RNA–Protein interactions for RNA: ENST00000628915.2

R3HDM1-220, Transcript of R3H domain containing 1, humanhuman

TSL 5 BASIC

Gene R3HDM1, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-220ENST00000628915 TAGAPQ8N103 731 aa4□□□□□ -1.77
R3HDM1-220ENST00000628915 MREGQ8N565 214 aa4□□□□□ -1.77
R3HDM1-220ENST00000628915 C7orf31Q8N865 590 aa4□□□□□ -1.77
R3HDM1-220ENST00000628915 ZNF454Q8N9F8 522 aa4□□□□□ -1.77
R3HDM1-220ENST00000628915 KCTD6Q8NC69 237 aa4□□□□□ -1.77
R3HDM1-220ENST00000628915 FBXO15Q8NCQ5 510 aaPredicted RBP4□□□□□ -1.77
R3HDM1-220ENST00000628915 PSD4Q8NDX1 1056 aa4□□□□□ -1.77
R3HDM1-220ENST00000628915 VANGL1Q8TAA9 524 aaPredicted RBP4□□□□□ -1.77
R3HDM1-220ENST00000628915 RASSF5Q8WWW0 418 aa4□□□□□ -1.77
R3HDM1-220ENST00000628915 HDAC11Q96DB2 347 aa4□□□□□ -1.77
R3HDM1-220ENST00000628915 UHRF1Q96T88 793 aaPredicted RBP4□□□□□ -1.77
R3HDM1-220ENST00000628915 ASPSCR1Q9BZE9 553 aa4□□□□□ -1.77
R3HDM1-220ENST00000628915 SLC12A5Q9H2X9 1139 aa4□□□□□ -1.77
R3HDM1-220ENST00000628915 GHITMQ9H3K2 345 aa4□□□□□ -1.77
R3HDM1-220ENST00000628915 RIBC2Q9H4K1 309 aa4□□□□□ -1.77
R3HDM1-220ENST00000628915 TAF1DQ9H5J8 278 aaPredicted RBP4□□□□□ -1.77
R3HDM1-220ENST00000628915 TFB2MQ9H5Q4 396 aaKnown RBP4□□□□□ -1.77
R3HDM1-220ENST00000628915 EPS8L2Q9H6S3 715 aa4□□□□□ -1.77
R3HDM1-220ENST00000628915 PIDD1Q9HB75 910 aa4□□□□□ -1.77
R3HDM1-220ENST00000628915 UFSP2Q9NUQ7 469 aa4□□□□□ -1.77
R3HDM1-220ENST00000628915 NDUFA13Q9P0J0 144 aa4□□□□□ -1.77
R3HDM1-220ENST00000628915 LRFN1Q9P244 771 aa4□□□□□ -1.77
R3HDM1-220ENST00000628915 FAM153AQ9UHL3 310 aa4□□□□□ -1.77
R3HDM1-220ENST00000628915 DAPK2Q9UIK4 370 aa4□□□□□ -1.77
R3HDM1-220ENST00000628915 VAV3Q9UKW4 847 aa4□□□□□ -1.77
R3HDM1-220ENST00000628915 PCDHGC3Q9UN70 934 aa4□□□□□ -1.77
R3HDM1-220ENST00000628915 RBM8AQ9Y5S9 174 aaKnown RBP4□□□□□ -1.77
R3HDM1-220ENST00000628915 CEMIPQ8WUJ3 1361 aa4□□□□□ -1.77
R3HDM1-220ENST00000628915 A0A087WWV3 80 aa4□□□□□ -1.77
R3HDM1-220ENST00000628915 A0A0J9YVX5 310 aa4□□□□□ -1.77
R3HDM1-220ENST00000628915 ABHD14A-ACY1A0A1B0GW23 586 aa4□□□□□ -1.77
R3HDM1-220ENST00000628915 KANSL1LA0AUZ9 987 aa4□□□□□ -1.77
R3HDM1-220ENST00000628915 CFAP99D6REC4 459 aa4□□□□□ -1.77
R3HDM1-220ENST00000628915 DYNC1LI2O43237 492 aaPredicted RBP4□□□□□ -1.77
R3HDM1-220ENST00000628915 NTRK1P04629 796 aa4□□□□□ -1.77
R3HDM1-220ENST00000628915 RARBP10826 455 aa4□□□□□ -1.77
R3HDM1-220ENST00000628915 NQO1P15559 274 aaKnown RBP4□□□□□ -1.77
R3HDM1-220ENST00000628915 ATP6V1C1P21283 382 aa4□□□□□ -1.77
R3HDM1-220ENST00000628915 ADD1P35611 737 aaKnown RBP4□□□□□ -1.77
R3HDM1-220ENST00000628915 SLC15A1P46059 708 aa4□□□□□ -1.77
R3HDM1-220ENST00000628915 HDGFP51858 240 aaKnown RBP4□□□□□ -1.77
R3HDM1-220ENST00000628915 NKX2-5P52952 324 aaPredicted RBP4□□□□□ -1.77
R3HDM1-220ENST00000628915 PCDH1Q08174 1060 aa4□□□□□ -1.77
R3HDM1-220ENST00000628915 TRIP13Q15645 432 aaPredicted RBP4□□□□□ -1.77
R3HDM1-220ENST00000628915 UAP1Q16222 522 aaPredicted RBP4□□□□□ -1.77
R3HDM1-220ENST00000628915 ATAD3BQ5T9A4 648 aa4□□□□□ -1.77
R3HDM1-220ENST00000628915 ATG16L1Q676U5 607 aa4□□□□□ -1.77
R3HDM1-220ENST00000628915 ETFRF1Q6IPR1 90 aa4□□□□□ -1.77
R3HDM1-220ENST00000628915 TYW1BQ6NUM6 668 aa4□□□□□ -1.77
R3HDM1-220ENST00000628915 RAD9BQ6WBX8 426 aa4□□□□□ -1.77
R3HDM1-220ENST00000628915 KRT25Q7Z3Z0 450 aa4□□□□□ -1.77
R3HDM1-220ENST00000628915 HORMAD1Q86X24 394 aa4□□□□□ -1.77
R3HDM1-220ENST00000628915 KIF18BQ86Y91 864 aa4□□□□□ -1.77
R3HDM1-220ENST00000628915 HID1Q8IV36 788 aa4□□□□□ -1.77
R3HDM1-220ENST00000628915 NIM1KQ8IY84 436 aa4□□□□□ -1.77
R3HDM1-220ENST00000628915 DPP10Q8N608 796 aa4□□□□□ -1.77
R3HDM1-220ENST00000628915 LPCAT1Q8NF37 534 aa4□□□□□ -1.77
R3HDM1-220ENST00000628915 GIPC3Q8TF64 312 aa4□□□□□ -1.77
R3HDM1-220ENST00000628915 TGFBRAP1Q8WUH2 860 aa4□□□□□ -1.77
R3HDM1-220ENST00000628915 BTN2A2Q8WVV5 523 aa4□□□□□ -1.77
R3HDM1-220ENST00000628915 WASF1Q92558 559 aa4□□□□□ -1.77
R3HDM1-220ENST00000628915 SIPA1Q96FS4 1042 aa4□□□□□ -1.77
R3HDM1-220ENST00000628915 AHCYL2Q96HN2 611 aaKnown RBP4□□□□□ -1.77
R3HDM1-220ENST00000628915 DYDC2Q96IM9 177 aa4□□□□□ -1.77
R3HDM1-220ENST00000628915 SETDB2Q96T68 719 aa4□□□□□ -1.77
R3HDM1-220ENST00000628915 COPS4Q9BT78 406 aa4□□□□□ -1.77
R3HDM1-220ENST00000628915 CDADC1Q9BWV3 514 aa4□□□□□ -1.77
R3HDM1-220ENST00000628915 ROGDIQ9GZN7 287 aa4□□□□□ -1.77
R3HDM1-220ENST00000628915 DIABLOQ9NR28 239 aa4□□□□□ -1.77
R3HDM1-220ENST00000628915 GGA3Q9NZ52 723 aa4□□□□□ -1.77
R3HDM1-220ENST00000628915 VSX1Q9NZR4 365 aaPredicted RBP4□□□□□ -1.77
R3HDM1-220ENST00000628915 CYB5R1Q9UHQ9 305 aa4□□□□□ -1.77
R3HDM1-220ENST00000628915 NOD1Q9Y239 953 aa4□□□□□ -1.77
R3HDM1-220ENST00000628915 LRRC42Q9Y546 428 aa4□□□□□ -1.77
R3HDM1-220ENST00000628915 PCDHA5Q9Y5H7 936 aa4□□□□□ -1.77
R3HDM1-220ENST00000628915 SNX9Q9Y5X1 595 aa4□□□□□ -1.77
R3HDM1-220ENST00000628915 TNRQ92752 1358 aa4□□□□□ -1.77
R3HDM1-220ENST00000628915 MON2Q7Z3U7 1717 aa4□□□□□ -1.77
R3HDM1-220ENST00000628915 A0A1W2PRG6 482 aa3.99□□□□□ -1.77
R3HDM1-220ENST00000628915 K7EPI3 171 aa3.99□□□□□ -1.77
R3HDM1-220ENST00000628915 OPLAHO14841 1288 aa3.99□□□□□ -1.77
R3HDM1-220ENST00000628915 INPPL1O15357 1258 aa3.99□□□□□ -1.77
R3HDM1-220ENST00000628915 MFAP3LO75121 409 aa3.99□□□□□ -1.77
R3HDM1-220ENST00000628915 FGF18O76093 207 aa3.99□□□□□ -1.77
R3HDM1-220ENST00000628915 PLGP00747 810 aaPredicted RBP3.99□□□□□ -1.77
R3HDM1-220ENST00000628915 PAEPP09466 180 aa3.99□□□□□ -1.77
R3HDM1-220ENST00000628915 NCF1P14598 390 aaPredicted RBP3.99□□□□□ -1.77
R3HDM1-220ENST00000628915 GALP22466 123 aa3.99□□□□□ -1.77
R3HDM1-220ENST00000628915 RAD23BP54727 409 aa3.99□□□□□ -1.77
R3HDM1-220ENST00000628915 ARF3P61204 181 aaPredicted RBP3.99□□□□□ -1.77
R3HDM1-220ENST00000628915 NAA20P61599 178 aa3.99□□□□□ -1.77
R3HDM1-220ENST00000628915 TSPAN5P62079 268 aa3.99□□□□□ -1.77
R3HDM1-220ENST00000628915 HPCAP84074 193 aa3.99□□□□□ -1.77
R3HDM1-220ENST00000628915 ARF1P84077 181 aaKnown RBP3.99□□□□□ -1.77
R3HDM1-220ENST00000628915 ARHGAP4P98171 946 aa3.99□□□□□ -1.77
R3HDM1-220ENST00000628915 PLOD1Q02809 727 aaPredicted RBP3.99□□□□□ -1.77
R3HDM1-220ENST00000628915 LIPEQ05469 1076 aa3.99□□□□□ -1.77
R3HDM1-220ENST00000628915 NR1I3Q14994 352 aa3.99□□□□□ -1.77
R3HDM1-220ENST00000628915 GRIK4Q16099 956 aa3.99□□□□□ -1.77
R3HDM1-220ENST00000628915 KCNA10Q16322 511 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms