RNA–Protein interactions for RNA: ENST00000628397.2

CCDC163-205, Transcript of coiled-coil domain containing 163, humanhuman

TSL 3

Gene CCDC163, Length 885 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163-205ENST00000628397 KIF9Q9HAQ2 790 aa12.69□□□□□ -0.38
CCDC163-205ENST00000628397 GKN1Q9NS71 199 aa12.69□□□□□ -0.38
CCDC163-205ENST00000628397 TDP1Q9NUW8 608 aa12.69□□□□□ -0.38
CCDC163-205ENST00000628397 ARHGEF38Q9NXL2 777 aa12.69□□□□□ -0.38
CCDC163-205ENST00000628397 GDE1Q9NZC3 331 aa12.69□□□□□ -0.38
CCDC163-205ENST00000628397 CFAP97Q9P2B7 532 aa12.69□□□□□ -0.38
CCDC163-205ENST00000628397 AP4E1Q9UPM8 1137 aa12.69□□□□□ -0.38
CCDC163-205ENST00000628397 JRKLQ9Y4A0 524 aa12.69□□□□□ -0.38
CCDC163-205ENST00000628397 GRXCR2A6NFK2 248 aa12.68□□□□□ -0.38
CCDC163-205ENST00000628397 LEFTY2O00292 366 aa12.68□□□□□ -0.38
CCDC163-205ENST00000628397 ENC1O14682 589 aa12.68□□□□□ -0.38
CCDC163-205ENST00000628397 MBTPS2O43462 519 aa12.68□□□□□ -0.38
CCDC163-205ENST00000628397 PRAMEF12O95522 483 aa12.68□□□□□ -0.38
CCDC163-205ENST00000628397 ADRA1BP35368 520 aa12.68□□□□□ -0.38
CCDC163-205ENST00000628397 MARCKSL1P49006 195 aa12.68□□□□□ -0.38
CCDC163-205ENST00000628397 SLC11A2P49281 568 aa12.68□□□□□ -0.38
CCDC163-205ENST00000628397 ETF1P62495 437 aaKnown RBP12.68□□□□□ -0.38
CCDC163-205ENST00000628397 SCAPQ12770 1279 aa12.68□□□□□ -0.38
CCDC163-205ENST00000628397 USP4Q13107 963 aa12.68□□□□□ -0.38
CCDC163-205ENST00000628397 KRT81Q14533 505 aa12.68□□□□□ -0.38
CCDC163-205ENST00000628397 RPS6KA1Q15418 735 aa12.68□□□□□ -0.38
CCDC163-205ENST00000628397 BOLA3Q53S33 107 aa12.68□□□□□ -0.38
CCDC163-205ENST00000628397 KCNT1Q5JUK3 1230 aa12.68□□□□□ -0.38
CCDC163-205ENST00000628397 ERMARDQ5T6L9 678 aa12.68□□□□□ -0.38
CCDC163-205ENST00000628397 LRRC38Q5VT99 294 aa12.68□□□□□ -0.38
CCDC163-205ENST00000628397 TXNRD3NBQ6F5E7 133 aa12.68□□□□□ -0.38
CCDC163-205ENST00000628397 SYT10Q6XYQ8 523 aa12.68□□□□□ -0.38
CCDC163-205ENST00000628397 SH3RF2Q8TEC5 729 aa12.68□□□□□ -0.38
CCDC163-205ENST00000628397 KRT35Q92764 455 aa12.68□□□□□ -0.38
CCDC163-205ENST00000628397 SMARCD2Q92925 531 aa12.68□□□□□ -0.38
CCDC163-205ENST00000628397 USP13Q92995 863 aaPredicted RBP12.68□□□□□ -0.38
CCDC163-205ENST00000628397 CD101Q93033 1021 aa12.68□□□□□ -0.38
CCDC163-205ENST00000628397 ACSF2Q96CM8 615 aaPredicted RBP12.68□□□□□ -0.38
CCDC163-205ENST00000628397 HES6Q96HZ4 224 aa12.68□□□□□ -0.38
CCDC163-205ENST00000628397 BTN2A3PQ96KV6 586 aa12.68□□□□□ -0.38
CCDC163-205ENST00000628397 WDR24Q96S15 920 aa12.68□□□□□ -0.38
CCDC163-205ENST00000628397 MYADMQ96S97 322 aa12.68□□□□□ -0.38
CCDC163-205ENST00000628397 NAPGQ99747 312 aaPredicted RBP12.68□□□□□ -0.38
CCDC163-205ENST00000628397 DCLK3Q9C098 648 aa12.68□□□□□ -0.38
CCDC163-205ENST00000628397 DHX35Q9H5Z1 703 aaKnown RBP12.68□□□□□ -0.38
CCDC163-205ENST00000628397 TMPRSS4Q9NRS4 437 aa12.68□□□□□ -0.38
CCDC163-205ENST00000628397 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.68□□□□□ -0.38
CCDC163-205ENST00000628397 KLHL11Q9NVR0 708 aa12.68□□□□□ -0.38
CCDC163-205ENST00000628397 GPATCH2LQ9NWQ4 482 aa12.68□□□□□ -0.38
CCDC163-205ENST00000628397 DDX56Q9NY93 547 aaKnown RBP12.68□□□□□ -0.38
CCDC163-205ENST00000628397 DNAI1Q9UI46 699 aa12.68□□□□□ -0.38
CCDC163-205ENST00000628397 FZD10Q9ULW2 581 aa12.68□□□□□ -0.38
CCDC163-205ENST00000628397 CCL26Q9Y258 94 aa12.68□□□□□ -0.38
CCDC163-205ENST00000628397 ZFP37Q9Y6Q3 630 aaPredicted RBP12.68□□□□□ -0.38
CCDC163-205ENST00000628397 LRRD1A4D1F6 860 aa12.67□□□□□ -0.38
CCDC163-205ENST00000628397 CTAGE9A4FU28 777 aa12.67□□□□□ -0.38
CCDC163-205ENST00000628397 KCNU1A8MYU2 1149 aa12.67□□□□□ -0.38
CCDC163-205ENST00000628397 PAGE1O75459 146 aa12.67□□□□□ -0.38
CCDC163-205ENST00000628397 TUBB4AP04350 444 aa12.67□□□□□ -0.38
CCDC163-205ENST00000628397 ATP1A1P05023 1023 aaKnown RBP12.67□□□□□ -0.38
CCDC163-205ENST00000628397 RARAP10276 462 aa12.67□□□□□ -0.38
CCDC163-205ENST00000628397 SP100P23497 879 aaPredicted RBP12.67□□□□□ -0.38
CCDC163-205ENST00000628397 WEE1P30291 646 aa12.67□□□□□ -0.38
CCDC163-205ENST00000628397 CASQ1P31415 396 aa12.67□□□□□ -0.38
CCDC163-205ENST00000628397 RWDD2BP57060 319 aa12.67□□□□□ -0.38
CCDC163-205ENST00000628397 FAM78AQ5JUQ0 283 aa12.67□□□□□ -0.38
CCDC163-205ENST00000628397 CYP4V2Q6ZWL3 525 aaPredicted RBP12.67□□□□□ -0.38
CCDC163-205ENST00000628397 OTOP3Q7RTS5 596 aa12.67□□□□□ -0.38
CCDC163-205ENST00000628397 PSTKQ8IV42 348 aaKnown RBP12.67□□□□□ -0.38
CCDC163-205ENST00000628397 DENND1CQ8IV53 801 aa12.67□□□□□ -0.38
CCDC163-205ENST00000628397 CELF5Q8N6W0 485 aaKnown RBP12.67□□□□□ -0.38
CCDC163-205ENST00000628397 ADAMTS19Q8TE59 1207 aa12.67□□□□□ -0.38
CCDC163-205ENST00000628397 ASB16Q96NS5 453 aa12.67□□□□□ -0.38
CCDC163-205ENST00000628397 HAPLN3Q96S86 360 aa12.67□□□□□ -0.38
CCDC163-205ENST00000628397 ANLNQ9NQW6 1124 aa12.67□□□□□ -0.38
CCDC163-205ENST00000628397 PCDHA3Q9Y5H8 950 aa12.67□□□□□ -0.38
CCDC163-205ENST00000628397 BRWD1Q9NSI6 2320 aa12.66□□□□□ -0.38
CCDC163-205ENST00000628397 KIF26AQ9ULI4 1882 aaPredicted RBP12.66□□□□□ -0.38
CCDC163-205ENST00000628397 E2F8A0AVK6 867 aa12.66□□□□□ -0.38
CCDC163-205ENST00000628397 SCAMP3O14828 347 aaKnown RBP12.66□□□□□ -0.38
CCDC163-205ENST00000628397 DDX3YO15523 660 aaKnown RBP12.66□□□□□ -0.38
CCDC163-205ENST00000628397 ZNF500O60304 480 aaPredicted RBP12.66□□□□□ -0.38
CCDC163-205ENST00000628397 ACSL4O60488 711 aa12.66□□□□□ -0.38
CCDC163-205ENST00000628397 LATS1O95835 1130 aa12.66□□□□□ -0.38
CCDC163-205ENST00000628397 TCF3P15923 654 aa12.66□□□□□ -0.38
CCDC163-205ENST00000628397 GGCXP38435 758 aa12.66□□□□□ -0.38
CCDC163-205ENST00000628397 CDH6P55285 790 aa12.66□□□□□ -0.38
CCDC163-205ENST00000628397 ZXDBP98169 803 aa12.66□□□□□ -0.38
CCDC163-205ENST00000628397 ZNF77Q15935 545 aa12.66□□□□□ -0.38
CCDC163-205ENST00000628397 LEXMQ3ZCV2 418 aa12.66□□□□□ -0.38
CCDC163-205ENST00000628397 ATP13A4Q4VNC1 1196 aa12.66□□□□□ -0.38
CCDC163-205ENST00000628397 PPP6R3Q5H9R7 873 aaPredicted RBP12.66□□□□□ -0.38
CCDC163-205ENST00000628397 CHSY1Q86X52 802 aa12.66□□□□□ -0.38
CCDC163-205ENST00000628397 CCDC50Q8IVM0 306 aa12.66□□□□□ -0.38
CCDC163-205ENST00000628397 KATNAL2Q8IYT4 538 aa12.66□□□□□ -0.38
CCDC163-205ENST00000628397 TDRD5Q8NAT2 981 aaKnown RBP12.66□□□□□ -0.38
CCDC163-205ENST00000628397 KCTD6Q8NC69 237 aa12.66□□□□□ -0.38
CCDC163-205ENST00000628397 ZNF592Q92610 1267 aa12.66□□□□□ -0.38
CCDC163-205ENST00000628397 WBP2Q969T9 261 aa12.66□□□□□ -0.38
CCDC163-205ENST00000628397 RBM41Q96IZ5 413 aaKnown RBP12.66□□□□□ -0.38
CCDC163-205ENST00000628397 PSMB7Q99436 277 aa12.66□□□□□ -0.38
CCDC163-205ENST00000628397 DDX50Q9BQ39 737 aaKnown RBP12.66□□□□□ -0.38
CCDC163-205ENST00000628397 TLR10Q9BXR5 811 aa12.66□□□□□ -0.38
CCDC163-205ENST00000628397 CALN1Q9BXU9 219 aa12.66□□□□□ -0.38
CCDC163-205ENST00000628397 SIK2Q9H0K1 926 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms