RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 TRIP4Q15650 581 aaPredicted RBP13.12□□□□□ -0.31
SCN8A-209ENST00000627620 GRTP1Q5TC63 336 aa13.12□□□□□ -0.31
SCN8A-209ENST00000627620 KHDRBS2Q5VWX1 349 aaKnown RBP13.12□□□□□ -0.31
SCN8A-209ENST00000627620 TAF2Q6P1X5 1199 aa13.12□□□□□ -0.31
SCN8A-209ENST00000627620 CYP4Z1Q86W10 505 aa13.12□□□□□ -0.31
SCN8A-209ENST00000627620 KCNMB4Q86W47 210 aa13.12□□□□□ -0.31
SCN8A-209ENST00000627620 DEFB106AQ8N104 65 aa13.12□□□□□ -0.31
SCN8A-209ENST00000627620 SERPINB11Q96P15 392 aa13.12□□□□□ -0.31
SCN8A-209ENST00000627620 FUCA2Q9BTY2 467 aa13.12□□□□□ -0.31
SCN8A-209ENST00000627620 DMAP1Q9NPF5 467 aaPredicted RBP13.12□□□□□ -0.31
SCN8A-209ENST00000627620 PIH1D1Q9NWS0 290 aaKnown RBP13.12□□□□□ -0.31
SCN8A-209ENST00000627620 SMPD4Q9NXE4 827 aa13.12□□□□□ -0.31
SCN8A-209ENST00000627620 IFNA14P01570 189 aa13.12□□□□□ -0.31
SCN8A-209ENST00000627620 AKR1A1P14550 325 aa13.12□□□□□ -0.31
SCN8A-209ENST00000627620 SLC2A4P14672 509 aa13.12□□□□□ -0.31
SCN8A-209ENST00000627620 H2AFXP16104 143 aaPredicted RBP13.12□□□□□ -0.31
SCN8A-209ENST00000627620 MGAT1P26572 445 aa13.12□□□□□ -0.31
SCN8A-209ENST00000627620 CNTN2Q02246 1040 aa13.12□□□□□ -0.31
SCN8A-209ENST00000627620 ZNF410Q86VK4 478 aa13.12□□□□□ -0.31
SCN8A-209ENST00000627620 NFKBIZQ9BYH8 718 aa13.12□□□□□ -0.31
SCN8A-209ENST00000627620 KCNQ5Q9NR82 932 aa13.12□□□□□ -0.31
SCN8A-209ENST00000627620 IFRD1O00458 451 aaPredicted RBP13.12□□□□□ -0.31
SCN8A-209ENST00000627620 PAEPP09466 180 aa13.12□□□□□ -0.31
SCN8A-209ENST00000627620 PSMC3P17980 439 aa13.12□□□□□ -0.31
SCN8A-209ENST00000627620 PGAM1P18669 254 aa13.12□□□□□ -0.31
SCN8A-209ENST00000627620 YWHAQP27348 245 aa13.12□□□□□ -0.31
SCN8A-209ENST00000627620 CCDC157Q569K6 752 aa13.12□□□□□ -0.31
SCN8A-209ENST00000627620 DTNBP1Q96EV8 351 aa13.12□□□□□ -0.31
SCN8A-209ENST00000627620 ZBTB45Q96K62 511 aaPredicted RBP13.12□□□□□ -0.31
SCN8A-209ENST00000627620 PDP2Q9P2J9 529 aa13.12□□□□□ -0.31
SCN8A-209ENST00000627620 POLG2Q9UHN1 485 aa13.12□□□□□ -0.31
SCN8A-209ENST00000627620 ACADMP11310 421 aa13.12□□□□□ -0.31
SCN8A-209ENST00000627620 PSMA3P25788 255 aa13.12□□□□□ -0.31
SCN8A-209ENST00000627620 SLC9A5Q14940 896 aa13.12□□□□□ -0.31
SCN8A-209ENST00000627620 CBWD3Q5JTY5 395 aa13.12□□□□□ -0.31
SCN8A-209ENST00000627620 CBWD5Q5RIA9 395 aa13.12□□□□□ -0.31
SCN8A-209ENST00000627620 FBXL16Q8N461 479 aa13.12□□□□□ -0.31
SCN8A-209ENST00000627620 FAM120BQ96EK7 910 aaKnown RBP13.12□□□□□ -0.31
SCN8A-209ENST00000627620 RPS6KB2Q9UBS0 482 aa13.12□□□□□ -0.31
SCN8A-209ENST00000627620 PCDHA3Q9Y5H8 950 aa13.12□□□□□ -0.31
SCN8A-209ENST00000627620 UBXN8O00124 270 aa13.11□□□□□ -0.31
SCN8A-209ENST00000627620 EML1O00423 815 aa13.11□□□□□ -0.31
SCN8A-209ENST00000627620 ERVK-10P10266 1014 aa13.11□□□□□ -0.31
SCN8A-209ENST00000627620 VEGFAP15692 232 aaPredicted RBP13.11□□□□□ -0.31
SCN8A-209ENST00000627620 GP5P40197 560 aa13.11□□□□□ -0.31
SCN8A-209ENST00000627620 NR2C2P49116 596 aa13.11□□□□□ -0.31
SCN8A-209ENST00000627620 SARSP49591 514 aaKnown RBP13.11□□□□□ -0.31
SCN8A-209ENST00000627620 PPATQ06203 517 aa13.11□□□□□ -0.31
SCN8A-209ENST00000627620 MFSD7Q6UXD7 560 aa13.11□□□□□ -0.31
SCN8A-209ENST00000627620 ZNF438Q7Z4V0 828 aa13.11□□□□□ -0.31
SCN8A-209ENST00000627620 HOMEZQ8IX15 550 aa13.11□□□□□ -0.31
SCN8A-209ENST00000627620 OSBPL10Q9BXB5 764 aa13.11□□□□□ -0.31
SCN8A-209ENST00000627620 CD248Q9HCU0 757 aa13.11□□□□□ -0.31
SCN8A-209ENST00000627620 GSTM1P09488 218 aa13.11□□□□□ -0.31
SCN8A-209ENST00000627620 HPGDP15428 266 aa13.11□□□□□ -0.31
SCN8A-209ENST00000627620 SLC1A6P48664 564 aa13.11□□□□□ -0.31
SCN8A-209ENST00000627620 SLC6A3Q01959 620 aa13.11□□□□□ -0.31
SCN8A-209ENST00000627620 ANKS6Q68DC2 871 aa13.11□□□□□ -0.31
SCN8A-209ENST00000627620 GPR141Q7Z602 305 aa13.11□□□□□ -0.31
SCN8A-209ENST00000627620 PRKD2Q9BZL6 878 aa13.11□□□□□ -0.31
SCN8A-209ENST00000627620 PIF1Q9H611 641 aa13.11□□□□□ -0.31
SCN8A-209ENST00000627620 PARVBQ9HBI1 364 aa13.11□□□□□ -0.31
SCN8A-209ENST00000627620 MIEF1Q9NQG6 463 aa13.11□□□□□ -0.31
SCN8A-209ENST00000627620 XPNPEP3Q9NQH7 507 aa13.11□□□□□ -0.31
SCN8A-209ENST00000627620 LRRC4BQ9NT99 713 aa13.11□□□□□ -0.31
SCN8A-209ENST00000627620 TRHDEQ9UKU6 1024 aa13.11□□□□□ -0.31
SCN8A-209ENST00000627620 COPG1Q9Y678 874 aaKnown RBP13.11□□□□□ -0.31
SCN8A-209ENST00000627620 RBAK-RBAKDNI3L0D1 243 aa13.11□□□□□ -0.31
SCN8A-209ENST00000627620 KIF1CO43896 1103 aaKnown RBP13.11□□□□□ -0.31
SCN8A-209ENST00000627620 KRT6AP02538 564 aa13.11□□□□□ -0.31
SCN8A-209ENST00000627620 KRT6BP04259 564 aa13.11□□□□□ -0.31
SCN8A-209ENST00000627620 RPL21P46778 160 aaKnown RBP13.11□□□□□ -0.31
SCN8A-209ENST00000627620 KRT6CP48668 564 aa13.11□□□□□ -0.31
SCN8A-209ENST00000627620 NPY2RP49146 381 aa13.11□□□□□ -0.31
SCN8A-209ENST00000627620 ANGPT1Q15389 498 aa13.11□□□□□ -0.31
SCN8A-209ENST00000627620 TRMT11Q7Z4G4 463 aaKnown RBP13.11□□□□□ -0.31
SCN8A-209ENST00000627620 MED8Q96G25 268 aa13.11□□□□□ -0.31
SCN8A-209ENST00000627620 DUSP9Q99956 384 aaKnown RBP13.11□□□□□ -0.31
SCN8A-209ENST00000627620 KCTD14Q9BQ13 255 aaPredicted RBP13.11□□□□□ -0.31
SCN8A-209ENST00000627620 CYP39A1Q9NYL5 469 aa13.11□□□□□ -0.31
SCN8A-209ENST00000627620 ADM5C9JUS6 153 aa13.11□□□□□ -0.31
SCN8A-209ENST00000627620 KATNA1O75449 491 aa13.11□□□□□ -0.31
SCN8A-209ENST00000627620 KLRC2P26717 231 aa13.11□□□□□ -0.31
SCN8A-209ENST00000627620 PSEN2P49810 448 aa13.11□□□□□ -0.31
SCN8A-209ENST00000627620 TGM3Q08188 693 aa13.11□□□□□ -0.31
SCN8A-209ENST00000627620 MTA1Q13330 715 aa13.11□□□□□ -0.31
SCN8A-209ENST00000627620 KPNB1Q14974 876 aaKnown RBP13.11□□□□□ -0.31
SCN8A-209ENST00000627620 APOBEC3HQ6NTF7 200 aaKnown RBP13.11□□□□□ -0.31
SCN8A-209ENST00000627620 NT5DC4Q86YG4 428 aa13.11□□□□□ -0.31
SCN8A-209ENST00000627620 MAP4K3Q8IVH8 894 aa13.11□□□□□ -0.31
SCN8A-209ENST00000627620 CATSPER2Q96P56 530 aa13.11□□□□□ -0.31
SCN8A-209ENST00000627620 IDI2Q9BXS1 227 aa13.11□□□□□ -0.31
SCN8A-209ENST00000627620 ANKZF1Q9H8Y5 726 aa13.11□□□□□ -0.31
SCN8A-209ENST00000627620 TCF7L2Q9NQB0 619 aa13.11□□□□□ -0.31
SCN8A-209ENST00000627620 RGS18Q9NS28 235 aa13.11□□□□□ -0.31
SCN8A-209ENST00000627620 MANSC4A6NHS7 340 aaPredicted RBP13.11□□□□□ -0.31
SCN8A-209ENST00000627620 DDX3XO00571 662 aaKnown RBP eCLIP13.11□□□□□ -0.31
SCN8A-209ENST00000627620 RARAP10276 462 aa13.11□□□□□ -0.31
SCN8A-209ENST00000627620 PECAM1P16284 738 aaPredicted RBP13.11□□□□□ -0.31
SCN8A-209ENST00000627620 CYP2A7P20853 494 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms