 361 aa16.29■□□□□ 0.2
SNRNP48-203ENST00000634363 CISD3P0C7P0 127 aa16.29■□□□□ 0.2
SNRNP48-203ENST00000634363 GNSP15586 552 aa16.29■□□□□ 0.2
SNRNP48-203ENST00000634363 CDK11BP21127 795 aaKnown RBP16.29■□□□□ 0.2
SNRNP48-203ENST00000634363 ZNF165P49910 485 aa16.29■□□□□ 0.2
SNRNP48-203ENST00000634363 GCNT1Q02742 428 aa16.29■□□□□ 0.2
SNRNP48-203ENST00000634363 COL9A2Q14055 689 aaPredicted RBP16.29■□□□□ 0.2
SNRNP48-203ENST00000634363 NFKBIBQ15653 356 aa16.29■□□□□ 0.2
SNRNP48-203ENST00000634363 ZSCAN23Q3MJ62 389 aa16.29■□□□□ 0.2
SNRNP48-203ENST00000634363 MIIPQ5JXC2 388 aa16.29■□□□□ 0.2
SNRNP48-203ENST00000634363 TRIM65Q6PJ69 517 aa16.29■□□□□ 0.2
SNRNP48-203ENST00000634363 RRAGAQ7L523 313 aa16.29■□□□□ 0.2
SNRNP48-203ENST00000634363 ARHGEF19Q8IW93 802 aa16.29■□□□□ 0.2
SNRNP48-203ENST00000634363 TMEM176AQ96HP8 235 aa16.29■□□□□ 0.2
SNRNP48-203ENST00000634363 ZNF419Q96HQ0 510 aaPredicted RBP16.29■□□□□ 0.2
SNRNP48-203ENST00000634363 HEXIM2Q96MH2 286 aaKnown RBP16.29■□□□□ 0.2
SNRNP48-203ENST00000634363 HNRNPABQ99729 332 aaKnown RBP16.29■□□□□ 0.2
SNRNP48-203ENST00000634363 GABRG3Q99928 467 aa16.29■□□□□ 0.2
SNRNP48-203ENST00000634363 FUCA2Q9BTY2 467 aa16.29■□□□□ 0.2
SNRNP48-203ENST00000634363 CD248Q9HCU0 757 aa16.29■□□□□ 0.2
SNRNP48-203ENST00000634363 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.29■□□□□ 0.2
SNRNP48-203ENST00000634363 MARK1Q9P0L2 795 aa16.29■□□□□ 0.2
SNRNP48-203ENST00000634363 PCDHB4Q9Y5E5 795 aa16.29■□□□□ 0.2
SNRNP48-203ENST00000634363 STON1Q9Y6Q2 735 aa16.29■□□□□ 0.2
SNRNP48-203ENST00000634363 PCDH15Q96QU1 1955 aa16.29■□□□□ 0.2
SNRNP48-203ENST00000634363 BECN2A8MW95 431 aa16.28■□□□□ 0.2
SNRNP48-203ENST00000634363 HHLA1C9JL84 531 aa16.28■□□□□ 0.2
SNRNP48-203ENST00000634363 H0Y626 953 aa16.28■□□□□ 0.2
SNRNP48-203ENST00000634363 TRIM16O95361 564 aa16.28■□□□□ 0.2
SNRNP48-203ENST00000634363 HOXB3P14651 431 aaPredicted RBP16.28■□□□□ 0.2
SNRNP48-203ENST00000634363 RAD23BP54727 409 aa16.28■□□□□ 0.2
SNRNP48-203ENST00000634363 KRT31Q15323 416 aa16.28■□□□□ 0.2
SNRNP48-203ENST00000634363 TRIP6Q15654 476 aaKnown RBP16.28■□□□□ 0.2
SNRNP48-203ENST00000634363 FKBP15Q5T1M5 1219 aa16.28■□□□□ 0.2
SNRNP48-203ENST00000634363 TMEM270Q6UE05 265 aa16.28■□□□□ 0.2
SNRNP48-203ENST00000634363 ENOSF1Q7L5Y1 443 aa16.28■□□□□ 0.2
SNRNP48-203ENST00000634363 PNPLA1Q8N8W4 532 aa16.28■□□□□ 0.2
SNRNP48-203ENST00000634363 FOXJ1Q92949 421 aa16.28■□□□□ 0.2
SNRNP48-203ENST00000634363 MIR1-1HGQ9H1L0 117 aa16.28■□□□□ 0.2
SNRNP48-203ENST00000634363 PRDM16Q9HAZ2 1276 aa16.28■□□□□ 0.2
SNRNP48-203ENST00000634363 UBE2TQ9NPD8 197 aaPredicted RBP16.28■□□□□ 0.2
SNRNP48-203ENST00000634363 DNAAF2Q9NVR5 837 aaKnown RBP16.28■□□□□ 0.2
SNRNP48-203ENST00000634363 APEX2Q9UBZ4 518 aa16.28■□□□□ 0.2
SNRNP48-203ENST00000634363 CACNA1EQ15878 2313 aa16.28■□□□□ 0.2
SNRNP48-203ENST00000634363 MEI4A8MW99 385 aa16.27■□□□□ 0.2
SNRNP48-203ENST00000634363 GFRA2O00451 464 aa16.27■□□□□ 0.2
SNRNP48-203ENST00000634363 STC2O76061 302 aa16.27■□□□□ 0.2
SNRNP48-203ENST00000634363 RALAP11233 206 aa16.27■□□□□ 0.2
SNRNP48-203ENST00000634363 CD19P15391 556 aa16.27■□□□□ 0.2
SNRNP48-203ENST00000634363 SLC9A1P19634 815 aa16.27■□□□□ 0.2
SNRNP48-203ENST00000634363 PON1P27169 355 aa16.27■□□□□ 0.2
SNRNP48-203ENST00000634363 CD6P30203 668 aa16.27■□□□□ 0.2
SNRNP48-203ENST00000634363 MFAP3P55082 362 aa16.27■□□□□ 0.2
SNRNP48-203ENST00000634363 RING1Q06587 406 aa16.27■□□□□ 0.2
SNRNP48-203ENST00000634363 STARD3Q14849 445 aa16.27■□□□□ 0.2
SNRNP48-203ENST00000634363 NCAPHQ15003 741 aa16.27■□□□□ 0.2
SNRNP48-203ENST00000634363 FUT11Q495W5 492 aa16.27■□□□□ 0.2
SNRNP48-203ENST00000634363 WDR45BQ5MNZ6 344 aa16.27■□□□□ 0.2
SNRNP48-203ENST00000634363 SLC4A11Q8NBS3 891 aa16.27■□□□□ 0.2
SNRNP48-203ENST00000634363 KAT5Q92993 513 aa16.27■□□□□ 0.2
SNRNP48-203ENST00000634363 GPR174Q9BXC1 333 aa16.27■□□□□ 0.2
SNRNP48-203ENST00000634363 VPS16Q9H269 839 aa16.27■□□□□ 0.2
SNRNP48-203ENST00000634363 SUSD2Q9UGT4 822 aa16.27■□□□□ 0.2
SNRNP48-203ENST00000634363 RASAL2Q9UJF2 1139 aa16.27■□□□□ 0.2
SNRNP48-203ENST00000634363 KLKB1P03952 638 aa16.26■□□□□ 0.19
SNRNP48-203ENST00000634363 KRT5P13647 590 aa16.26■□□□□ 0.19
SNRNP48-203ENST00000634363 TPM4P67936 248 aa16.26■□□□□ 0.19
SNRNP48-203ENST00000634363 EFEMP1Q12805 493 aa16.26■□□□□ 0.19
SNRNP48-203ENST00000634363 HNRNPDQ14103 355 aaKnown RBP16.26■□□□□ 0.19
SNRNP48-203ENST00000634363 ZNF423Q2M1K9 1284 aa16.26■□□□□ 0.19
SNRNP48-203ENST00000634363 SGO2Q562F6 1265 aa16.26■□□□□ 0.19
SNRNP48-203ENST00000634363 KLHDC10Q6PID8 442 aa16.26■□□□□ 0.19
SNRNP48-203ENST00000634363 LRSAM1Q6UWE0 723 aa16.26■□□□□ 0.19
SNRNP48-203ENST00000634363 Q6ZNB5 142 aa16.26■□□□□ 0.19
SNRNP48-203ENST00000634363 SCD5Q86SK9 330 aa16.26■□□□□ 0.19
SNRNP48-203ENST00000634363 TADA2BQ86TJ2 420 aa16.26■□□□□ 0.19
SNRNP48-203ENST00000634363 DHX40Q8IX18 779 aaKnown RBP16.26■□□□□ 0.19
SNRNP48-203ENST00000634363 UBR7Q8N806 425 aa16.26■□□□□ 0.19
SNRNP48-203ENST00000634363 RBBP8NLQ8NC74 664 aaPredicted RBP16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms