RNA–Protein interactions for RNA: ENST00000625299.1

PNKP-218, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 428 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-218ENST00000625299 MORC2Q9Y6X9 1032 aaPredicted RBP15.39■□□□□ 0.05
PNKP-218ENST00000625299 SLC12A8A0AV02 714 aa15.38■□□□□ 0.05
PNKP-218ENST00000625299 SPTLC2O15270 562 aa15.38■□□□□ 0.05
PNKP-218ENST00000625299 TSPAN3O60637 253 aa15.38■□□□□ 0.05
PNKP-218ENST00000625299 RPN1P04843 607 aaKnown RBP15.38■□□□□ 0.05
PNKP-218ENST00000625299 ITPKBP27987 946 aa15.38■□□□□ 0.05
PNKP-218ENST00000625299 NASPP49321 788 aaPredicted RBP15.38■□□□□ 0.05
PNKP-218ENST00000625299 CLDN10P78369 228 aa15.38■□□□□ 0.05
PNKP-218ENST00000625299 EHHADHQ08426 723 aa15.38■□□□□ 0.05
PNKP-218ENST00000625299 CUL4AQ13619 759 aa15.38■□□□□ 0.05
PNKP-218ENST00000625299 PTPRNQ16849 979 aa15.38■□□□□ 0.05
PNKP-218ENST00000625299 ZACNQ401N2 412 aa15.38■□□□□ 0.05
PNKP-218ENST00000625299 ERICH6BQ5W0A0 696 aa15.38■□□□□ 0.05
PNKP-218ENST00000625299 CNNM4Q6P4Q7 775 aa15.38■□□□□ 0.05
PNKP-218ENST00000625299 GOLGA5Q8TBA6 731 aa15.38■□□□□ 0.05
PNKP-218ENST00000625299 TAF4BQ92750 862 aa15.38■□□□□ 0.05
PNKP-218ENST00000625299 BTBD1Q9H0C5 482 aa15.38■□□□□ 0.05
PNKP-218ENST00000625299 PNPLA8Q9NP80 782 aa15.38■□□□□ 0.05
PNKP-218ENST00000625299 CLIC5Q9NZA1 410 aa15.38■□□□□ 0.05
PNKP-218ENST00000625299 MARCH2Q9P0N8 246 aa15.38■□□□□ 0.05
PNKP-218ENST00000625299 STRIP2Q9ULQ0 834 aa15.38■□□□□ 0.05
PNKP-218ENST00000625299 MUC22E2RYF6 1773 aaPredicted RBP15.37■□□□□ 0.05
PNKP-218ENST00000625299 ASS1P00966 412 aaKnown RBP15.37■□□□□ 0.05
PNKP-218ENST00000625299 HLA-DRAP01903 254 aa15.37■□□□□ 0.05
PNKP-218ENST00000625299 DNTTP04053 509 aa15.37■□□□□ 0.05
PNKP-218ENST00000625299 AFMP43652 599 aa15.37■□□□□ 0.05
PNKP-218ENST00000625299 BCAT1P54687 386 aa15.37■□□□□ 0.05
PNKP-218ENST00000625299 C21orf59P57076 290 aa15.37■□□□□ 0.05
PNKP-218ENST00000625299 CAMK2GQ13555 558 aaPredicted RBP15.37■□□□□ 0.05
PNKP-218ENST00000625299 KCNT1Q5JUK3 1230 aa15.37■□□□□ 0.05
PNKP-218ENST00000625299 CEP135Q66GS9 1140 aa15.37■□□□□ 0.05
PNKP-218ENST00000625299 SV2AQ7L0J3 742 aa15.37■□□□□ 0.05
PNKP-218ENST00000625299 RBBP8NLQ8NC74 664 aaPredicted RBP15.37■□□□□ 0.05
PNKP-218ENST00000625299 LINC00301Q8NCQ3 95 aa15.37■□□□□ 0.05
PNKP-218ENST00000625299 SLC39A7Q92504 469 aa15.37■□□□□ 0.05
PNKP-218ENST00000625299 NXPE2Q96DL1 559 aa15.37■□□□□ 0.05
PNKP-218ENST00000625299 ARID3AQ99856 593 aa15.37■□□□□ 0.05
PNKP-218ENST00000625299 IMPG2Q9BZV3 1241 aa15.37■□□□□ 0.05
PNKP-218ENST00000625299 FOXD4L1Q9NU39 408 aa15.37■□□□□ 0.05
PNKP-218ENST00000625299 PLA2G4CQ9UP65 541 aa15.37■□□□□ 0.05
PNKP-218ENST00000625299 MTMR6Q9Y217 621 aa15.37■□□□□ 0.05
PNKP-218ENST00000625299 PLXNA2O75051 1894 aa15.37■□□□□ 0.05
PNKP-218ENST00000625299 KNTC1P50748 2209 aa15.36■□□□□ 0.05
PNKP-218ENST00000625299 FAM47DPA6NHR8 397 aa15.36■□□□□ 0.05
PNKP-218ENST00000625299 CBX4O00257 560 aa15.36■□□□□ 0.05
PNKP-218ENST00000625299 POLR2DO15514 142 aaKnown RBP15.36■□□□□ 0.05
PNKP-218ENST00000625299 TIMM44O43615 452 aa15.36■□□□□ 0.05
PNKP-218ENST00000625299 PCDHGA12O60330 932 aa15.36■□□□□ 0.05
PNKP-218ENST00000625299 JUPP14923 745 aa15.36■□□□□ 0.05
PNKP-218ENST00000625299 CD27P26842 260 aa15.36■□□□□ 0.05
PNKP-218ENST00000625299 HNF1BP35680 557 aa15.36■□□□□ 0.05
PNKP-218ENST00000625299 RPS14P62263 151 aaKnown RBP15.36■□□□□ 0.05
PNKP-218ENST00000625299 SEMG2Q02383 582 aa15.36■□□□□ 0.05
PNKP-218ENST00000625299 INCA1Q0VD86 236 aa15.36■□□□□ 0.05
PNKP-218ENST00000625299 CUL4BQ13620 913 aa15.36■□□□□ 0.05
PNKP-218ENST00000625299 ZNF394Q53GI3 561 aa15.36■□□□□ 0.05
PNKP-218ENST00000625299 PRAMEF14Q5SWL7 426 aa15.36■□□□□ 0.05
PNKP-218ENST00000625299 C6orf118Q5T5N4 469 aa15.36■□□□□ 0.05
PNKP-218ENST00000625299 PPP1R26Q5T8A7 1209 aaPredicted RBP15.36■□□□□ 0.05
PNKP-218ENST00000625299 SHC4Q6S5L8 630 aa15.36■□□□□ 0.05
PNKP-218ENST00000625299 LRRC69Q6ZNQ3 347 aa15.36■□□□□ 0.05
PNKP-218ENST00000625299 CHST9Q7L1S5 443 aa15.36■□□□□ 0.05
PNKP-218ENST00000625299 TMPRSS12Q86WS5 348 aa15.36■□□□□ 0.05
PNKP-218ENST00000625299 GATAD2AQ86YP4 633 aa15.36■□□□□ 0.05
PNKP-218ENST00000625299 CPXM2Q8N436 756 aa15.36■□□□□ 0.05
PNKP-218ENST00000625299 GANCQ8TET4 914 aa15.36■□□□□ 0.05
PNKP-218ENST00000625299 DUSP16Q9BY84 665 aa15.36■□□□□ 0.05
PNKP-218ENST00000625299 SLC2A11Q9BYW1 496 aa15.36■□□□□ 0.05
PNKP-218ENST00000625299 ZSCAN16Q9H4T2 348 aaPredicted RBP15.36■□□□□ 0.05
PNKP-218ENST00000625299 MAGEF1Q9HAY2 307 aa15.36■□□□□ 0.05
PNKP-218ENST00000625299 OSGEPQ9NPF4 335 aa15.36■□□□□ 0.05
PNKP-218ENST00000625299 USP3Q9Y6I4 520 aa15.36■□□□□ 0.05
PNKP-218ENST00000625299 AK5Q9Y6K8 562 aa15.36■□□□□ 0.05
PNKP-218ENST00000625299 ASH1LQ9NR48 2969 aaKnown RBP15.35■□□□□ 0.05
PNKP-218ENST00000625299 E9PAM4 449 aa15.35■□□□□ 0.05
PNKP-218ENST00000625299 C1QL1O75973 258 aa15.35■□□□□ 0.05
PNKP-218ENST00000625299 HOXD9P28356 352 aaPredicted RBP15.35■□□□□ 0.05
PNKP-218ENST00000625299 HLA-FP30511 346 aa15.35■□□□□ 0.05
PNKP-218ENST00000625299 CTSKP43235 329 aa15.35■□□□□ 0.05
PNKP-218ENST00000625299 YWHAGP61981 247 aaKnown RBP eCLIP15.35■□□□□ 0.05
PNKP-218ENST00000625299 DNAJC3Q13217 504 aa15.35■□□□□ 0.05
PNKP-218ENST00000625299 TTC31Q49AM3 519 aaPredicted RBP15.35■□□□□ 0.05
PNKP-218ENST00000625299 MPPE1Q53F39 396 aa15.35■□□□□ 0.05
PNKP-218ENST00000625299 GRAMD1CQ8IYS0 662 aa15.35■□□□□ 0.05
PNKP-218ENST00000625299 ZNF276Q8N554 614 aa15.35■□□□□ 0.05
PNKP-218ENST00000625299 PLD4Q96BZ4 506 aa15.35■□□□□ 0.05
PNKP-218ENST00000625299 SLC6A18Q96N87 628 aa15.35■□□□□ 0.05
PNKP-218ENST00000625299 ACE2Q9BYF1 805 aaPredicted RBP15.35■□□□□ 0.05
PNKP-218ENST00000625299 TMEM245Q9H330 911 aa15.35■□□□□ 0.05
PNKP-218ENST00000625299 MMRN2Q9H8L6 949 aa15.35■□□□□ 0.05
PNKP-218ENST00000625299 APOBEC3GQ9HC16 384 aaKnown RBP15.35■□□□□ 0.05
PNKP-218ENST00000625299 ABCB8Q9NUT2 735 aa15.35■□□□□ 0.05
PNKP-218ENST00000625299 PVALEFA0A1B0GWK0 134 aa15.34■□□□□ 0.05
PNKP-218ENST00000625299 ENC1O14682 589 aa15.34■□□□□ 0.05
PNKP-218ENST00000625299 CUTAO60888 179 aa15.34■□□□□ 0.05
PNKP-218ENST00000625299 PPP6R2O75170 966 aa15.34■□□□□ 0.05
PNKP-218ENST00000625299 NR3C1P04150 777 aa15.34■□□□□ 0.05
PNKP-218ENST00000625299 ABCB4P21439 1286 aa15.34■□□□□ 0.05
PNKP-218ENST00000625299 ARHGAP18Q8N392 663 aa15.34■□□□□ 0.05
PNKP-218ENST00000625299 WFIKKN2Q8TEU8 576 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms