RNA–Protein interactions for RNA: ENST00000629427.2

SHPRH-211, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SHPRH, Length 7,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-211ENST00000629427 ATP6V1HQ9UI12 483 aa12.04□□□□□ -0.48
SHPRH-211ENST00000629427 SMNDC1O75940 238 aaKnown RBP eCLIP12.04□□□□□ -0.48
SHPRH-211ENST00000629427 KRT75O95678 551 aa12.04□□□□□ -0.48
SHPRH-211ENST00000629427 PSMC3P17980 439 aa12.04□□□□□ -0.48
SHPRH-211ENST00000629427 CRYMQ14894 314 aa12.04□□□□□ -0.48
SHPRH-211ENST00000629427 TLK2Q86UE8 772 aa12.04□□□□□ -0.48
SHPRH-211ENST00000629427 PTPRHQ9HD43 1115 aa12.04□□□□□ -0.48
SHPRH-211ENST00000629427 KLHL28Q9NXS3 571 aa12.04□□□□□ -0.48
SHPRH-211ENST00000629427 UXTQ9UBK9 157 aaPredicted RBP12.04□□□□□ -0.48
SHPRH-211ENST00000629427 PRKAG3Q9UGI9 489 aa12.04□□□□□ -0.48
SHPRH-211ENST00000629427 DNAJC16Q9Y2G8 782 aa12.04□□□□□ -0.48
SHPRH-211ENST00000629427 POLR1DQ9Y2S0 133 aa12.04□□□□□ -0.48
SHPRH-211ENST00000629427 BAIAP3O94812 1187 aa12.04□□□□□ -0.48
SHPRH-211ENST00000629427 HSPA13P48723 471 aa12.04□□□□□ -0.48
SHPRH-211ENST00000629427 RAB14P61106 215 aa12.04□□□□□ -0.48
SHPRH-211ENST00000629427 GMCL1P1Q8NEA9 526 aa12.04□□□□□ -0.48
SHPRH-211ENST00000629427 ADAM32Q8TC27 787 aa12.04□□□□□ -0.48
SHPRH-211ENST00000629427 SEMA4DQ92854 862 aa12.04□□□□□ -0.48
SHPRH-211ENST00000629427 HAO1Q9UJM8 370 aa12.04□□□□□ -0.48
SHPRH-211ENST00000629427 TSPAN16Q9UKR8 245 aa12.04□□□□□ -0.48
SHPRH-211ENST00000629427 TMX2Q9Y320 296 aa12.04□□□□□ -0.48
SHPRH-211ENST00000629427 RBAK-RBAKDNI3L0D1 243 aa12.03□□□□□ -0.48
SHPRH-211ENST00000629427 KLHL41O60662 606 aa12.03□□□□□ -0.48
SHPRH-211ENST00000629427 MTA2O94776 668 aa12.03□□□□□ -0.48
SHPRH-211ENST00000629427 RPN2P04844 631 aa12.03□□□□□ -0.48
SHPRH-211ENST00000629427 RRM1P23921 792 aa12.03□□□□□ -0.48
SHPRH-211ENST00000629427 CLK2P49760 499 aaKnown RBP12.03□□□□□ -0.48
SHPRH-211ENST00000629427 C1DQ13901 141 aaKnown RBP12.03□□□□□ -0.48
SHPRH-211ENST00000629427 AGKQ53H12 422 aa12.03□□□□□ -0.48
SHPRH-211ENST00000629427 PRR23CQ6ZRP0 262 aa12.03□□□□□ -0.48
SHPRH-211ENST00000629427 OR8H2Q8N162 312 aa12.03□□□□□ -0.48
SHPRH-211ENST00000629427 GMCL1Q96IK5 515 aa12.03□□□□□ -0.48
SHPRH-211ENST00000629427 COMMD8Q9NX08 183 aa12.03□□□□□ -0.48
SHPRH-211ENST00000629427 NCKIPSDQ9NZQ3 722 aa12.03□□□□□ -0.48
SHPRH-211ENST00000629427 SMIM22K7EJ46 135 aa12.03□□□□□ -0.48
SHPRH-211ENST00000629427 KPNA3O00505 521 aaPredicted RBP12.03□□□□□ -0.48
SHPRH-211ENST00000629427 OR56A5P0C7T3 313 aa12.03□□□□□ -0.48
SHPRH-211ENST00000629427 CCDC130P13994 396 aa12.03□□□□□ -0.48
SHPRH-211ENST00000629427 TAL1P17542 331 aaPredicted RBP12.03□□□□□ -0.48
SHPRH-211ENST00000629427 NLRP9Q7RTR0 991 aa12.03□□□□□ -0.48
SHPRH-211ENST00000629427 WDR36Q8NI36 951 aaKnown RBP12.03□□□□□ -0.48
SHPRH-211ENST00000629427 FAM120BQ96EK7 910 aaKnown RBP12.03□□□□□ -0.48
SHPRH-211ENST00000629427 DNAJC1Q96KC8 554 aaKnown RBP12.03□□□□□ -0.48
SHPRH-211ENST00000629427 A0A0A6YYK5 440 aaPredicted RBP12.03□□□□□ -0.48
SHPRH-211ENST00000629427 SARSP49591 514 aaKnown RBP12.03□□□□□ -0.48
SHPRH-211ENST00000629427 RAB27AP51159 221 aa12.03□□□□□ -0.48
SHPRH-211ENST00000629427 XRCC4Q13426 336 aa12.03□□□□□ -0.48
SHPRH-211ENST00000629427 PGM5Q15124 567 aa12.03□□□□□ -0.48
SHPRH-211ENST00000629427 MAGEB18Q96M61 343 aa12.03□□□□□ -0.48
SHPRH-211ENST00000629427 SPRTNQ9H040 489 aaPredicted RBP12.03□□□□□ -0.48
SHPRH-211ENST00000629427 ZMYM5Q9UJ78 669 aa12.03□□□□□ -0.48
SHPRH-211ENST00000629427 ST13P50502 369 aaKnown RBP12.03□□□□□ -0.48
SHPRH-211ENST00000629427 SEC24CP53992 1094 aa12.03□□□□□ -0.48
SHPRH-211ENST00000629427 EPHX4Q8IUS5 362 aa12.03□□□□□ -0.48
SHPRH-211ENST00000629427 SCUBE3Q8IX30 993 aa12.03□□□□□ -0.48
SHPRH-211ENST00000629427 LGI2Q8N0V4 545 aa12.03□□□□□ -0.48
SHPRH-211ENST00000629427 ASZ1Q8WWH4 475 aa12.03□□□□□ -0.48
SHPRH-211ENST00000629427 SOCS4Q8WXH5 440 aa12.03□□□□□ -0.48
SHPRH-211ENST00000629427 PACSIN1Q9BY11 444 aa12.03□□□□□ -0.48
SHPRH-211ENST00000629427 FAM220BPB1ANY3 271 aa12.03□□□□□ -0.48
SHPRH-211ENST00000629427 MPOP05164 745 aa12.03□□□□□ -0.48
SHPRH-211ENST00000629427 TPH1P17752 444 aa12.03□□□□□ -0.48
SHPRH-211ENST00000629427 MARSP56192 900 aaKnown RBP12.03□□□□□ -0.48
SHPRH-211ENST00000629427 VAC14Q08AM6 782 aa12.03□□□□□ -0.48
SHPRH-211ENST00000629427 GRIK3Q13003 919 aa12.03□□□□□ -0.48
SHPRH-211ENST00000629427 MAP1SQ66K74 1059 aaPredicted RBP12.03□□□□□ -0.48
SHPRH-211ENST00000629427 ZNF720Q7Z2F6 126 aa12.03□□□□□ -0.48
SHPRH-211ENST00000629427 GPR141Q7Z602 305 aa12.03□□□□□ -0.48
SHPRH-211ENST00000629427 DSG4Q86SJ6 1040 aa12.03□□□□□ -0.48
SHPRH-211ENST00000629427 C19orf18Q8NEA5 215 aa12.03□□□□□ -0.48
SHPRH-211ENST00000629427 UTP15Q8TED0 518 aaKnown RBP12.03□□□□□ -0.48
SHPRH-211ENST00000629427 RSPH1Q8WYR4 309 aa12.03□□□□□ -0.48
SHPRH-211ENST00000629427 ATP13A1Q9HD20 1204 aa12.03□□□□□ -0.48
SHPRH-211ENST00000629427 TRIM66O15016 1216 aa12.03□□□□□ -0.48
SHPRH-211ENST00000629427 LSM8O95777 96 aaKnown RBP12.03□□□□□ -0.48
SHPRH-211ENST00000629427 IGSF6O95976 241 aa12.03□□□□□ -0.48
SHPRH-211ENST00000629427 TGFB3P10600 412 aa12.03□□□□□ -0.48
SHPRH-211ENST00000629427 PABPC1P11940 636 aaKnown RBP12.03□□□□□ -0.48
SHPRH-211ENST00000629427 SLC39A12Q504Y0 691 aa12.03□□□□□ -0.48
SHPRH-211ENST00000629427 PDPK2PQ6A1A2 396 aa12.03□□□□□ -0.48
SHPRH-211ENST00000629427 SPOCD1Q6ZMY3 1216 aa12.03□□□□□ -0.48
SHPRH-211ENST00000629427 BNC2Q6ZN30 1099 aaPredicted RBP12.03□□□□□ -0.48
SHPRH-211ENST00000629427 TPGS1Q6ZTW0 290 aa12.03□□□□□ -0.48
SHPRH-211ENST00000629427 AKT1S1Q96B36 256 aa12.03□□□□□ -0.48
SHPRH-211ENST00000629427 ELMO3Q96BJ8 720 aa12.03□□□□□ -0.48
SHPRH-211ENST00000629427 EXO5Q9H790 373 aa12.03□□□□□ -0.48
SHPRH-211ENST00000629427 PIH1D1Q9NWS0 290 aaKnown RBP12.03□□□□□ -0.48
SHPRH-211ENST00000629427 ACOT9Q9Y305 439 aa12.03□□□□□ -0.48
SHPRH-211ENST00000629427 USP17L7P0C7H9 530 aa12.02□□□□□ -0.48
SHPRH-211ENST00000629427 BCL2L1Q07817 233 aa12.02□□□□□ -0.48
SHPRH-211ENST00000629427 FSCN1Q16658 493 aaKnown RBP12.02□□□□□ -0.48
SHPRH-211ENST00000629427 NEK10Q6ZWH5 1172 aa12.02□□□□□ -0.48
SHPRH-211ENST00000629427 SIX5Q8N196 739 aa12.02□□□□□ -0.48
SHPRH-211ENST00000629427 TAS1R2Q8TE23 839 aa12.02□□□□□ -0.48
SHPRH-211ENST00000629427 HDHD2Q9H0R4 259 aa12.02□□□□□ -0.48
SHPRH-211ENST00000629427 TBC1D3BA6NDS4 549 aa12.02□□□□□ -0.48
SHPRH-211ENST00000629427 CAPN15O75808 1086 aa12.02□□□□□ -0.48
SHPRH-211ENST00000629427 CYP2A6P11509 494 aaPredicted RBP12.02□□□□□ -0.48
SHPRH-211ENST00000629427 POLR2LP62875 67 aaKnown RBP12.02□□□□□ -0.48
SHPRH-211ENST00000629427 PALB2Q86YC2 1186 aa12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms