RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 PRSS55Q6UWB4 352 aaPredicted RBP9.88□□□□□ -0.83
PDLIM5-223ENST00000627587 TMC5Q6UXY8 1006 aa9.88□□□□□ -0.83
PDLIM5-223ENST00000627587 GPR65Q8IYL9 337 aa9.88□□□□□ -0.83
PDLIM5-223ENST00000627587 SCML4Q8N228 414 aa9.88□□□□□ -0.83
PDLIM5-223ENST00000627587 FAM71BQ8TC56 605 aa9.88□□□□□ -0.83
PDLIM5-223ENST00000627587 CASKIN2Q8WXE0 1202 aa9.88□□□□□ -0.83
PDLIM5-223ENST00000627587 MAGOHBQ96A72 148 aaKnown RBP9.88□□□□□ -0.83
PDLIM5-223ENST00000627587 FUBP3Q96I24 572 aaKnown RBP eCLIP9.88□□□□□ -0.83
PDLIM5-223ENST00000627587 FAM118BQ9BPY3 351 aa9.88□□□□□ -0.83
PDLIM5-223ENST00000627587 TRIM51Q9BSJ1 452 aa9.88□□□□□ -0.83
PDLIM5-223ENST00000627587 SNRNP25Q9BV90 132 aaKnown RBP9.88□□□□□ -0.83
PDLIM5-223ENST00000627587 DCLK3Q9C098 648 aa9.88□□□□□ -0.83
PDLIM5-223ENST00000627587 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.88□□□□□ -0.83
PDLIM5-223ENST00000627587 GPATCH2LQ9NWQ4 482 aa9.88□□□□□ -0.83
PDLIM5-223ENST00000627587 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.88□□□□□ -0.83
PDLIM5-223ENST00000627587 NAALADL1Q9UQQ1 740 aa9.88□□□□□ -0.83
PDLIM5-223ENST00000627587 WDFY4Q6ZS81 3184 aa9.87□□□□□ -0.83
PDLIM5-223ENST00000627587 SASH3O75995 380 aa9.87□□□□□ -0.83
PDLIM5-223ENST00000627587 ZBED1O96006 694 aa9.87□□□□□ -0.83
PDLIM5-223ENST00000627587 ASGR2P07307 311 aa9.87□□□□□ -0.83
PDLIM5-223ENST00000627587 ADH1AP07327 375 aa9.87□□□□□ -0.83
PDLIM5-223ENST00000627587 AOC1P19801 751 aa9.87□□□□□ -0.83
PDLIM5-223ENST00000627587 NOS2P35228 1153 aa9.87□□□□□ -0.83
PDLIM5-223ENST00000627587 COILP38432 576 aaPredicted RBP9.87□□□□□ -0.83
PDLIM5-223ENST00000627587 CLCN4P51793 760 aa9.87□□□□□ -0.83
PDLIM5-223ENST00000627587 SLC5A3P53794 718 aa9.87□□□□□ -0.83
PDLIM5-223ENST00000627587 GUCY2DQ02846 1103 aa9.87□□□□□ -0.83
PDLIM5-223ENST00000627587 MMRN1Q13201 1228 aa9.87□□□□□ -0.83
PDLIM5-223ENST00000627587 DPYSL3Q14195 570 aa9.87□□□□□ -0.83
PDLIM5-223ENST00000627587 DCAF6Q58WW2 860 aa9.87□□□□□ -0.83
PDLIM5-223ENST00000627587 SCYL2Q6P3W7 929 aa9.87□□□□□ -0.83
PDLIM5-223ENST00000627587 CCDC137Q6PK04 289 aaKnown RBP9.87□□□□□ -0.83
PDLIM5-223ENST00000627587 TMCO3Q6UWJ1 677 aa9.87□□□□□ -0.83
PDLIM5-223ENST00000627587 ANKS3Q6ZW76 656 aa9.87□□□□□ -0.83
PDLIM5-223ENST00000627587 DDX42Q86XP3 938 aaKnown RBP eCLIP9.87□□□□□ -0.83
PDLIM5-223ENST00000627587 CCDC185Q8N715 623 aa9.87□□□□□ -0.83
PDLIM5-223ENST00000627587 ATAD1Q8NBU5 361 aa9.87□□□□□ -0.83
PDLIM5-223ENST00000627587 AENQ8WTP8 325 aaKnown RBP9.87□□□□□ -0.83
PDLIM5-223ENST00000627587 TEKT4Q8WW24 435 aa9.87□□□□□ -0.83
PDLIM5-223ENST00000627587 AUTS2Q8WXX7 1259 aa9.87□□□□□ -0.83
PDLIM5-223ENST00000627587 HSPH1Q92598 858 aa9.87□□□□□ -0.83
PDLIM5-223ENST00000627587 RUNDC3BQ96NL0 473 aa9.87□□□□□ -0.83
PDLIM5-223ENST00000627587 PGLYRP2Q96PD5 576 aa9.87□□□□□ -0.83
PDLIM5-223ENST00000627587 TTPALQ9BTX7 342 aa9.87□□□□□ -0.83
PDLIM5-223ENST00000627587 OXCT2Q9BYC2 517 aaPredicted RBP9.87□□□□□ -0.83
PDLIM5-223ENST00000627587 POPDC2Q9HBU9 364 aa9.87□□□□□ -0.83
PDLIM5-223ENST00000627587 EPB41L5Q9HCM4 733 aa9.87□□□□□ -0.83
PDLIM5-223ENST00000627587 ANLNQ9NQW6 1124 aa9.87□□□□□ -0.83
PDLIM5-223ENST00000627587 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.87□□□□□ -0.83
PDLIM5-223ENST00000627587 ABI2Q9NYB9 513 aaPredicted RBP9.87□□□□□ -0.83
PDLIM5-223ENST00000627587 WNT16Q9UBV4 365 aa9.87□□□□□ -0.83
PDLIM5-223ENST00000627587 STAP1Q9ULZ2 295 aa9.87□□□□□ -0.83
PDLIM5-223ENST00000627587 DUSP12Q9UNI6 340 aa9.87□□□□□ -0.83
PDLIM5-223ENST00000627587 NEU2Q9Y3R4 380 aa9.87□□□□□ -0.83
PDLIM5-223ENST00000627587 CACNA1HO95180 2353 aa9.87□□□□□ -0.83
PDLIM5-223ENST00000627587 ZFHX2Q9C0A1 2572 aaPredicted RBP9.87□□□□□ -0.83
PDLIM5-223ENST00000627587 MTMR11A4FU01 709 aa9.87□□□□□ -0.83
PDLIM5-223ENST00000627587 H7C4K7 107 aa9.87□□□□□ -0.83
PDLIM5-223ENST00000627587 CAPN9O14815 690 aa9.87□□□□□ -0.83
PDLIM5-223ENST00000627587 MDM4O15151 490 aa9.87□□□□□ -0.83
PDLIM5-223ENST00000627587 TP73O15350 636 aa9.87□□□□□ -0.83
PDLIM5-223ENST00000627587 TJP3O95049 919 aa9.87□□□□□ -0.83
PDLIM5-223ENST00000627587 LTFP02788 710 aa9.87□□□□□ -0.83
PDLIM5-223ENST00000627587 SOD2P04179 222 aa9.87□□□□□ -0.83
PDLIM5-223ENST00000627587 CPB1P15086 417 aa9.87□□□□□ -0.83
PDLIM5-223ENST00000627587 GRIK1P39086 918 aa9.87□□□□□ -0.83
PDLIM5-223ENST00000627587 DR1Q01658 176 aa9.87□□□□□ -0.83
PDLIM5-223ENST00000627587 EIF4EBP2Q13542 120 aaPredicted RBP9.87□□□□□ -0.83
PDLIM5-223ENST00000627587 DHX34Q14147 1143 aaKnown RBP9.87□□□□□ -0.83
PDLIM5-223ENST00000627587 MAP9Q49MG5 647 aa9.87□□□□□ -0.83
PDLIM5-223ENST00000627587 BOLA3Q53S33 107 aa9.87□□□□□ -0.83
PDLIM5-223ENST00000627587 SDHAF4Q5VUM1 108 aa9.87□□□□□ -0.83
PDLIM5-223ENST00000627587 KAZNQ674X7 775 aa9.87□□□□□ -0.83
PDLIM5-223ENST00000627587 DUPD1Q68J44 220 aa9.87□□□□□ -0.83
PDLIM5-223ENST00000627587 RNF19BQ6ZMZ0 732 aa9.87□□□□□ -0.83
PDLIM5-223ENST00000627587 STRADAQ7RTN6 431 aa9.87□□□□□ -0.83
PDLIM5-223ENST00000627587 ASCL5Q7RTU5 278 aa9.87□□□□□ -0.83
PDLIM5-223ENST00000627587 ERMP1Q7Z2K6 904 aa9.87□□□□□ -0.83
PDLIM5-223ENST00000627587 JAMLQ86YT9 394 aa9.87□□□□□ -0.83
PDLIM5-223ENST00000627587 IFT20Q8IY31 132 aa9.87□□□□□ -0.83
PDLIM5-223ENST00000627587 CCDC105Q8IYK2 499 aa9.87□□□□□ -0.83
PDLIM5-223ENST00000627587 KCTD6Q8NC69 237 aa9.87□□□□□ -0.83
PDLIM5-223ENST00000627587 FLCNQ8NFG4 579 aa9.87□□□□□ -0.83
PDLIM5-223ENST00000627587 SLCO2A1Q92959 643 aa9.87□□□□□ -0.83
PDLIM5-223ENST00000627587 HERC2P3Q9BVR0 1158 aa9.87□□□□□ -0.83
PDLIM5-223ENST00000627587 NEUROG2Q9H2A3 272 aa9.87□□□□□ -0.83
PDLIM5-223ENST00000627587 KCNK12Q9HB15 430 aa9.87□□□□□ -0.83
PDLIM5-223ENST00000627587 WDR6Q9NNW5 1121 aaKnown RBP9.87□□□□□ -0.83
PDLIM5-223ENST00000627587 ARFGAP3Q9NP61 516 aa9.87□□□□□ -0.83
PDLIM5-223ENST00000627587 TMPRSS4Q9NRS4 437 aa9.87□□□□□ -0.83
PDLIM5-223ENST00000627587 HOMER3Q9NSC5 361 aa9.87□□□□□ -0.83
PDLIM5-223ENST00000627587 PIGVQ9NUD9 493 aa9.87□□□□□ -0.83
PDLIM5-223ENST00000627587 CDH22Q9UJ99 828 aa9.87□□□□□ -0.83
PDLIM5-223ENST00000627587 FBXL21Q9UKT6 434 aa9.87□□□□□ -0.83
PDLIM5-223ENST00000627587 EFR3BQ9Y2G0 817 aa9.87□□□□□ -0.83
PDLIM5-223ENST00000627587 PCDHB5Q9Y5E4 795 aa9.87□□□□□ -0.83
PDLIM5-223ENST00000627587 ANAPC1Q9H1A4 1944 aa9.86□□□□□ -0.83
PDLIM5-223ENST00000627587 OBSL1O75147 1896 aa9.86□□□□□ -0.83
PDLIM5-223ENST00000627587 SOAT2O75908 522 aa9.86□□□□□ -0.83
PDLIM5-223ENST00000627587 URODP06132 367 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms