RNA–Protein interactions for RNA: ENST00000628516.1

LINC00628-201, long intergenic non-protein coding RNA 628, humanhuman

BASIC

Gene LINC00628, Length 1,289 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00628-201ENST00000628516 IGHV1OR15-9A0A0B4J2B8 117 aa17.14■□□□□ 0.33
LINC00628-201ENST00000628516 MSI1O43347 362 aaKnown RBP17.14■□□□□ 0.33
LINC00628-201ENST00000628516 TSPAN3O60637 253 aa17.14■□□□□ 0.33
LINC00628-201ENST00000628516 KCNK5O95279 499 aa17.14■□□□□ 0.33
LINC00628-201ENST00000628516 FGFR1OPO95684 399 aaKnown RBP17.14■□□□□ 0.33
LINC00628-201ENST00000628516 ITPKAP23677 461 aa17.14■□□□□ 0.33
LINC00628-201ENST00000628516 ERCC5P28715 1186 aaPredicted RBP17.14■□□□□ 0.33
LINC00628-201ENST00000628516 DPP6P42658 865 aa17.14■□□□□ 0.33
LINC00628-201ENST00000628516 IL12RB1P42701 662 aa17.14■□□□□ 0.33
LINC00628-201ENST00000628516 MARSP56192 900 aaKnown RBP17.14■□□□□ 0.33
LINC00628-201ENST00000628516 TYRO3Q06418 890 aa17.14■□□□□ 0.33
LINC00628-201ENST00000628516 MPPE1Q53F39 396 aa17.14■□□□□ 0.33
LINC00628-201ENST00000628516 KIAA1324Q6UXG2 1013 aaKnown RBP17.14■□□□□ 0.33
LINC00628-201ENST00000628516 C11orf57Q6ZUT1 292 aaPredicted RBP17.14■□□□□ 0.33
LINC00628-201ENST00000628516 IRGQQ8WZA9 623 aa17.14■□□□□ 0.33
LINC00628-201ENST00000628516 PIWIL1Q96J94 861 aaKnown RBP17.14■□□□□ 0.33
LINC00628-201ENST00000628516 MRGPRX1Q96LB2 322 aa17.14■□□□□ 0.33
LINC00628-201ENST00000628516 HSFY1Q96LI6 401 aa17.14■□□□□ 0.33
LINC00628-201ENST00000628516 THAP10Q9P2Z0 257 aaPredicted RBP17.14■□□□□ 0.33
LINC00628-201ENST00000628516 EVLQ9UI08 416 aaPredicted RBP17.14■□□□□ 0.33
LINC00628-201ENST00000628516 PLXND1Q9Y4D7 1925 aa17.13■□□□□ 0.33
LINC00628-201ENST00000628516 NPC1O15118 1278 aa17.13■□□□□ 0.33
LINC00628-201ENST00000628516 GABBR2O75899 941 aa17.13■□□□□ 0.33
LINC00628-201ENST00000628516 KRT5P13647 590 aa17.13■□□□□ 0.33
LINC00628-201ENST00000628516 ZNF132P52740 706 aa17.13■□□□□ 0.33
LINC00628-201ENST00000628516 LMAN2Q12907 356 aa17.13■□□□□ 0.33
LINC00628-201ENST00000628516 TPD52L1Q16890 204 aaPredicted RBP17.13■□□□□ 0.33
LINC00628-201ENST00000628516 N4BP2L1Q5TBK1 243 aaPredicted RBP17.13■□□□□ 0.33
LINC00628-201ENST00000628516 CREBRFQ8IUR6 639 aa17.13■□□□□ 0.33
LINC00628-201ENST00000628516 CLEC4CQ8WTT0 213 aa17.13■□□□□ 0.33
LINC00628-201ENST00000628516 GOLGA1Q92805 767 aa17.13■□□□□ 0.33
LINC00628-201ENST00000628516 KREMEN1Q96MU8 473 aa17.13■□□□□ 0.33
LINC00628-201ENST00000628516 SLC2A11Q9BYW1 496 aa17.13■□□□□ 0.33
LINC00628-201ENST00000628516 CIPCQ9C0C6 399 aa17.13■□□□□ 0.33
LINC00628-201ENST00000628516 INTS2Q9H0H0 1204 aaKnown RBP17.13■□□□□ 0.33
LINC00628-201ENST00000628516 CD93Q9NPY3 652 aa17.13■□□□□ 0.33
LINC00628-201ENST00000628516 ELOVL2Q9NXB9 296 aa17.13■□□□□ 0.33
LINC00628-201ENST00000628516 PILRBQ9UKJ0 227 aa17.13■□□□□ 0.33
LINC00628-201ENST00000628516 SYCE3A1L190 88 aa17.12■□□□□ 0.33
LINC00628-201ENST00000628516 CDX4O14627 284 aaPredicted RBP17.12■□□□□ 0.33
LINC00628-201ENST00000628516 SYNCRIPO60506 623 aaKnown RBP17.12■□□□□ 0.33
LINC00628-201ENST00000628516 FBXO21O94952 628 aa17.12■□□□□ 0.33
LINC00628-201ENST00000628516 LETM1O95202 739 aaPredicted RBP17.12■□□□□ 0.33
LINC00628-201ENST00000628516 LATS1O95835 1130 aa17.12■□□□□ 0.33
LINC00628-201ENST00000628516 LTFP02788 710 aa17.12■□□□□ 0.33
LINC00628-201ENST00000628516 HOXD9P28356 352 aaPredicted RBP17.12■□□□□ 0.33
LINC00628-201ENST00000628516 ZNF445P59923 1031 aa17.12■□□□□ 0.33
LINC00628-201ENST00000628516 ARID5AQ03989 594 aa17.12■□□□□ 0.33
LINC00628-201ENST00000628516 ZNF33AQ06730 810 aa17.12■□□□□ 0.33
LINC00628-201ENST00000628516 ZNF234Q14588 700 aa17.12■□□□□ 0.33
LINC00628-201ENST00000628516 EIF4HQ15056 248 aaKnown RBP17.12■□□□□ 0.33
LINC00628-201ENST00000628516 E2F5Q15329 346 aa17.12■□□□□ 0.33
LINC00628-201ENST00000628516 UAP1L1Q3KQV9 507 aa17.12■□□□□ 0.33
LINC00628-201ENST00000628516 FUT11Q495W5 492 aa17.12■□□□□ 0.33
LINC00628-201ENST00000628516 CT47A1Q5JQC4 288 aaPredicted RBP17.12■□□□□ 0.33
LINC00628-201ENST00000628516 ADGRF1Q5T601 910 aa17.12■□□□□ 0.33
LINC00628-201ENST00000628516 PSAPL1Q6NUJ1 521 aa17.12■□□□□ 0.33
LINC00628-201ENST00000628516 MSANTD2Q6P1R3 559 aa17.12■□□□□ 0.33
LINC00628-201ENST00000628516 SORCS1Q8WY21 1168 aa17.12■□□□□ 0.33
LINC00628-201ENST00000628516 TMA16Q96EY4 203 aaKnown RBP17.12■□□□□ 0.33
LINC00628-201ENST00000628516 MIS12Q9H081 205 aa17.12■□□□□ 0.33
LINC00628-201ENST00000628516 UBE2TQ9NPD8 197 aaPredicted RBP17.12■□□□□ 0.33
LINC00628-201ENST00000628516 ST7Q9NRC1 585 aa17.12■□□□□ 0.33
LINC00628-201ENST00000628516 STOML2Q9UJZ1 356 aa17.12■□□□□ 0.33
LINC00628-201ENST00000628516 TIMM44O43615 452 aa17.11■□□□□ 0.33
LINC00628-201ENST00000628516 NDUFS2O75306 463 aa17.11■□□□□ 0.33
LINC00628-201ENST00000628516 CFIP05156 583 aa17.11■□□□□ 0.33
LINC00628-201ENST00000628516 MAPK8P45983 427 aa17.11■□□□□ 0.33
LINC00628-201ENST00000628516 NOVA1P51513 510 aaKnown RBP17.11■□□□□ 0.33
LINC00628-201ENST00000628516 ENPP2Q13822 863 aa17.11■□□□□ 0.33
LINC00628-201ENST00000628516 PEAR1Q5VY43 1037 aaPredicted RBP17.11■□□□□ 0.33
LINC00628-201ENST00000628516 TMEM215Q68D42 235 aa17.11■□□□□ 0.33
LINC00628-201ENST00000628516 SLC23A3Q6PIS1 610 aa17.11■□□□□ 0.33
LINC00628-201ENST00000628516 UNC45BQ8IWX7 931 aa17.11■□□□□ 0.33
LINC00628-201ENST00000628516 CEP76Q8TAP6 659 aa17.11■□□□□ 0.33
LINC00628-201ENST00000628516 MKRN2Q9H000 416 aaKnown RBP17.11■□□□□ 0.33
LINC00628-201ENST00000628516 PRDM16Q9HAZ2 1276 aa17.11■□□□□ 0.33
LINC00628-201ENST00000628516 TNRC6BQ9UPQ9 1833 aaKnown RBP17.1■□□□□ 0.33
LINC00628-201ENST00000628516 NCAM1P13591 858 aa17.1■□□□□ 0.33
LINC00628-201ENST00000628516 ENGP17813 658 aa17.1■□□□□ 0.33
LINC00628-201ENST00000628516 HLA-FP30511 346 aa17.1■□□□□ 0.33
LINC00628-201ENST00000628516 HOXD12P35452 270 aa17.1■□□□□ 0.33
LINC00628-201ENST00000628516 GPD2P43304 727 aa17.1■□□□□ 0.33
LINC00628-201ENST00000628516 TBX4P57082 545 aa17.1■□□□□ 0.33
LINC00628-201ENST00000628516 DUOXA1Q1HG43 343 aa17.1■□□□□ 0.33
LINC00628-201ENST00000628516 ZSCAN23Q3MJ62 389 aa17.1■□□□□ 0.33
LINC00628-201ENST00000628516 NUGGCQ68CJ6 796 aa17.1■□□□□ 0.33
LINC00628-201ENST00000628516 SERPINA13PQ6UXR4 307 aa17.1■□□□□ 0.33
LINC00628-201ENST00000628516 TMPRSS6Q8IU80 811 aa17.1■□□□□ 0.33
LINC00628-201ENST00000628516 SLC41A1Q8IVJ1 513 aa17.1■□□□□ 0.33
LINC00628-201ENST00000628516 SCUBE3Q8IX30 993 aa17.1■□□□□ 0.33
LINC00628-201ENST00000628516 FAM149B1Q96BN6 582 aa17.1■□□□□ 0.33
LINC00628-201ENST00000628516 HSPA12BQ96MM6 686 aa17.1■□□□□ 0.33
LINC00628-201ENST00000628516 CRACR2AQ9BSW2 395 aa17.1■□□□□ 0.33
LINC00628-201ENST00000628516 THAP9Q9H5L6 903 aa17.1■□□□□ 0.33
LINC00628-201ENST00000628516 CNTN6Q9UQ52 1028 aa17.1■□□□□ 0.33
LINC00628-201ENST00000628516 GOLGA6L7A0A1B0GV03 622 aa17.09■□□□□ 0.33
LINC00628-201ENST00000628516 MED7O43513 233 aa17.09■□□□□ 0.33
LINC00628-201ENST00000628516 IGLV3-27P01718 113 aa17.09■□□□□ 0.33
LINC00628-201ENST00000628516 EPHX1P07099 455 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms