RNA–Protein interactions for RNA: ENST00000630016.1

CHD2-219, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 3

Gene CHD2, Length 607 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-219ENST00000630016 TNKSO95271 1327 aa4.03□□□□□ -1.76
CHD2-219ENST00000630016 TAF1LQ8IZX4 1826 aa4.03□□□□□ -1.76
CHD2-219ENST00000630016 TUBGCP6Q96RT7 1819 aa4.03□□□□□ -1.76
CHD2-219ENST00000630016 PRSS44E7EML9 344 aa4.03□□□□□ -1.76
CHD2-219ENST00000630016 H0YIN7 160 aa4.03□□□□□ -1.76
CHD2-219ENST00000630016 M0R3H8 397 aa4.03□□□□□ -1.76
CHD2-219ENST00000630016 CNOT3O75175 753 aaKnown RBP4.03□□□□□ -1.76
CHD2-219ENST00000630016 PMPCBO75439 489 aa4.03□□□□□ -1.76
CHD2-219ENST00000630016 SNUPNO95149 360 aaKnown RBP4.03□□□□□ -1.76
CHD2-219ENST00000630016 THP07101 528 aa4.03□□□□□ -1.76
CHD2-219ENST00000630016 AMPD3Q01432 767 aa4.03□□□□□ -1.76
CHD2-219ENST00000630016 CFHR1Q03591 330 aa4.03□□□□□ -1.76
CHD2-219ENST00000630016 LMAN2Q12907 356 aa4.03□□□□□ -1.76
CHD2-219ENST00000630016 ZIK1Q3SY52 487 aaPredicted RBP4.03□□□□□ -1.76
CHD2-219ENST00000630016 CERCAMQ5T4B2 595 aa4.03□□□□□ -1.76
CHD2-219ENST00000630016 TMTC4Q5T4D3 741 aa4.03□□□□□ -1.76
CHD2-219ENST00000630016 CATIPQ7Z7H3 387 aa4.03□□□□□ -1.76
CHD2-219ENST00000630016 RAB11FIP4Q86YS3 637 aa4.03□□□□□ -1.76
CHD2-219ENST00000630016 LIX1LQ8IVB5 337 aa4.03□□□□□ -1.76
CHD2-219ENST00000630016 ZFYVE19Q96K21 471 aa4.03□□□□□ -1.76
CHD2-219ENST00000630016 C17orf80Q9BSJ5 609 aa4.03□□□□□ -1.76
CHD2-219ENST00000630016 KLHL42Q9P2K6 505 aa4.03□□□□□ -1.76
CHD2-219ENST00000630016 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.03□□□□□ -1.76
CHD2-219ENST00000630016 KCPQ6ZWJ8 1503 aa4.03□□□□□ -1.76
CHD2-219ENST00000630016 FLT4P35916 1363 aa4.02□□□□□ -1.77
CHD2-219ENST00000630016 USP42Q9H9J4 1324 aaKnown RBP4.02□□□□□ -1.77
CHD2-219ENST00000630016 MON2Q7Z3U7 1717 aa4.02□□□□□ -1.77
CHD2-219ENST00000630016 ALG1L2C9J202 215 aa4.02□□□□□ -1.77
CHD2-219ENST00000630016 POU2F2P09086 479 aa4.02□□□□□ -1.77
CHD2-219ENST00000630016 TGFB3P10600 412 aa4.02□□□□□ -1.77
CHD2-219ENST00000630016 CDKN2AP42771 156 aaKnown RBP4.02□□□□□ -1.77
CHD2-219ENST00000630016 MTHFSP49914 203 aa4.02□□□□□ -1.77
CHD2-219ENST00000630016 LBX1P52954 281 aa4.02□□□□□ -1.77
CHD2-219ENST00000630016 COPB1P53618 953 aaKnown RBP4.02□□□□□ -1.77
CHD2-219ENST00000630016 AWAT1Q58HT5 328 aa4.02□□□□□ -1.77
CHD2-219ENST00000630016 ZNF549Q6P9A3 640 aa4.02□□□□□ -1.77
CHD2-219ENST00000630016 VSTM1Q6UX27 236 aa4.02□□□□□ -1.77
CHD2-219ENST00000630016 DCDC5Q6ZRR9 648 aa4.02□□□□□ -1.77
CHD2-219ENST00000630016 GAS2L3Q86XJ1 694 aa4.02□□□□□ -1.77
CHD2-219ENST00000630016 ADHFE1Q8IWW8 467 aa4.02□□□□□ -1.77
CHD2-219ENST00000630016 KRT78Q8N1N4 520 aa4.02□□□□□ -1.77
CHD2-219ENST00000630016 MPLKIPQ8TAP9 179 aa4.02□□□□□ -1.77
CHD2-219ENST00000630016 TMEM171Q8WVE6 324 aa4.02□□□□□ -1.77
CHD2-219ENST00000630016 HS6ST2Q96MM7 605 aa4.02□□□□□ -1.77
CHD2-219ENST00000630016 CTAGE1Q96RT6 745 aa4.02□□□□□ -1.77
CHD2-219ENST00000630016 SMAD5Q99717 465 aaKnown RBP4.02□□□□□ -1.77
CHD2-219ENST00000630016 SLC12A5Q9H2X9 1139 aa4.02□□□□□ -1.77
CHD2-219ENST00000630016 ZSCAN32Q9NX65 697 aa4.02□□□□□ -1.77
CHD2-219ENST00000630016 DDX56Q9NY93 547 aaKnown RBP4.02□□□□□ -1.77
CHD2-219ENST00000630016 SPEF1Q9Y4P9 236 aa4.02□□□□□ -1.77
CHD2-219ENST00000630016 UBR3Q6ZT12 1888 aa4.02□□□□□ -1.77
CHD2-219ENST00000630016 NCAPD2Q15021 1401 aa4.02□□□□□ -1.77
CHD2-219ENST00000630016 ROCK2O75116 1388 aaKnown RBP4.02□□□□□ -1.77
CHD2-219ENST00000630016 DOT1LQ8TEK3 1739 aa4.01□□□□□ -1.77
CHD2-219ENST00000630016 MEGF6O75095 1541 aa4.01□□□□□ -1.77
CHD2-219ENST00000630016 EME2A4GXA9 379 aaPredicted RBP4.01□□□□□ -1.77
CHD2-219ENST00000630016 LACTBL1A8MY62 500 aa4.01□□□□□ -1.77
CHD2-219ENST00000630016 FYB1O15117 783 aa4.01□□□□□ -1.77
CHD2-219ENST00000630016 IL33O95760 270 aa4.01□□□□□ -1.77
CHD2-219ENST00000630016 CTSAP10619 480 aa4.01□□□□□ -1.77
CHD2-219ENST00000630016 HSPA8P11142 646 aaKnown RBP4.01□□□□□ -1.77
CHD2-219ENST00000630016 APEHP13798 732 aaKnown RBP4.01□□□□□ -1.77
CHD2-219ENST00000630016 CDKN1CP49918 316 aaPredicted RBP4.01□□□□□ -1.77
CHD2-219ENST00000630016 ITPK1Q13572 414 aa4.01□□□□□ -1.77
CHD2-219ENST00000630016 KCNB1Q14721 858 aa4.01□□□□□ -1.77
CHD2-219ENST00000630016 PKN2Q16513 984 aaKnown RBP4.01□□□□□ -1.77
CHD2-219ENST00000630016 PLEKHG6Q3KR16 790 aa4.01□□□□□ -1.77
CHD2-219ENST00000630016 SLC9C1Q4G0N8 1177 aa4.01□□□□□ -1.77
CHD2-219ENST00000630016 TMEM240Q5SV17 173 aa4.01□□□□□ -1.77
CHD2-219ENST00000630016 CC2D1BQ5T0F9 858 aaKnown RBP4.01□□□□□ -1.77
CHD2-219ENST00000630016 UBAP2Q5T6F2 1119 aaKnown RBP4.01□□□□□ -1.77
CHD2-219ENST00000630016 LMBRD2Q68DH5 695 aaPredicted RBP4.01□□□□□ -1.77
CHD2-219ENST00000630016 NOL8Q76FK4 1167 aaKnown RBP4.01□□□□□ -1.77
CHD2-219ENST00000630016 SPARTQ8N0X7 666 aa4.01□□□□□ -1.77
CHD2-219ENST00000630016 CELF5Q8N6W0 485 aaKnown RBP4.01□□□□□ -1.77
CHD2-219ENST00000630016 BPIFB1Q8TDL5 484 aa4.01□□□□□ -1.77
CHD2-219ENST00000630016 MVB12AQ96EY5 273 aa4.01□□□□□ -1.77
CHD2-219ENST00000630016 LTV1Q96GA3 475 aaPredicted RBP4.01□□□□□ -1.77
CHD2-219ENST00000630016 TEX13AQ9BXU3 409 aaPredicted RBP4.01□□□□□ -1.77
CHD2-219ENST00000630016 PIH1D1Q9NWS0 290 aaKnown RBP4.01□□□□□ -1.77
CHD2-219ENST00000630016 NARFQ9UHQ1 456 aa4.01□□□□□ -1.77
CHD2-219ENST00000630016 CPA4Q9UI42 421 aa4.01□□□□□ -1.77
CHD2-219ENST00000630016 ASAP1Q9ULH1 1129 aa4.01□□□□□ -1.77
CHD2-219ENST00000630016 STXBP5LQ9Y2K9 1186 aa4.01□□□□□ -1.77
CHD2-219ENST00000630016 LTN1O94822 1766 aa4.01□□□□□ -1.77
CHD2-219ENST00000630016 C4AP0C0L4 1744 aa4.01□□□□□ -1.77
CHD2-219ENST00000630016 A0A1W2PP64 1363 aa4.01□□□□□ -1.77
CHD2-219ENST00000630016 BRCA1P38398 1863 aaKnown RBP4.01□□□□□ -1.77
CHD2-219ENST00000630016 KRT86O43790 486 aa4□□□□□ -1.77
CHD2-219ENST00000630016 MT3P25713 68 aa4□□□□□ -1.77
CHD2-219ENST00000630016 CCNIQ14094 377 aa4□□□□□ -1.77
CHD2-219ENST00000630016 KRT81Q14533 505 aa4□□□□□ -1.77
CHD2-219ENST00000630016 SEC23BQ15437 767 aa4□□□□□ -1.77
CHD2-219ENST00000630016 PLEKHO1Q53GL0 409 aaPredicted RBP4□□□□□ -1.77
CHD2-219ENST00000630016 RANBP10Q6VN20 620 aa4□□□□□ -1.77
CHD2-219ENST00000630016 C18orf65Q6ZTR6 163 aa4□□□□□ -1.77
CHD2-219ENST00000630016 SLC15A4Q8N697 577 aa4□□□□□ -1.77
CHD2-219ENST00000630016 LINC01465Q8N7H1 131 aa4□□□□□ -1.77
CHD2-219ENST00000630016 RBMXL3Q8N7X1 1067 aaKnown RBP4□□□□□ -1.77
CHD2-219ENST00000630016 MAFAQ8NHW3 353 aaPredicted RBP4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms