RNA–Protein interactions for RNA: ENST00000630962.1

SRP54-214, Transcript of signal recognition particle 54, humanhuman

TSL 5 BASIC

Gene SRP54, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-214ENST00000630962 PCDHB7Q9Y5E2 793 aa3.82□□□□□ -1.8
SRP54-214ENST00000630962 C3orf70A6NLC5 250 aaPredicted RBP3.81□□□□□ -1.8
SRP54-214ENST00000630962 PODXLO00592 558 aa3.81□□□□□ -1.8
SRP54-214ENST00000630962 INSIG1O15503 277 aa3.81□□□□□ -1.8
SRP54-214ENST00000630962 CTIFO43310 598 aaKnown RBP3.81□□□□□ -1.8
SRP54-214ENST00000630962 NTSR2O95665 410 aa3.81□□□□□ -1.8
SRP54-214ENST00000630962 MBPP02686 304 aaPredicted RBP3.81□□□□□ -1.8
SRP54-214ENST00000630962 AKR1A1P14550 325 aa3.81□□□□□ -1.8
SRP54-214ENST00000630962 ITGB6P18564 788 aa3.81□□□□□ -1.8
SRP54-214ENST00000630962 TBXAS1P24557 533 aaPredicted RBP3.81□□□□□ -1.8
SRP54-214ENST00000630962 YY1P25490 414 aa3.81□□□□□ -1.8
SRP54-214ENST00000630962 IL6STP40189 918 aaPredicted RBP3.81□□□□□ -1.8
SRP54-214ENST00000630962 VPS41P49754 854 aa3.81□□□□□ -1.8
SRP54-214ENST00000630962 FHL3Q13643 280 aa3.81□□□□□ -1.8
SRP54-214ENST00000630962 PMS2P11Q13670 270 aa3.81□□□□□ -1.8
SRP54-214ENST00000630962 LONRF1Q17RB8 773 aa3.81□□□□□ -1.8
SRP54-214ENST00000630962 TRIM71Q2Q1W2 868 aaKnown RBP3.81□□□□□ -1.8
SRP54-214ENST00000630962 P3H1Q32P28 736 aa3.81□□□□□ -1.8
SRP54-214ENST00000630962 AWAT1Q58HT5 328 aa3.81□□□□□ -1.8
SRP54-214ENST00000630962 DGKKQ5KSL6 1271 aa3.81□□□□□ -1.8
SRP54-214ENST00000630962 WDR93Q6P2C0 686 aa3.81□□□□□ -1.8
SRP54-214ENST00000630962 TMEM88Q6PEY1 159 aa3.81□□□□□ -1.8
SRP54-214ENST00000630962 LVRNQ6Q4G3 990 aa3.81□□□□□ -1.8
SRP54-214ENST00000630962 LAS2Q8IYD9 372 aa3.81□□□□□ -1.8
SRP54-214ENST00000630962 NRSN1Q8IZ57 195 aa3.81□□□□□ -1.8
SRP54-214ENST00000630962 SLC44A5Q8NCS7 719 aa3.81□□□□□ -1.8
SRP54-214ENST00000630962 DEPTORQ8TB45 409 aa3.81□□□□□ -1.8
SRP54-214ENST00000630962 ASB12Q8WXK4 309 aa3.81□□□□□ -1.8
SRP54-214ENST00000630962 RSC1A1Q92681 617 aa3.81□□□□□ -1.8
SRP54-214ENST00000630962 GJA10Q969M2 543 aa3.81□□□□□ -1.8
SRP54-214ENST00000630962 RIPOR3Q96MK2 946 aa3.81□□□□□ -1.8
SRP54-214ENST00000630962 GDF15Q99988 308 aa3.81□□□□□ -1.8
SRP54-214ENST00000630962 SPRTNQ9H040 489 aaPredicted RBP3.81□□□□□ -1.8
SRP54-214ENST00000630962 CDCP1Q9H5V8 836 aa3.81□□□□□ -1.8
SRP54-214ENST00000630962 CERS4Q9HA82 394 aa3.81□□□□□ -1.8
SRP54-214ENST00000630962 ARFGAP3Q9NP61 516 aa3.81□□□□□ -1.8
SRP54-214ENST00000630962 KCNK9Q9NPC2 374 aa3.81□□□□□ -1.8
SRP54-214ENST00000630962 ASNSD1Q9NWL6 643 aa3.81□□□□□ -1.8
SRP54-214ENST00000630962 DTNAQ9Y4J8 743 aa3.81□□□□□ -1.8
SRP54-214ENST00000630962 LY6G6EA0A0G2JKS1 128 aa3.8□□□□□ -1.8
SRP54-214ENST00000630962 PNMA6EA0A0J9YXQ4 647 aa3.8□□□□□ -1.8
SRP54-214ENST00000630962 GXYLT2A0PJZ3 443 aa3.8□□□□□ -1.8
SRP54-214ENST00000630962 C2CD4BA6NLJ0 364 aa3.8□□□□□ -1.8
SRP54-214ENST00000630962 NPC1O15118 1278 aa3.8□□□□□ -1.8
SRP54-214ENST00000630962 KCNAB3O43448 404 aa3.8□□□□□ -1.8
SRP54-214ENST00000630962 HARSP12081 509 aaKnown RBP3.8□□□□□ -1.8
SRP54-214ENST00000630962 NDUFS1P28331 727 aa3.8□□□□□ -1.8
SRP54-214ENST00000630962 ALDH7A1P49419 539 aaKnown RBP3.8□□□□□ -1.8
SRP54-214ENST00000630962 POLE2P56282 527 aa3.8□□□□□ -1.8
SRP54-214ENST00000630962 YPEL5P62699 121 aa3.8□□□□□ -1.8
SRP54-214ENST00000630962 MTA1Q13330 715 aa3.8□□□□□ -1.8
SRP54-214ENST00000630962 SEC23BQ15437 767 aa3.8□□□□□ -1.8
SRP54-214ENST00000630962 SLC35G1Q2M3R5 365 aa3.8□□□□□ -1.8
SRP54-214ENST00000630962 MANEAQ5SRI9 462 aa3.8□□□□□ -1.8
SRP54-214ENST00000630962 RAP1GAP2Q684P5 730 aa3.8□□□□□ -1.8
SRP54-214ENST00000630962 ISM2Q6H9L7 571 aa3.8□□□□□ -1.8
SRP54-214ENST00000630962 ZNF793Q6ZN11 406 aa3.8□□□□□ -1.8
SRP54-214ENST00000630962 GLCCI1Q86VQ1 547 aa3.8□□□□□ -1.8
SRP54-214ENST00000630962 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.8□□□□□ -1.8
SRP54-214ENST00000630962 GLIS1Q8NBF1 620 aa3.8□□□□□ -1.8
SRP54-214ENST00000630962 CELF1Q92879 486 aaKnown RBP3.8□□□□□ -1.8
SRP54-214ENST00000630962 VCPIP1Q96JH7 1222 aa3.8□□□□□ -1.8
SRP54-214ENST00000630962 CLMNQ96JQ2 1002 aa3.8□□□□□ -1.8
SRP54-214ENST00000630962 ARNT2Q9HBZ2 717 aa3.8□□□□□ -1.8
SRP54-214ENST00000630962 TMEM184CQ9NVA4 438 aa3.8□□□□□ -1.8
SRP54-214ENST00000630962 TMEM45AQ9NWC5 275 aa3.8□□□□□ -1.8
SRP54-214ENST00000630962 VPS4AQ9UN37 437 aa3.8□□□□□ -1.8
SRP54-214ENST00000630962 CCDC187A0A096LP49 1063 aa3.79□□□□□ -1.8
SRP54-214ENST00000630962 FAM234BA2RU67 622 aa3.79□□□□□ -1.8
SRP54-214ENST00000630962 DPPA5A6NC42 116 aa3.79□□□□□ -1.8
SRP54-214ENST00000630962 IKBKBO14920 756 aa3.79□□□□□ -1.8
SRP54-214ENST00000630962 PLA2G6O60733 806 aa3.79□□□□□ -1.8
SRP54-214ENST00000630962 ZC3H11AO75152 810 aaKnown RBP eCLIP3.79□□□□□ -1.8
SRP54-214ENST00000630962 NDST3O95803 873 aa3.79□□□□□ -1.8
SRP54-214ENST00000630962 SNHG28P0DPA3 235 aa3.79□□□□□ -1.8
SRP54-214ENST00000630962 PRF1P14222 555 aa3.79□□□□□ -1.8
SRP54-214ENST00000630962 PECAM1P16284 738 aaPredicted RBP3.79□□□□□ -1.8
SRP54-214ENST00000630962 HOXD9P28356 352 aaPredicted RBP3.79□□□□□ -1.8
SRP54-214ENST00000630962 HSPA7P48741 367 aa3.79□□□□□ -1.8
SRP54-214ENST00000630962 ALDH18A1P54886 795 aaKnown RBP3.79□□□□□ -1.8
SRP54-214ENST00000630962 ELF2Q15723 593 aa3.79□□□□□ -1.8
SRP54-214ENST00000630962 ANXA2RQ3ZCQ2 193 aa3.79□□□□□ -1.8
SRP54-214ENST00000630962 AWAT2Q6E213 333 aa3.79□□□□□ -1.8
SRP54-214ENST00000630962 PIK3AP1Q6ZUJ8 805 aa3.79□□□□□ -1.8
SRP54-214ENST00000630962 GATAD2AQ86YP4 633 aa3.79□□□□□ -1.8
SRP54-214ENST00000630962 FAM186BQ8IYM0 893 aa3.79□□□□□ -1.8
SRP54-214ENST00000630962 MMP21Q8N119 569 aa3.79□□□□□ -1.8
SRP54-214ENST00000630962 C9orf106Q8NAJ2 232 aa3.79□□□□□ -1.8
SRP54-214ENST00000630962 ZBTB9Q96C00 473 aa3.79□□□□□ -1.8
SRP54-214ENST00000630962 TRMT61AQ96FX7 289 aaKnown RBP3.79□□□□□ -1.8
SRP54-214ENST00000630962 NAF1Q96HR8 494 aaKnown RBP3.79□□□□□ -1.8
SRP54-214ENST00000630962 TM2D2Q9BX73 214 aa3.79□□□□□ -1.8
SRP54-214ENST00000630962 STK33Q9BYT3 514 aa3.79□□□□□ -1.8
SRP54-214ENST00000630962 ZNF700Q9H0M5 742 aa3.79□□□□□ -1.8
SRP54-214ENST00000630962 FOXP1Q9H334 677 aaPredicted RBP3.79□□□□□ -1.8
SRP54-214ENST00000630962 TASP1Q9H6P5 420 aa3.79□□□□□ -1.8
SRP54-214ENST00000630962 SFXN1Q9H9B4 322 aa3.79□□□□□ -1.8
SRP54-214ENST00000630962 PRDM16Q9HAZ2 1276 aa3.79□□□□□ -1.8
SRP54-214ENST00000630962 AGO4Q9HCK5 861 aaKnown RBP3.79□□□□□ -1.8
SRP54-214ENST00000630962 NLRC4Q9NPP4 1024 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms